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Query: gi|60682029|ref|YP_212173.1| putative bifunctional CbiF/CbiG cobalamin biosynthesis protein (BF2549) [Bacteroides fragilis NCTC 9343] (Range: 1-599), from B.fragilis

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKTAIIVISEAGIALAKTLEQELPESEIFSTGTDTDCHSISNLQEAVPEIFHKFDAIIFIGAMGICIRAIAPHIEDKHKDPAVVCVDSTGRYAVSVLSGHIGGANGLTRYVASILGAEPVITTRSDRTGLWALDTLGKKYGWQTVPAESSDMNHLITLFVDCKPTALLLDIRDEGTTQLEHTLPPHVDVFYKFEDMDLRKYDLLLLVTPFIYNTSDTPALYYVPPVLHMGVGLARDAHPVDTVITHLMDVVVQANMIPLAIRTVSSIEEKKDEPVLKLLAEAYQTRLYTASQLSKIEVPTPSEVVNKHMGTPSVSEASALLSSGGGPLLLPKQKGANFTVAIAMDAASVRQGHIEIVGAGPGDPELISVRGRHFLEEADLILYAGSLVPRELTECAKAGATIRSSASMTLEEQFALMKEFYDRGQLVVRLHTGDPCIYGAIQEQMNFFDQYGMHYHITPGISSFQAAAAALQSQFTIPERVQTIILTRGEGRTPMPEKEKLSLLARSQSTMCIFLSAGVVDQVQRELLEHYPPTTPVAACYHLTWKDERIFRGQLQDLAKIVNENHLTLTTMIVVGDAIDNREGLSRLYSHQFKHLFRKLast
1 -5.120sp|Q5VW00|DC122_HUMAN DDB1- and CUL4-associated factor 12-like protein 2 OS=Homo sapiens GN=DCAF12L2 PE=2 SV=1 (Range: 359-463)  ali follow..  18  2...............................................................................................................................................................................................................................................................................................................................................................QHIITVGTGHGSLLFYDIRAQKFLEERASSSLDSMPGPAGRKLKLACGRDVWVNYFGGMGEFPNALYTHCYNWPEMKLFVAGGPLPSGLHG............................................................................................................................................................. 98
2 -4.770sp|Q8N9W5|CS051_HUMAN UPF0470 protein C19orf51 OS=Homo sapiens GN=C19orf51 PE=2 SV=3 (Range: 355-439)  ali follow..  16  19...............................................KSCYNGRFQLLYVACG--MVHLLIPELGACVAPGGNLIV-ELARYLVDVRQEQLQGFNTRVRELAQAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 84
3 -4.360sp|Q9UHP3|UBP25_HUMAN Ubiquitin carboxyl-terminal hydrolase 25 OS=Homo sapiens GN=USP25 PE=1 SV=4 (Range: 914-1055)  ali follow..  13  21.........................................KLNEQAAELFESGEDREVNNGLIIMNEFIVPFLVDEMEEKDILAVEDMRNRWCSYLGQEM--EPHLQEKLTDFL--PKLLDCSMEIKSFHEPPKLPSYSTHELCERFARIMLSLSRTPADGR.................................................................................................................................................................................................................................................................................................................................................................................................................................................... 142
4 -4.100sp|Q8TBP0|TBC16_HUMAN TBC1 domain family member 16 OS=Homo sapiens GN=TBC1D16 PE=1 SV=1 (Range: 291-376)  ali follow..  19  16..................................................................MRSLRLFFSDEACTSGQLVVASRESQ-YKVFHFHHGGLDKLSDVFQQ...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 61
5 -4.060sp|Q9H8Y5|ANKZ1_HUMAN Ankyrin repeat and zinc finger domain-containing protein 1 OS=Homo sapiens GN=ANKZF1 PE=1 SV=1 (Range: 165-237)  ali follow..  19  1........................................................VLFQNAQGQFLYAYRCVLGPHQDPPENLQSRGPRDCVVLMAAGHFAGA---------IFQGREVVTHKT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 68
6 -3.700sp|Q5T6F0|DCA12_HUMAN DDB1- and CUL4-associated factor 12 OS=Homo sapiens GN=DCAF12 PE=1 SV=1 (Range: 336-453)  ali follow..  17  14..............................................................................................................................................................................................................................................................................................................................................................YEHIITVGTGQGSLLFYDIRAQRFLEERLSACYGSKPRLAGENLKLTTGKETWRNYFSDIDFFPNAVYTHCYDSSGTKLFVAGGPLPSGLHG............................................................................................................................................................. 111
7 -3.680sp|A6NGR9|CH073_HUMAN Putative uncharacterized protein C8orf73 OS=Homo sapiens GN=C8orf73 PE=2 SV=2 (Range: 303-394)  ali follow..  15  2.................................................................AVEALKALLTGDGGRMVVTCMEQAGGWRLVGAHTHLEGVLLLASAMVAFADLLPRLRSADDPQRLTAMAFFTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................. 84
8 -3.640sp|Q13148|TADBP_HUMAN TAR DNA-binding protein 43 OS=Homo sapiens GN=TARDBP PE=1 SV=1 (Range: 1-68)  ali follow..  21  1..................................................................MSEYIRVTEDENDEPIEIPSEDDGTVLLSTVTAQFPGACGL............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 41
9 -3.640tr|A8MXB6|A8MXB6_HUMAN Uncharacterized protein OS=Homo sapiens GN=OPA1 PE=4 SV=1 (Range: 1-166)  ali follow..  14  89................................................................WPARLATRLLK---------------RYLI--LGSAVGGGYTAKKTFDQWKDMIPDLSEYKWI........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ 135
10 -3.600tr|E7ETR9|E7ETR9_HUMAN Uncharacterized protein OS=Homo sapiens GN=C20orf132 PE=4 SV=1 (Range: 657-709)  ali follow..  2..............................................................LCFAMQATKTLLLRTCCLQEFNIMEKNKGWLLGGKDGHLQGLFLLANALLE...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................... 53

FFAS is supported by the NIH grant R01-GM087218-01
1 2 6 4 9 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.