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Query: gi|60681337|ref|YP_211481.1| hypothetical protein (BF1846) [Bacteroides fragilis NCTC 9343] (Range: 1-71), from B.fragilis

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70
# Score Template Links and tools%idFirst MFDNYAALSYNERENDFINIIIIYNTASYFISHLKMFLSFFIFRNKEKVYECNTLINNTLLNIDSETLSETLast
1 -7.2802w9p_A mol:protein length:87 MULTICYSTATIN  ali model follow..  13  18...RFAIQDYNKKQNAHLEFVENLNVKEQVVAGIMYYITLAATDDAGKKKIYKAKI............... 70
2 -6.9205kux_A mol:protein length:98 Designed influenza inhibitor protein HSB.2  ali model follow..  13  19...RTAVAIYNYHEQAHLTFVENLNCKEQLGEGDYYYITLAATDDAGKKAIYEAKI............... 71
3 -6.4203ul5_A mol:protein length:139 Canecystatin-1  ali model follow..  61...RFAVAEHNSKTNAMLEFERLVKVRHQVVAGTMHHFTVQVKEAGGGKKLYEAKV............... 113
4 -6.0803l0r_A mol:protein length:115 Cystatin-2  ali model follow..  14  22...HFATSSQTEGREFYDTVVTVKEVETQVVAGMNYKLTIEISPSVCKIGE.................... 69
5 -6.0405o46_B mol:protein length:120 Iristatin  ali model follow..  12  23...HFAISSQVENRTNFDTLMTLISVESQVIAGVDYKLKMKVAESTCVIGVDSYSKERCYLKVNVPY.... 86
6 -5.8402l4v_A mol:protein length:135 Cystatin  ali model follow..  19  64...RFAVREYNNKNNALLEFVRVVKAKEQVVSGMMHYLTVEV-AGKKKLYEAKVW................ 116
7 -5.6204n6t_A mol:protein length:79 Adhiron  ali model follow..  13  11...RFAVDEHNKKENALLEFVRVVKAKEQVVAGTMYYLTLEAKDGGKKK...................... 56
8 -5.4402wkc_A mol:protein length:119 ORF34P2  ali model follow..  27......IISVPLFEKEKGSNVKVAYGSAFLPDFIQLGDTVTV-RVQAKESGEYVNYNFVFPTVEKVFIT.. 90
9 -5.4104tx4_B mol:protein length:83 Cysteine proteinase inhibitor  ali model follow..  10  10...RFAVEEHNKKQNALLEFGRVVSAQQQVVSGTLYTITLEAKDGGQKK...................... 55
10 -5.3403fhd_A mol:protein length:508 ORF 37  ali model follow..  19  379.....ANLFVNVRHSYFYQVLL-SIVEEYIGLD-KYYIATGFFRKRGYQVEIPTLLIVTPVYFPRGAKHRL 468

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Rodrigues AP, Grant BJ, Godzik A, Friedberg I. The 2006 automated function prediction meeting. BMC Bioinformatics. 2007 May 22;8 Suppl 4:S1-4.