current user: public

Please be advised that we have recently moved our server to a new location. We tried our best to fully test all functions on the website, but if something does not work for you please let us know.

Query: gi|60682315|ref|YP_212459.1| hypothetical protein (BF2845) [Bacteroides fragilis NCTC 9343] (Range: 1-207), from B.fragilis

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .
# Score Template Links and tools%idFirst MLIILKQDDSCQVAQTTCTTNSLEIRYKDYSVLKKTLDLNTKSINSNSCIELIIYGTHGNEKEICKLTKPDIKDLSYFFKGKVCRLVLDACHSACHIPHFKEMLTDDGIILCHVGICQVNSIETKTGKDTYERWINGNKEGLKVWSDGIVPAIYTRKNNTLTYYECSKFEVDINHPFTGTEFKTYCLNLKSKGIKMVIKNHSDFDKILast
1 -6.640sp|Q9H761|CN139_HUMAN Uncharacterized protein C14orf139 OS=Homo sapiens GN=C14orf139 PE=2 SV=1  ali follow..  16  1...................................MVQQDVQGLKAQSASQHLLSGCHGNPTTLSSRETAIIRRDLGFPRGSLKRLLLSSATRNTRPAHPQHLCGDEG------------------QSPTVPLPVLMRKGGKKTYPERLQYGHDTFKKPVLWSHDQKPECGEGQQPASEQPARRGVVNL.................. 148
2 -6.170sp|Q6W4X9|MUC6_HUMAN(removed signalp:1-22) Mucin-6 OS=Homo sapiens GN=MUC6 PE=1 SV=2 (Range: 601-900)  ali follow..  13  163.......APTCQMLATGVACVPTKCEPGCVCAEGLYENAYGQCVPPEEC-------FSGVSYPGGAELHTDCRTCS-CSRGRWACQQGTHCPSTCTLYGEGHVITFDGQRFVFDGNCEYILATDVCGVNYSQPTFKILTENVICGNSGVT......................................................... 300
3 -6.060sp|Q9NQ38|ISK5_HUMAN(removed signalp:1-22) Serine protease inhibitor Kazal-type 5 OS=Homo sapiens GN=SPINK5 PE=1 SV=2 (Range: 151-450)  ali follow..  13  127.....QYQNQAKNGILFCTRENDPIRGPDGKMHGNLCSMCQAYFQAENEEKKKAEAR-------ARNKRESGKATSYAELCSEYRKLVRNGKLAC--RENDPIQGPDGKVHGNTCSMCEVFFQAEEEEKKKKEGKSRNKRQSKSTASFEELCSEYRKSRKNGRLFCTR----ENDPIQGPDGKMHC..................... 298
4 -5.820sp|P01308|INS_HUMAN(removed signalp:1-24) Insulin OS=Homo sapiens GN=INS PE=1 SV=1  ali follow..  22  65...................................................................................RGIVEQCCTSICSLYQLEN--------YCN.............................................................................................. 86
5 -5.740sp|Q9P2C4|TM181_HUMAN Transmembrane protein 181 OS=Homo sapiens GN=TMEM181 PE=1 SV=2 (Range: 1-300)  ali follow..  16  123.....YRELKEDLTPFKDDRYYRLAPMRLYTLSKRHF---LVFVVFFICFGLTIFGIRG----------PKVIQTSAANFSLNNSKKLKPIQLSNPLSTYNQQL-----LTCVVELDQSKETSIKTSFP-----MTVKVDGVA--QDGTTMYIHNKVHNRTRTLTCAG-EIIVAH-LGYLNYTQYTVIVGFEHLKLPIKG....... 297
6 -5.580sp|P02765|FETUA_HUMAN(removed signalp:1-18) Alpha-2-HS-glycoprotein OS=Homo sapiens GN=AHSG PE=1 SV=1  ali follow..  10  1.............APHGPGLIYRQPNCDDPET-EEAALVAIDYINQNL--------PWGYKHTLNQID--EVKVWPQQPSGELFEIEIDTLETTCHVLDPTPV-EHAVEGDCDFQLLKLDGKFSVVYAKDVRKVCQDCPLLAPLNDTRVVHAAFNAQNNGSNFQRAQLVPLPPSTYVEFTVSGTDCVAKEATEAA............ 199
7 -5.520sp|Q6ZRI0|OTOGL_HUMAN(removed signalp:1-22) Otogelin OS=Homo sapiens GN=OTOG PE=2 SV=3 (Range: 1951-2250)  ali follow..  12  136..........................................................................................CACRCSIFPDLSFVTFDGSHVALFKEAIYILSQPDEMLTVHVLDCKSANLGHLNWPPFCLVMLNMTHLAHQVTIDRFNRKVTVDLQPVWPPVSRYGFRIEDTGHMYMILTPSDI... 250
8 -5.460sp|P23945|FSHR_HUMAN(removed signalp:1-17) Follicle-stimulating hormone receptor OS=Homo sapiens GN=FSHR PE=1 SV=3 (Range: 1-300)  ali follow..  14  1..........CHHRICHCSNRVFLCQESKVTEIPSDLPRNAIELRVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNL-----------PKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKV-LLDIQDNINIHTIE--------RNSFVGLSFESVILWLNKNGIQEI.......... 168
9 -5.450sp|P0C5K7|CT62_HUMAN Cancer/testis antigen 62 OS=Homo sapiens GN=CT62 PE=2 SV=1  ali follow..  25  19......................................................................................................................................................PSAYSHTHRTFSHFSCQRLHVELWNADLQSEFLCPCLGL.................. 63
10 -5.450sp|P36957|ODO2_HUMAN Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial OS=Homo sapiens GN=DLST PE=1 SV=4  ali follow..  14  328VVPVIRNVEAMNFADIERTITELGEKARKNELAIEDMDGGTFTISNGGVFGSLFGTPIINPPQSAILGMHGIFDRPVAIGGKV-HRLIDGREAVTFLRKIKAAVEDPRVLLLDL............................................................................................. 453

FFAS is supported by the NIH grant R01-GM087218-01
1 3 0 4 6 4   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Godzik A. Fold recognition methods. Methods Biochem Anal. 2003;44:525-46. Review.