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Query: gi|60680875|ref|YP_211019.1| hypothetical protein (BF1359) [Bacteroides fragilis NCTC 9343] (Range: 1-245), from B.fragilis

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MMCELGYFISSYRLNPYKFRFFPISNYRIHRSGMIFLLYFCCKPKKNIMKKILFILFTVQFILIPRITGSYGANSIGNNHGHSVTNQGKKTIKKDIFGDTVIEDNHGNRKTIKKDIFGDTVIEDNRGNRKTIRKDIFGDTVIEDNRGNRKTIKKDIFGDTVIENNCGNRKTIKKDIFGDTVIEDNRGNRKSIKKDIFGNTVIENNKGYKKTIKTDIFGNKIIEDNHGKKQIIKKDIFGNVIIENYLast
1 -9.770PB023339 Q8A4U7_BACTN/1-171 PB023339; Pfam-B_23339;  ali follow..  10  30.........NNFITNEEKVVVSKVIYRLDGSLYRHMKYDFTYDDQKRVTAKEAFKWDSSTEKWIPYFKIDYAYSSNEITLVYARWNNSHRAYDDSVEKSVYELNDANMPIAYMNYKWNDYKWIEE--SAGNWAMNIQTPVTDE...................................................................................................... 164
2 -2.670PB042013 A7V626_BACUN/1-162 PB042013; Pfam-B_42013;  ali follow..  21...........................................................................................................................NAQESAEFRPAELAGQLCHYVSEIPDVPGILKPSNTFKVLSDDGRIVNFTMIPGKDAIITGQQLTDNSYKESIEKNIHLPMLDHKDNILEFEIGDDGVMYLKYFIAKDLNGNELNTWFHETW 148
3 -1.460HGC00593 gi|162858151|dbj|BABB01011554.1|1.0 TMP00709;  ali follow..  3MTDNNDDVLVKKFFSENRIDVPDDG----FSRRVMRRLPDRTRRISRLWTAVCVVIGLLIFFRNKG................................................................................................................................................................................... 64
4 -1.060PB006205 Q3F123_BACTI/1-181 PB006205; Pfam-B_6205;  ali follow..  86GADKYGKSLFSFVRSWITFRLRKH-------------------SRLVNVPKLKKHVFYGHVCVQHDVKDLPIVHSFSEEENDIHAYDVTFLPQKEEVEYVEKDEQTTIKA....................................................................................................................................... 181
5 -0.605PB144506 _Gut.Meta.Jp.0101058_ gi|162866171|dbj|BABB01003836.1||1 (- 121:946~0 complete)  ali follow..  11  113..........................................................YVIEGSSKTLKYLKTSGPMDFEAQNAFSEDQLEIKISGSSDVKFPNVKLRLGEFSVSGSGDLVFADLDCKNLTSKVSGSGDITLKGK.................................................................................................... 200
6 -0.538HGC01056 gi|162659434|dbj|BAAX01000171.1|2.0 TMP01455;  ali follow..  22........................................................................................................................................................HNETYADQRDRELDSINAFLRNENIKVINEAEFEKRFEARKAGDKAVKLTDTDPNNNEYVLFESNG-QVINDGCGDYIAKGKTQ---NVLCRF 113
7 -0.472PB003645 Q65HI2_BACLD/1-230 PB003645; Pfam-B_3645;  ali follow..  12  73..............................................................VQSGEGEKEVFKPASDDKPKESIQDYEQEYENQLKDILETIIGVEDSIVVNVDATSLKIFEKNRKTQETSTNET------DKQGGKRTVSEMSSDEEIVIIKNGDKETPVKPDIRGVLVVAQGVDNVQI...................................................... 201
8 -0.422PB044863 Q5LB69_BACFN/1-105 PB044863; Pfam-B_44863;  ali follow..  15  1........MYTIQANPSGTRSMEISEENLVTIEKYSLFQHLIDSNG....................................................................................................................................................................................................... 38
9 -0.406HGC00762 gi|162641591|dbj|BAAX01018014.1|1.0 TMP00997;  ali follow..  1........MTPYKV---SHQLKKLNNSSSLTKKNMTMEENTVHPARKLLLGQLIAYLLQAVA....................................................................................................................................................................................... 51
10 -0.321PB030138 Q7MX14_PORGI/1-113 PB030138; Pfam-B_30138;  ali follow..  16......DHKPIY-YDQRRDELEKRIERIRREVEQEEQAELDGQSSSHDYSGYRP............................................................................................................................................................................................... 62

FFAS is supported by the NIH grant R01-GM087218-01
1 2 6 4 6 7   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Rodrigues AP, Grant BJ, Godzik A, Friedberg I. The 2006 automated function prediction meeting. BMC Bioinformatics. 2007 May 22;8 Suppl 4:S1-4.