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Query: gi|60681243|ref|YP_211387.1| hypothetical protein (BF1751) [Bacteroides fragilis NCTC 9343] (Range: 1-157), from B.fragilis

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MDKEQFKSIVHPVMKANSFRRKGNSWYKTTAECIVVFNLQHSLYGKMFYINLAALLRKGDDLLFPKEYQCDIRMRFPIMEIEGYSTQMILDLESTIDEQLRSRLIENIINISIPILQKLESIDGIIELYGEKPELNNIYPFSSILYRKEMNNKLKAILast
1 -8.590[M] COG3056 Uncharacterized lipoprotein  ali follow..  111..RFLLQEVLEKQMTARGYMVGP---------------------NGPVNLQIIVSQLYADVSQGNVRYNIATKADIAIIATAQNGNKMTKNYRASYNVEGAKNIADAVNSVLTDTIADMSQDTSIHEFIKQNA........................ 225
2 -5.940[Z] KOG2659 LisH motif-containing protein  ali follow..  10  5PTREELQQLVIDHFLHHGYSEVIETFSKEVN---------------------------------------------------------VVPKKDIDNMNARNEVRRLICVGEME--SAIEKMTTLCPTILEDDEINFIVRKQHLIEMVRQKLTKEPV 103
3 -5.760[S] COG2315 Uncharacterized protein conserved in bacteria  ali follow..  3LATDYFSRQ-VEKLMAYGFEKRDNGYFYNEGEFEAQLRIDEAG-----NIWDRVIDCDLEEDYLPLQQAAWQGTYTGQVRAAYLELLERLSVACFEATPFQSMQANRLAKHITKEWSDPMD.................................... 124
4 -5.720[G] COG4668 Mannitol/fructose-specific phosphotransferase system, IIA domain  ali follow..  17.NKDQAIEMVAQALIQSGY---------VEEGYLAGMLEREAQITTYLGNGIAIPHGSVTTRALVKKTGVKIFQFPQGVAWDKDNIAYLVAADSDGHLALLRQLARLLDKETVKHLITTQDVSEFYARLMGKS........................ 143
5 -5.630[M] COG2980 Rare lipoprotein B  ali follow..  43.PNGPLSRAVRNQLRLNGVELLDKETTRKDVPSLRLASVFRNGQTAEYQMIMTVNATVLIPGRDIYPISAKVFRSFFDNPQM-------ALAKDNEQDMIVKEMYDRAAEQLIRKLPSIRAAD.................................. 166
6 -5.390[V] COG1787 Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes  ali follow..  10  51MDGHEFEDYLFVLLAGLGYNETYQT--KSRDFGADLLFNDSS--GARTVVQAKCLSDALGVKA--------IQEVFTAKVYYQAEKAIVI----TSTETISDPCRRLASAAEVKLIER----EALQEIIAL.......................... 162
7 -4.840[S] KOG0293 WD40 repeat-containing protein  ali follow..  10  63IRKSEFVRIITRALYSLGYDKTGAMLEEESG----------------------------------------------------------ISLHNSTIKLFLQQVKDGKWDQSVKTLHRIGFPDE-----KAVKAASFLLLEQKFLEFLKVEKIADAL 156
8 -4.840[K] COG1475 Predicted transcriptional regulators  ali follow..  24RNKKIFNE-LVTSIAHLGLKR---------------ITVSVRDDNSEYDLVCG-------------------QGRLEAFVSLGQTHIPAILVHASVEDCFVMSLVENLARRQHSPLELVREIAVLRDR-----------GYSLTEISTKTDFSEEYV 135
9 -4.800[V] COG1715 Restriction endonuclease  ali follow..  11  166VSPARFEVIVLDVLHRLGYGGHRGD--GTGDGGIDGIISLDKLGLEKVYVQAKRWKGTVGSAE--------VRGFYGALPEQKVKRGVFITTSGFTAHARDDRLVHLMIDNDIGVSSRLLKLPKLDMDY............................ 302
10 -4.770[S] COG3512 Uncharacterized protein conserved in bacteria  ali follow..  10  21.AKRKAANQFRQFLLKDGYQMLQLSVYLPEEGSIRCLEVTEKQFAGMKIL........................................................................................................... 89

FFAS is supported by the NIH grant R01-GM087218-01
1 2 6 4 6 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Rodrigues AP, Grant BJ, Godzik A, Friedberg I. The 2006 automated function prediction meeting. BMC Bioinformatics. 2007 May 22;8 Suppl 4:S1-4.