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Query: gi|60683563|ref|YP_213707.1| putative SufE Fe/S-cluster-related protein (BF4142) [Bacteroides fragilis NCTC 9343] (Range: 1-142), from B.fragilis

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140
# Score Template Links and tools%idFirst MSINELQDEVVAEFSDFDDWMDRYQLLIDLGNEQEPLDEKYKTEQNLIEGCQSRVWLQADEVDGKIIFKAESDALIVKGIIALLIKVVSGHTPDEILNSELYFIDKIGLKDHLSPTRSNGLLSMVKQMRMYALAFKAKEAKGLast
1 -4.380PB044822 Q89ZL7_BACTN/1-147 PB044822; Pfam-B_44822;  ali follow..  14  21.........................................KYVCGCDQTAVTDIHLQPDQTSGQLTIYNDDDEELANVMIEEWATYDGDDFMENVKPN---------LKSTLCRMKDAGDFDKVTILKPYSFVLVDEDKE. 111
2 -3.980PB012771 _Gut.Meta.Jp.0094636_ gi|162817068|dbj|BABA01027641.1||1 (+ 249:636~0 complete)  ali follow..  10  59........................................................................VRLIWADELAALLESVQRECEEREAVLVREMAEAEGVNEEMKGNEQMAWVQRMEMICGRVEEVVCEE... 125
3 -3.300PB022506 Q11RP6_CYTH3/1-298 PB022506; Pfam-B_22506;  ali follow..  189........................................................VFIQVEQYFLTIIVKQGKKL------IFCNSFTFNTSEDFVYFILFVFDQLELNPEKCPVVVFGEITHDSESFSKLYKYIRH.... 264
4 -3.280PB044863 Q5LB69_BACFN/1-105 PB044863; Pfam-B_44863;  ali follow..  20  9........................................................................................SGTRSMEISEENLVTIEKYSLFQHLIDSNGIVDEAVLEKLKLNIRSLIASQEE. 61
5 -3.140PB018258 Q7MT99_PORGI/1-157 PB018258; Pfam-B_18258;  ali follow..  11  63.................................................GCK--------------AFADNTPVLFAHGITHL----YDELPHHAVQSLKHRLLTYFGKTTYITIQEQDYIRDSFVR............... 131
6 -3.130PB007147 Q11UU2_CYTH3/1-245 PB007147; Pfam-B_7147;  ali follow..  19....KNIQKIVDWILTIEDREQRTRYANTCVELMRQLNPGVRDTEE-----TTKLW-------DHLFIMSNFKLDV--------------DTPYPMPDIAVLGRKPERVPYNHNKLKYKHYGKNINLLIEQAILKEDGAEK. 130
7 -2.990HGC00267 gi|163310129|dbj|BABD01000566.1|6.0 TMP00066;  ali follow..  12  1MDEKEVSEMQEEMMTVLVVEPMKAPYVKHIPNELEDLQQAVGGDIEMTYPFDDEVGILLNGNNRALYDDHGQVYDAIAGTFLVV-----GLTEDDFTSLTPEQIEKF................................... 110
8 -2.910HGC00965 gi|163282470|dbj|BABD01028218.1|2.0 TMP01310;  ali follow..  93..RTAVAQYLNDAYNAEPERWSAHPSILDCEPWTPPAPEPDAETQH................................................................................................ 136
9 -2.600PB012823 Q5LCS8_BACFN/1-272 PB012823; Pfam-B_12823;  ali follow..  10  27..............................KGQQPSEENEDPKAKEILQG----IWLDDETETPLMRIIGDT...................................................................... 64
10 -2.570PB036876 Q56VH6_BACFR/1-141 PB036876; Pfam-B_36876;  ali follow..  10  1MKTTDHFKRTIQMY------------LEQRAAEDALFAKNYRNPAKNIDDCVT--YILNYVQKSGCNGFTDGE..................................................................... 59

FFAS is supported by the NIH grant R01-GM087218-01
1 2 6 5 0 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.