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Query: gi|60681337|ref|YP_211481.1| hypothetical protein (BF1846) [Bacteroides fragilis NCTC 9343] (Range: 1-71), from B.fragilis

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70
# Score Template Links and tools%idFirst MFDNYAALSYNERENDFINIIIIYNTASYFISHLKMFLSFFIFRNKEKVYECNTLINNTLLNIDSETLSETLast
1 -4.360HGC00857 gi|162620543|dbj|BAAW01002606.1|2.0 TMP01139;  ali follow..  17  1.MLNFHSKKVMCIQQEIYARMIMYNFVQMITSHVVI................................... 35
2 -4.150PB014033 A5ZI39_9BACE/1-158 PB014033; Pfam-B_14033;  ali follow..  18  33......ALSFTEAEARIIEEMTPFISGEFTVSDIKRANYSELFPSDEESADRWFKCKLIFITLDEKSGAE. 96
3 -3.840HGC01215 gi|162843249|dbj|BABA01001460.1|3.0 TMP01713;  ali follow..  14  1................LVGVFCVEGSVDVFIVHIREICFPVLF............................ 28
4 -2.850PB048420 Q64S71_BACFR/1-165 PB048420; Pfam-B_48420;  ali follow..  22  1...................................MEIQFVIVRSENAEYLCH---NGTYVDVSDPSTEFV 35
5 -2.500PB069407 _HOMD.0084606_ pint_c_2_12 Prevotella intermedia 17 [3585 - 4295] ORF  ali follow..  16  181LVEVYFIQQSFSLAGQPIDIAGSLDFPNGLFEIPFIFIIYEIFAIGVRMREENQL................ 235
6 -2.450PB007843 JCVI_PEP_1096682172521 /source_dna_id=JCVI_ORF_1096682172520 /offset=0 /translation_table=11 /length=152 /full_length=152  ali follow..  21  83........PADELEAYFFDVFQDYDEERVYPSDIKKIIQWY-----------NILAEKVPQVFKAETAEEE 134
7 -1.690PB000520 Q9RVX4_DEIRA/1-194 PB000520; Pfam-B_520;  ali follow..  11  21......AVTLKRMPQPVTALLAAMITPAVLISGAGTLIMSTSTRVGRATDRVRGLTSR............. 72
8 -1.480PB001030 Q6D4H5_ERWCT/1-146 PB001030; Pfam-B_1030;  ali follow..  12  71.........YQPARREAIKAIMRWSGPRMLLRHPILAIRHLIDDHRPV....................... 109
9 -1.450PB071107 _Gut.Meta.Jp.0066071_ gi|162701604|dbj|BAAY01026246.1||2 (+ 344:749~0 complete)  ali follow..  16  1.................................MKRFASHFLFLPAYG------YLKQYAVETEEGSVVR. 31
10 -1.380HGC01179 gi|162738527|dbj|BAAZ01025469.1|2.0 TMP01658;  ali follow..  14.......LNNERGEANYFSTVVFIFIAVLLLAFIIDLFSIISTKQELDHAADQMV................ 61

FFAS is supported by the NIH grant R01-GM087218-01
1 2 6 4 9 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.