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Query: gi|60680547|ref|YP_210691.1| hypothetical protein (BF1003) [Bacteroides fragilis NCTC 9343] (Range: 1-117), from B.fragilis

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .
# Score Template Links and tools%idFirst MADVKEKINLLDVIPFRSENITAEKGSDGTVTIAFPRFKYEWMRRFLLPKGMSADIHVRLEDHGTAVWELIDGKRTVRRIIEELAEHFNYEENYESRITAYITQLQKDGFVKLVIENLast
1 -6.520tr|B7Z293|B7Z293_HUMAN Uncharacterized protein OS=Homo sapiens GN=ZMYND11 PE=2 SV=1 (Range: 1-99)  ali follow..  20  18..................................................................LWAAIEIIRNIDRITKYMSRVHGMHPK---ETTRQLSLAVKDGLI...... 65
2 -6.250sp|Q12789|TF3C1_HUMAN General transcription factor 3C polypeptide 1 OS=Homo sapiens GN=GTF3C1 PE=1 SV=4 (Range: 872-1055)  ali follow..  57............................................................DNLEEFLNDPLKKHTLIRFLPRPIRQQLLYKRRYIFSVVENLQRLCYMGLLQFGPTE 113
3 -6.250sp|Q9UIF9|BAZ2A_HUMAN Bromodomain adjacent to zinc finger domain protein 2A OS=Homo sapiens GN=BAZ2A PE=1 SV=4 (Range: 1421-1503)  ali follow..  15  19...................................................................WWWIRDPEMLDAMLKALHPRGIREKALHKHLNKHRDFLQE.......... 58
4 -6.000sp|P41214|EIF2D_HUMAN Eukaryotic translation initiation factor 2D OS=Homo sapiens GN=EIF2D PE=1 SV=3 (Range: 264-355)  ali follow..  42.....................................................................................RQLDIKKSSYKKLSKFLQQMQQEQIIQVKELS 73
5 -5.900sp|Q9UIF8|BAZ2B_HUMAN Bromodomain adjacent to zinc finger domain protein 2B OS=Homo sapiens GN=BAZ2B PE=1 SV=3 (Range: 1706-1785)  ali follow..  12  13...................................................................WWRIIDPEDLKALLKVLHLRGIREKALQKQIQKHLDYITQ.......... 52
6 -5.870sp|Q9NU22|MDN1_HUMAN Midasin OS=Homo sapiens GN=MDN1 PE=1 SV=2 (Range: 453-511)  ali follow..  14  9............................................................ATLLDKYWTKIHDNLDKRELNEVLQSRYPSLLAVVDHLLDIYIQLTG.......... 56
7 -5.710sp|Q9UJX4|APC5_HUMAN Anaphase-promoting complex subunit 5 OS=Homo sapiens GN=ANAPC5 PE=1 SV=2 (Range: 354-458)  ali follow..  11  1...RSDSYVLLEHSVKKAVHFGLPYLASLGIQSLVQQRAFAGKTANKLMDALKDSDLLHWKHQKTAIWRLY-GRSTMALQQAQMLLSMNSLEAVNAGV................... 105
8 -5.440sp|Q92794|KAT6A_HUMAN Histone acetyltransferase KAT6A OS=Homo sapiens GN=KAT6A PE=1 SV=2 (Range: 1-73)  ali follow..  15  13..................................................................ILEAIKKVKSEERICNAVSSSHGLDRK---TVLEQLELSVKDGTI...... 60
9 -5.420sp|P58107|EPIPL_HUMAN Epiplakin OS=Homo sapiens GN=EPPK1 PE=1 SV=2 (Range: 1773-1840)  ali follow..  16  16..........................................................RFADQVVSFWDLLSSPYFTEDRKRELIQEYGAQSGGLEKLLEIITTTIEE......... 65
10 -5.340sp|Q8TF65|GIPC2_HUMAN PDZ domain-containing protein GIPC2 OS=Homo sapiens GN=GIPC2 PE=1 SV=1 (Range: 217-315)  ali follow..  18  47............................................................IDLATTMFEAGKDKVNPDEFAVALDEDFAFPDEFVFDVWGVIGDAKRRGL....... 99

FFAS is supported by the NIH grant R01-GM087218-01
1 3 0 4 6 4   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Godzik A. Fold recognition methods. Methods Biochem Anal. 2003;44:525-46. Review.