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Query: gi|60682315|ref|YP_212459.1| hypothetical protein (BF2845) [Bacteroides fragilis NCTC 9343] (Range: 1-207), from B.fragilis

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MLIILKQDDSCQVAQTTCTTNSLEIRYKDYSVLKKTLDLNTKSINSNSCIELIIYGTHGNEKEICKLTKPDIKDLSYFFKGKVCRLVLDACHSACHIPHFKEMLTDDGIILCHVGICQVNSIETKTGKDTYERWINGNKEGLKVWSDGIVPAIYTRKNNTLTYYECSKFEVDINHPFTGTEFKTYCLNLKSKGIKMVIKNHSDFDKILast
1 -6.400PF17039.5; B3MYJ1_DROAN/115-236; Fucosyltransferase, N-terminal  ali follow..  14  35........................................................................................QCPVYTCELSNKHDYLPSDAIVF-HAAEMYSIFEPVPSPRSPHQAYVFALMEP-PGETKHRLDDEIGFYNLTMTY----RLDSDIVWPY.............................. 121
2 -5.990PF08288.12; A0D6G2_PARTE/41-130; PIGA (GPI anchor biosynthesis)  ali follow..  21  9......................................................................................................................................VRYMTNGLKVYQTVVLFTYVGTLPIFRQILLREEIHIVHSHAATSYLGGELLLHAKSMGFKTVFTDHSLF... 86
3 -5.880PF12450.8; K9UXL0_9CYAN/75-168; von Willebrand factor  ali follow..  16  10....LPENEFQKVSSNPLSTFSIDVDTASYSNIRRFINDGQLPPPEAVRVEEMI......................................................................................................................................................... 59
4 -5.800PF02576.17; RIMP_NEIMB/12-79; RimP N-terminal domain  ali follow..  16  26........................................................................................................................................................VFIDKESGITVEDCATVSNHLSRVFMVEDIDYKNLEISSPGLD............ 68
5 -5.730PF01673.18; UL32_GAHVM/44-641; Herpesvirus putative major envelope glycoprotein  ali follow..  14  407MITQLKHAITKGGTSAECLLCNLLLIRTYWLAMRKIITYSANNIGLFHSIEPVLDAWRSQGHRTDLGDEGCFVTLMKSAGTEAIYKHL--CDPMCAA---RIAQTNPRSLFDHPDATNHDELALYKARLASQNHFEGR------VCAGLWALAYTFKT----------YQVFPPRPTALSAFKDAGALLQRHSISLISLEHT..... 593
6 -5.540PF03410.13; MP44_MYXVL/1-589; Metallopeptidase from vaccinia pox  ali follow..  15  386..MYIKYSDAGFIDYVQLALGLRRKIHKHVHGIHIRHQFSADDIKTILESDTFMKYSKSKPAAMYQY-------LSFFVSGNTIEDILQHRESVVLCRTYKNKIV-----------------QTRYDIQTLSSFVCGIFKGPSVTSEYLTDIMWKLKRKGLIYLEFVELQKNMFYLFMFTLFTSRCVVVSKKG------NTEDFSSM 581
7 -5.420PF11424.8; G4RLL7_THETK/2-86; Protein of unknown function (DUF3195 topsan)  ali follow..  10  3.....................................................................................................................................LLTTLGGKERSVAQDLCDCLYGNGDTQVRCEPIYPGVLFVE--FQRRETLELCLSMK---FRVLVRRIEIYEKV 72
8 -5.390PF00113.22; ENO1_MAIZE/148-443; Enolase, C-terminal TIM barrel domain  ali follow..  14  25......QEFMILPTGASSFKEAMKMGVEVYHNLKSIIKKKYGQDATNVGDEGGFAPNIQENKEGLELLKAAIEKAGYTGKVVI-GMDVAASEFFGEKDLYKSFVSEYPIESIEDPFDQ-------DDWSTYAKLTDEIGQKVQIVGDDLLVTNPTRVAKAINEKTCNALLLKVNQIGSVTESIEAVRMSKRAGWGVMASHRS..... 237
9 -5.320PF08126.11; CPG2_PORGI/25-222; Propeptide_C25  ali follow..  6.....GRNPQVRLLSAEQSMSKVQFRMDNLQFTGVQTSKGVQVPTFTEGVNISEKGTPILPILSRSLAVSETRAMK-----EVVSSKFIEKKDVLIAPSKGVISRAENPDQIPYVYGQSYNEDKFFPGEIATLSDPFILRDVRGQVVNFAPLQYNPVTKTLRIYTEIVVAVSETAE-AGQNTISLVKNSTFTGFEDIYKS....... 196
10 -5.310PF12943.7; A2GB63_TRIVA/4-245; Protein of unknown function (DUF3839 topsan)  ali follow..  15  7...LVMNPTSMLVEMKSFIPSSYTFETEIQKIKQELLQGDLDCTAKDETNEEYLYEMQDIIDHLPKLPEIQQQKLTIPEFDEIEVKATDSVEIKKFI-NHKVMDKDCDMLYKNISD-----IYKSEEFKTYDNFVSLVAK--KVWNEQIKPATFELKKTVVLAGQISMYNAKMNPQCSKCKAAMRKYNYSVKEIERMRNDYADLKK. 229

FFAS is supported by the NIH grant R01-GM087218-01
1 2 6 4 9 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.