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Query: gi|60681243|ref|YP_211387.1| hypothetical protein (BF1751) [Bacteroides fragilis NCTC 9343] (Range: 1-157), from B.fragilis

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MDKEQFKSIVHPVMKANSFRRKGNSWYKTTAECIVVFNLQHSLYGKMFYINLAALLRKGDDLLFPKEYQCDIRMRFPIMEIEGYSTQMILDLESTIDEQLRSRLIENIINISIPILQKLESIDGIIELYGEKPELNNIYPFSSILYRKEMNNKLKAILast
1 -5.000PB047496 gi|150008556|ref|YP_001303299.1| hypothetical protein BDI_1942 [Parabacteroides distasonis ATCC 8503]gi|149936980|gb|ABR43677.1| conserved hypothetical protein [Parabacteroides distasonis ATCC 8503]  ali follow..  79LAATEAEKKMKEYCAKVGIVEGVFNYVFNSDSTF-TSALKRGSLKGTYSVSVTLRYTVGNKKLTVSTLTAHVVLSGNELT---------LLFNADKLLKFLSTVSSISSNTTLKAINKLAS.................................... 194
2 -3.160PB010473 Q8A4J5_BACTN/121-234 PB010473; Pfam-B_10473;  ali follow..  7LEAMEINKGAGNPLEFKGLKSQYLFIFAGGAVLLVVVILYIAGVNQWICIPFGL....................................................................................................... 64
3 -2.600HGC00915 gi|162810474|dbj|BABA01034235.1|2.0 TMP01234;  ali follow..  23  1MSKKK-DNILKKVGKKNSFKVPEGYFENLTSEVMGKLPEKEGP.................................................................................................................. 51
4 -2.400HGC00422 gi|163631722|dbj|BABG01004545.1|2.0 TMP00397;  ali follow..  154.GMYLSHDAAKGVIETYGMER----------SMVLSNTVQLQDWDGRY-----------------SRRNKEWAKTIPNDNPETVRCGYALNSHPAVLDGFIDLVREEQQRSRTQREKLEPSRPSVRDKLKQEL........................ 259
5 -2.270PB004476 gi|139436894|ref|ZP_01771054.1| Hypothetical protein COLAER_00025 [Collinsella aerofaciens ATCC 25986]gi|133776541|gb|EBA40361.1| Hypothetical protein COLAER_00025 [Collinsella aerofaciens ATCC 25986]  ali follow..  11  290LDTSQISSWAAELANGFNTVGSTRWWTRADGK---QCAVEGGDFG................................................................................................................ 331
6 -2.180HGC00593 gi|162858151|dbj|BABB01011554.1|1.0 TMP00709;  ali follow..  19  8.DDVLVKKFFSENVPDDGFSRR....................................................................................................................................... 31
7 -2.150PB048631 gi|160885545|ref|ZP_02066548.1| hypothetical protein BACOVA_03545 [Bacteroides ovatus ATCC 8483]gi|156109167|gb|EDO10912.1| hypothetical protein BACOVA_03545 [Bacteroides ovatus ATCC 8483]  ali follow..  17  1MKIKFLS-FFMVSFVITSCLDDDNNIEYSPDATIHAFALDTAGLGSKFTID.......................................................................................................... 55
8 -2.020HGC00683 gi|163310582|dbj|BABD01000118.1|4.0 TMP00861;  ali follow..  108SSSLVVPRAVRETIAAKGKKDDVKLFDWSDRNDYFYVEFDEPDSELLINFDGTLY...................................................................................................... 163
9 -1.980PB005346 A0R807_PELPD/1-258 PB005346; Pfam-B_5346;  ali follow..  128LEHHLSHPGIRTLLHKAGYKDD-----ADCEGMLLELR-SRIGGNNSFPHEIGLFI------------GYPAKDVAAFMGLVRLPFLWKIYGNPARSLALAEQY-RCCRNKMGAILARGTSKTLEIDRSDH.......................... 243
10 -1.970PB018258 Q7MT99_PORGI/1-157 PB018258; Pfam-B_18258;  ali follow..  122......QDYIRDSFVRAGFSSDLIRYDAMVYMY............................................................................................................................ 148

FFAS is supported by the NIH grant R01-GM087218-01
1 2 6 4 6 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Rodrigues AP, Grant BJ, Godzik A, Friedberg I. The 2006 automated function prediction meeting. BMC Bioinformatics. 2007 May 22;8 Suppl 4:S1-4.