current user: public

Please be advised that we have recently moved our server to a new location. We tried our best to fully test all functions on the website, but if something does not work for you please let us know.

Query: gi|60682385|ref|YP_212529.1| putative CTP pyrophosphohydrolase (BF2916) [Bacteroides fragilis NCTC 9343] (Range: 1-130), from B.fragilis

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130
# Score Template Links and tools%idFirst MKSIEVVAAVIRLGEKYLCVQRGQTKFSYTSFRYEFPGGKVEEGESLQEALQREIMEEMDYVIEVGEKLLTVHHTYPDFEITMHAFLCHPVGQRYVLKEHIAAQWLSTREMAILDWAEADKPIVRKISEQLast
1 -7.830sp|Q7Z404|TMC4_HUMAN Transmembrane channel-like protein 4 OS=Homo sapiens GN=TMC4 PE=2 SV=3 (Range: 271-348)  ali follow..  15  29.................................WDFGLCGDVHVRLRQRIILYELKVEL....................................................................... 54
2 -7.470tr|F5GWT4|F5GWT4_HUMAN Uncharacterized protein OS=Homo sapiens GN=WNK1 PE=4 SV=1 (Range: 1517-1608)  ali follow..  17  18...................................FPGPSLTQSQQPLEDLDAQLRRTLSPEM................................................................... 45
3 -7.390sp|Q9H4A3|WNK1_HUMAN Serine/threonine-protein kinase WNK1 OS=Homo sapiens GN=WNK1 PE=1 SV=2 (Range: 1764-1855)  ali follow..  17  18...................................FPGPSLTQSQQPLEDLDAQLRRTLSPEM................................................................... 45
4 -7.390tr|F5H2M7|F5H2M7_HUMAN Uncharacterized protein OS=Homo sapiens GN=WNK1 PE=4 SV=1 (Range: 2262-2353)  ali follow..  17  18...................................FPGPSLTQSQQPLEDLDAQLRRTLSPEM................................................................... 45
5 -6.990sp|Q7L0X2|F194A_HUMAN Protein FAM194A OS=Homo sapiens GN=FAM194A PE=2 SV=1 (Range: 504-663)  ali follow..  9........................DQAGNRIRAWNWSNSITSSPFVSFKPVFLALNRYIGVRILEQDKI-SITFLAMGQQARISV............................................. 68
6 -6.710tr|Q5VUY5|Q5VUY5_HUMAN Chromosome 1 open reading frame 158 OS=Homo sapiens GN=C1orf158 PE=2 SV=1 (Range: 1-108)  ali follow..  13  10................................PLSTPSWQIETKYSTK-VLTGNWMEERRKGLPYKHLITHHQEPPHRYLISTYDDHYNRHGYNPGLPNGQKLLWLPEKSDFPLLAPPTNYGLYEQL... 108
7 -5.920sp|Q07507|DERM_HUMAN Dermatopontin OS=Homo sapiens GN=DPT PE=2 SV=2 (Range: 19-201)  ali follow..  10  1................................QYGDYGYPYQQHDYSDDGWVNLNRQGFSYQCPQGQVIVAVRSIFSKKE-RQWNYACMPTPQSLGEPTECWWEEINRAG-MEWYQTCSNNGLVAGFQSR 100
8 -5.750sp|Q5W0A0|F194B_HUMAN Protein FAM194B OS=Homo sapiens GN=FAM194B PE=2 SV=1 (Range: 457-696)  ali follow..  10  83.......ATFYDENSDIWLNLSSNLPKDKRQKAWNWWNLNIHVHAPPVQPISLKINEYIQVQIRSQDKI-IFCFTYEQKQICLNL------GTRYKFVIPEVLSEMKKKTILEAEPGPTAQKIRVLLGK. 201
9 -5.140sp|Q9ULT8|HECD1_HUMAN E3 ubiquitin-protein ligase HECTD1 OS=Homo sapiens GN=HECTD1 PE=1 SV=3 (Range: 1995-2058)  ali follow..  14  7LQLLRILYIVASDPYSRISQEDGDEQLQFTFPPDEFTSKKI------TTKILQQIEEPLAL..................................................................... 61
10 -5.070sp|Q5THJ4|VP13D_HUMAN Vacuolar protein sorting-associated protein 13D OS=Homo sapiens GN=VPS13D PE=1 SV=1 (Range: 3559-3648)  ali follow..  15  59ITCAELVLDVSPKTQRVILKKKEPGKRSQL---WR............................................................................................... 90

FFAS is supported by the NIH grant R01-GM087218-01
1 2 6 4 9 8   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.