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Query: gi|60682801|ref|YP_212945.1| nicotinate phosphoribosyltransferase (BF3334) [Bacteroides fragilis NCTC 9343] (Range: 1-388), from B.fragilis

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MIIRTILDTDLYKFTTSYAYIKLFPYAIGTFSFKDRDGTEYSDEFVERLRTEISQLSHVALTEKELEYMIKNCRFLPRVYWEWLSSFRFQPEKIEIRLDENRQLHIEVNDYLYKATLYEVPLLAIVSEIKNQSSGNVANLEDILYKLSEKTELSNKHQLLFSEFGTRRRFSFDVQNQVIGHLKQTAHYCIGTSNCHFAMKYGMKPMGTHPHEWFMFHGAQFGYKHANYMALENWVNVYDGDLGIALSDTYTSAIFLSNLSRKQAKLFDGVRCDSGDEFRFIDQLTARYKELGIDPTTKTIVFSNALDFDKALDIQEYCQGKIRCSFGIGTNLTNDTGFKPSNIVMKLSQCKMNMNQEWRECVKLSDDIGKHIGSPEEVRACLYDLRLELast
1 -3.090HGC00509 gi|162658693|dbj|BAAX01000912.1|3.0 TMP00561;  ali follow..  16  23..........................................................................................................................................................................................................................................................................LIGKRKDEDDMAKSTKTYEERIEQESIEATKKLIAQRKELEKRKKAEESKKRTHRLCQ---IGGAVESVLGCPIEE-LPKLIGFLKRQETNGKFFSKAMQK..................... 127
2 -2.440PB034883 _HOMD.0130261_ bfor_c_1_4664 Tannerella forsythia ATCC 43037 [1809083 - 1810348] ORF  ali follow..  136...............................EAMYKRHKNSSTSILVNWKRAMDFLKNLPFFKIDNAFAEE--------YKRFLLT.............................................................................................................................................................................................................................................................................................................. 187
3 -2.230HGC00789 gi|163310627|dbj|BABD01000073.1|7.0 TMP01036;  ali follow..  15  61LDIIYDEGADLYNMRFYRR-----TFSKKTFECKTKDIAVHEGIYFDMLEEMFTMVTGLYTR...................................................................................................................................................................................................................................................................................................................................... 117
4 -1.650HGC00422 gi|163631722|dbj|BABG01004545.1|2.0 TMP00397;  ali follow..  11  2IMNATDWNTALFKMSDEQDKFRDWLKSQPPEEILHHT--------YTVREDIVMAMEQLELTDAQAQALLDSPTPLADVYRYFEKLETGHMDVIRDSIENRADDVCRAKEELRTTPIYPHSALEQYRASNNVNRQCKESIEAAVREHFDGMYLSHDAAKGVIEYGMERVQLQDWDGRYSRRNKEWAKTIPNDNPETVRCGYALN-----SHPAVL............................................................................................................................................................................. 223
5 -1.650PB017124 _Gut.Meta.Jp.0039711_ gi|162659581|dbj|BAAX01000024.1||2 (+ 385:1498~0 complete)  ali follow..  1.................................................................................................................................................................................................................................................................................ASAQAKQTVKVLEYCPAPGQFTNKLPEINNTMSAEERLKACEEQLEDGNLVCLGAGGYITVALDQPIKNG-SDIRILGNAFYSANDPIVYVGVG..................... 110
6 -1.630PB034180 _Gut.Meta.Jp.0112129_ gi|163310377|dbj|BABD01000320.1||2 (+ 509:1679~0 complete)  ali follow..  10  18...TAVQPSDSYFVNLSNKLYGACTLTTLPDIFRKK-----GMYIAAYLEDQISELKYLPFYPTNSNYVADEINEEDIRFIIW-NTWQKAASLHEKTYINPNEHAIKEQAGIFYGILEEAYENAPENE----SLNHYFDHPGTAVEADRKLTWLFGHSYLTEP----SMLPYIEQIAPNDRFIVPVGPLALFLHEWISLLTTSDAWKQINGLFTGNPEIPQEIQDKNREIYRNFIEGTNGKRIVYLNGYTELRRFLVNVLK-MTEPEKGVLLAKDICEYIADRENPLYDSERAQANAFRMLTEEMLCPPDLLVHCINNKLIPDAQLP-EKELVQQ..................................................... 372
7 -1.590HGC00672 gi|162843654|dbj|BABA01001055.1|4.0 TMP00845;  ali follow..  10  31..........................................................................................................................................................................................................................................................................YMSMRLQQKAENRNFIETYTITLTKGFAGDSTSIFINDSLEEPFILEVKRFAEQSALMIVNNATEKLSLFELSEQGGEYRFEKEGEEVKPTGAGIKKLSKE..................... 139
8 -1.470HGC00915 gi|162810474|dbj|BABA01034235.1|2.0 TMP01234;  ali follow..  10  1................................................MSKKKRGEERMKEEDNILKKVGKKNSFVPEGYFENLTSEVMGKLPEKEGPAFEEVKQPMMWIRMKPLLYMAAMFIGAALIIRVASSNHQPTTAGDHLTANEAATEVVSDE...................................................................................................................................................................................................................................... 111
9 -1.470PB048276 _Gut.Meta.Jp.0112258_ gi|163310311|dbj|BABD01000385.1||2 (- 258:885~0 complete)  ali follow..  11  4.................................................................................................................QIKLSETVMVIDVAYLNFVINDLRKYFEPLLGRSLQTVDLALFTMYLAMDAGLKGSDNDVQVLLVYDKQSGKLEHCLPSD--LKNELDGVAFKASLGEFSFMAAEGFVSRGDLYLDLLQIVLNAAEVKKLIVVPFNEEYGKEVENVLRECALENAGHKEEAKDIVYFRMEEPAAPAVCRWEMLGYPLMSVLGIRSE............................................................................... 199
10 -1.260HGC00962 gi|162759780|dbj|BAAZ01005693.1|3.0 TMP01305;  ali follow..  10  1MYFGAILCKKARQLRVYKAFGGRRHTEGRCSSIDENGKSRHSVWLSDDVWQEVDAFYKLDNCPIRNEFAEKALRQ----YCGRLHAERTGAYLPRALQGVLEGTLGVFGERLGRLLLKLAVEHNMTNHLLGGDMDMTRDEYSKMRGSSVREVSATHGTISFKD................................................................................................................................................................................................................................. 159

FFAS is supported by the NIH grant R01-GM087218-01
1 3 0 6 1 2   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ma H, Xiong H, Liu T, Zhang L, Godzik A., Zhang Z. Aggregate formation and synaptic abnormality induced by DSCR1. J Neurochem. 2004 Mar;88(6):1485-96.