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Query: gi|60680256|ref|YP_210400.1| hypothetical protein (BF0697) [Bacteroides fragilis NCTC 9343] (Range: 1-74), from B.fragilis

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70
# Score Template Links and tools%idFirst MKREVAKHPHVLDNNIPMFYLKTSGCCCVKHPDVFIPLFYSYHLWKMKRLSLSYLVLLSIQVLFVTFVHFENIKLast
1 -5.160[S] COG4331 Predicted membrane protein  ali follow..  21  122.................................AVFSLFIVYQLYRYFTHSLLLILITILDVFVIALTLLE... 160
2 -5.100[S] KOG4102 Uncharacterized conserved protein  ali follow..  36  70.ERHVHFHAGVID-NEHMNRRKSKCCCIYRKPHPF....................................... 102
3 -4.890[UR] KOG4677 Golgi integral membrane protein  ali follow..  10  492LSNINNPQTRNALHTVDSTAFKL-LSMLRGHP--------------ARLFFVLYFIIMHLWLFFIVLTYTPEI. 550
4 -4.870[S] COG4711 Predicted membrane protein  ali follow..  18  29...................................IPLIYTMEVWWIRLIVIAIALMFMVVFLLNYTEGFRK.. 71
5 -4.800[P] KOG1530 Rhodanese-related sulfurtransferase  ali follow..  20  234........................................NVFTSSPSCVTIEQLLLALLQTSLSPFGHSANIR 267
6 -4.760[U] KOG2887 Membrane protein involved in ER to Golgi transport  ali follow..  14  118........PVMVLMPQKFAICFTLGCGFIIGSFFALPQNQLAHMSSAERLPLTLGFIATMVGTIYVSMVLHS.. 183
7 -4.720[C] KOG3868 Vacuolar H+-ATPase V0 sector, accessory subunit S1 (Ac45)  ali follow..  23  387.............VESAHFTLQTEDCTGTFSSGSWMGIVSALVL--IAGLMFGYVMLQSVQ----TMDRFDDPK 441
8 -4.680[O] KOG3457 Sec61 protein translocation complex, beta subunit  ali follow..  21  58......................................FYTEDSPGLKVGPVPVLVMSLLFIASVFMLHI.... 89
9 -4.630[O] COG0785 Cytochrome c biogenesis protein  ali follow..  13  2..............DVGLVTAFLGGTLALLSPCAALPAFFAS---GPRMILHGVVFYAGLLVLLVPL....... 57
10 -4.580[V] COG1968 Uncharacterized bacitracin resistance protein  ali follow..  4.................QTIVEALLLGLLEGLTEFIPVSSTGHILLAGHFGKAFEILIQLGAILAILSVYFR.. 64

FFAS is supported by the NIH grant R01-GM087218-01
1 2 6 4 6 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Rodrigues AP, Grant BJ, Godzik A, Friedberg I. The 2006 automated function prediction meeting. BMC Bioinformatics. 2007 May 22;8 Suppl 4:S1-4.