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Query: gi|60681247|ref|YP_211391.1| hypothetical protein (BF1755) [Bacteroides fragilis NCTC 9343] (Range: 1-299), from B.fragilis

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKYFRFVCEIKAKSSEDVNKSRDCINEVGIYCAYLSRMYEYYFPATQTDNVVSITVCLIDNLQKTKYPTSCDMKVVSNVVNIDKFNQLTPKDKSFYIIDLCQQAIMSLVYEMQWNTEVFEHTYDKIISMGGLFREYWRKAKSSPNKQLKAQIYFEDDYEKDGIYIDFTDKRGKLIKRVQFAPKGYQIYCKGISELQWQDNSHVIIKRAFGHGFTKTSDYWMIGVDGSIEYHSPRVENTEINTHGLFDLGILYWEGKTIMQNPNKGLELIKKAADLNNKHAQKWLERNMKQRTDSEQKNDLast
1 -28.900[R] COG0790 FOG: TPR repeat, SEL1 subfamily  ali follow..  119........................................................................................DNLLIEQEYIDKFSQEIYMAKALADTDKSQRAAFISILIHAESDALFFSRIGFNQEKTFRLATLWSQDGDPQMDYQMGRLTLNDDEPYQARPASLKWFRAAAEKGVV----EAQSLLGGIYSGGEGDEWG-IKPDIQEAQKWYGQAAKQG--DSDAQIALGKIYYSGATGRTDYAKALALFTQVENDGNSRSTMPLSWMYYNGLGTAPDCD 334
2 -26.300[MOT] KOG1550 Extracellular protein SEL-1 and related proteins  ali follow..  10  530........................................................................................................................QAQKGNANAMYKIGLFYYFGLRGLRRDHTKALAVDKGEPRSMELLGEIYARGAGVERNYTKALEWLTLAAKEGL----YSAFNGIGYLYVKGYGVD----KKNYTKAREYFEKAVDNE--DPSGHYNLGVLYLKGIGVNRDVRQATKYFFVAANAGQPKAFYQLAKMFHTGVGLKKNLE 703
3 -9.430[D] KOG1126 DNA-binding cell division cycle control protein  ali follow..  337.....................................................................................VYLLAQYKLREALNCFQSLPI-EQQNTPFVLAKLGITYFELVDYEKSEEVFQKLRDLSPSR-----VKDMEVFSTALWHLQKSVPLSYLAHETLETNPYSPESWCILANCFSLQREHSQALKCINRAIQLDPTFEYAEYEKSKTSFRKAIRVNVRHYNAWYGLGMVYLK----TGRNDQADFHFQRAAEINNSVLITCIGMIYER......... 545
4 -8.850[U] COG5010 Flp pilus assembly protein TadD, contains TPR repeats  ali follow..  10  93.......................................................................................................................................................................NEQALAVMQQVAIYHPADREVLGAYGKAQAAAGQLEQALATISRAQTPDRPDWKLRSAEARLRYREALDLKPNEPSVLSNLGMSYL----LTKDLRTAETYLKSAASQAGSSVRQNLALAVLQGR....... 228
5 -8.580[DO] KOG1155 Anaphase-promoting complex (APC), Cdc23 subunit  ali follow..  10  315.......................................................................................LYAKEACAALSYLAHKVFL-TDKYRPESCCIIGNYYSLKGQHEKAVMYFRRALKLNKKYLSAWTLMGHEYVEMKNTPAAI-----DAYRRAVDINPTDYRAWYGLGQAYEMMGMPFYALHYFRKSIFFLPNDSRLMLEEAIKCYKRAVNCTDTEGIALNQLAKLHQK----LGRNEEAAYYFEKDLERNMFEALVFLATHFKNHKKFEE... 536
6 -8.520[NU] COG3063 Tfp pilus assembly protein PilF  ali follow..  51..............................................................................................................................................................................................................................DYRQATASIEDALKSDPKNELAWLVRAEIYQY----LKVNDKAQESFRQALSIDSAEINNNYGWFLCGRLNRPAE.. 123
7 -8.230[U] KOG3081 Vesicle coat complex COPI, epsilon subunit  ali follow..  10  186............................................................................................................................................................................................................................GSKIQEAYLIFEDFSEKYPMTCLILNGKAVCCMQ----MGNFDEAETLLLEALNKKDPETLANLVVCSHVGKSSSRHLS 263
8 -8.180[S] KOG2796 Uncharacterized conserved protein  ali follow..  279..............................................................................................................................................................................................................................NFAEAHRFFTEILRMDPRNAVANNNAAVCLLY----LGKLKDSLRQLEAMVQQDPRHYLFNLTTMYELESSRSMQKK 356
9 -8.090[R] COG4785 Lipoprotein NlpI, contains TPR repeats  ali follow..  13  77..............................................................................................................................................................................................................................LRALARNDFSQALAIRPDMPEVFNYLGIYLTQ----AGNFDAAYEAFDSVLELTYNYAHLNRGILYYGGRDKLAQDD 152
10 -7.970[R] KOG1129 TPR repeat-containing protein  ali follow..  10  196...........................................................................LEQKKLIETFALLSRVDQPMAALKTYSAGLE-VFPENVTMLTGMARVQEALGEYDESVKLYKRVLDAESN-----NIEAIACVATTYYYGGKPELAMRYYRRILQMGVSSPELFLNIGLCCMAAQQFDFALSSILRAQSTMTDDVAADVVSAARSFRIALSHDPDHSESLVNLGILKHR----EGKIDEARSLYSSATSKNMFEGNYNLGLVSFTQGKYHECRE 429

FFAS is supported by the NIH grant R01-GM087218-01
1 2 6 4 9 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.