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Query: gi|60682315|ref|YP_212459.1| hypothetical protein (BF2845) [Bacteroides fragilis NCTC 9343] (Range: 1-207), from B.fragilis

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MLIILKQDDSCQVAQTTCTTNSLEIRYKDYSVLKKTLDLNTKSINSNSCIELIIYGTHGNEKEICKLTKPDIKDLSYFFKGKVCRLVLDACHSACHIPHFKEMLTDDGIILCHVGICQVNSIETKTGKDTYERWINGNKEGLKVWSDGIVPAIYTRKNNTLTYYECSKFEVDINHPFTGTEFKTYCLNLKSKGIKMVIKNHSDFDKILast
1 -6.750sp|O00469|PLOD2_HUMAN Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2 OS=Homo sapiens GN=PLOD2 PE=1 SV=2 (Range: 422-544)  ali follow..  20  6..................................................................................................NFWGALSPDGY---------------YARSEDYVDIVQGNRVGV-------VPYMANVYLIKGKTLRSEMNERNYFVRDKLDPDMALCRNAREMGVFMYISNRHEFGRL 94
2 -6.580sp|Q8IYK4|GT252_HUMAN Procollagen galactosyltransferase 2 OS=Homo sapiens GN=GLT25D2 PE=1 SV=1 (Range: 193-341)  ali follow..  11  9..................................................................................................NFWCGITPKGF---------------YKRTPDYVQIREWKRTG--CFPVPMVHSTFLIDLRKEASDKLTFYPPHQDYTWTFDDIIVFAFSSRQAGIQMYLCNREHYGYL 100
3 -6.380sp|Q7RTU9|STRC_HUMAN Stereocilin OS=Homo sapiens GN=STRC PE=2 SV=1 (Range: 350-571)  ali follow..  33.....QPHPSTTAICQTAVWYAVSWAPGAQGWLQACHDQFPDEFLDAICSNLSFSALSGSNRRCAGLLPPPTSCPEGLPPVPLTPDIFWGCERLCGEASLQAVPPSNQA-VCQ----GPTPDVTASPPCHIGPCGERCPD-----------------GGSFLVMVCANDTMYEVLVPFWPWLAGQCRISRGGNDTCFLE........ 222
4 -6.380sp|A6NGW2|STRCL_HUMAN Putative stereocilin-like protein OS=Homo sapiens GN=STRCP1 PE=5 SV=1 (Range: 350-571)  ali follow..  33.....QPHPSTTAICQTAVWYAVSWAPGAQGWLQACHDQFPDEFLDAICSNLSFSALSGSNRRCAGLLPPPTSCPEGLPPVPLTPDIFWGCERLCGEASLQAVPPSNQA-VCQ----GPTPDVTASPPCHIGPCGERCPD-----------------GGSFLVMVCANDTMYEVLVPFWPWLAGQCRISRGGNDTCFLE........ 222
5 -6.220sp|Q02809|PLOD1_HUMAN Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1 OS=Homo sapiens GN=PLOD1 PE=1 SV=2 (Range: 412-552)  ali follow..  17  6..................................................................................................NFWGALSADGY---------------YARSEDYVDIVQGRRVGV-------VPYISNIYLIKGSALRGELQSSDLFHHSKLDPDMAFCANIRQQDVFMFLTNRHTLGHL 94
6 -5.460sp|Q9NWS6|F118A_HUMAN Protein FAM118A OS=Homo sapiens GN=FAM118A PE=2 SV=2 (Range: 25-142)  ali follow..  15  8.....................................................................................LVIGTGVSAAVAPGIPALCSWRSCIEAVIEAAEQLEVLHPGDVAEFRRKVTKDRDLLVVAHDLIRKMSPRTGDAKPSFFQDCLMEVDLEQHIRSPVVLQSILSLMDRG.............. 117
7 -5.230sp|Q07617|SPAG1_HUMAN Sperm-associated antigen 1 OS=Homo sapiens GN=SPAG1 PE=1 SV=3 (Range: 1-76)  ali follow..  15  1...MTTKDYPSLWGFGTTKTFKIPIEHLDFKYIEKCSDVKH-----EKILCVLRSGEEGYYPELTEFCEKHLQALA................................................................................................................................... 69
8 -5.210sp|Q13884|SNTB1_HUMAN Beta-1-syntrophin OS=Homo sapiens GN=SNTB1 PE=1 SV=3 (Range: 437-538)  ali follow..  19  19LTIHYENGFSITTEPQEGAFPKTIIQSP-YEKLKMSSDDGIRML-------YLDFGGKDGEIQLDLHSCPKVFIIHSFLSAKITRLGLVA..................................................................................................................... 102
9 -5.180sp|Q13425|SNTB2_HUMAN Beta-2-syntrophin OS=Homo sapiens GN=SNTB2 PE=1 SV=1 (Range: 435-540)  ali follow..  17  25..LTIHYENGFTISRENGGSSSILYRYP-FERLKMSADDGIRNL-------YLDFGGPEGELTMDLHSCPKVFVLHTFLSAKVTRM......................................................................................................................... 102
10 -4.790sp|Q9Y462|ZN711_HUMAN Zinc finger protein 711 OS=Homo sapiens GN=ZNF711 PE=1 SV=2 (Range: 1-64)  ali follow..  22  4.......................................................GGGSLGLHTPDSRMAHTMIMQDFVAGMAGTAHIDGDHIVVSVPEVSDVVTDDGITLDH.............................................................................................. 64

FFAS is supported by the NIH grant R01-GM087218-01
1 2 6 4 6 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Rodrigues AP, Grant BJ, Godzik A, Friedberg I. The 2006 automated function prediction meeting. BMC Bioinformatics. 2007 May 22;8 Suppl 4:S1-4.