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Query: gi|60682315|ref|YP_212459.1| hypothetical protein (BF2845) [Bacteroides fragilis NCTC 9343] (Range: 1-207), from B.fragilis

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MLIILKQDDSCQVAQTTCTTNSLEIRYKDYSVLKKTLDLNTKSINSNSCIELIIYGTHGNEKEICKLTKPDIKDLSYFFKGKVCRLVLDACHSACHIPHFKEMLTDDGIILCHVGICQVNSIETKTGKDTYERWINGNKEGLKVWSDGIVPAIYTRKNNTLTYYECSKFEVDINHPFTGTEFKTYCLNLKSKGIKMVIKNHSDFDKILast
1 -6.380[S] COG0779 Uncharacterized protein conserved in bacteria  ali follow..  18  40........................................................................................................................................................IYIDSEDGINVDDCADVSLDVEDPITV----AYNLEVSSPGLDRPLFTAEHYAR. 95
2 -5.630[S] KOG4137 Uncharacterized conserved protein  ali follow..  23  121.....................................................................................................................................................LKGFYKSPTNNIRYHNAEIYQL-IVKPMAPGVDQEY---LKLRGANFVLK........ 166
3 -5.320[C] COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes  ali follow..  15  292VVPILRDTDNMSLADIEKQIAEFATRARAGKLTMEDMSGGTFSITNGGTFGSMMSTPIINAPQSAILGMHNIIERPIAQNGQVVHRLIDGKEAVQFLVMIKNLLEDPARMLLDL............................................................................................. 417
4 -5.130[S] COG5458 Uncharacterized conserved protein  ali follow..  10  7.....................KLCVGCDSVEDLEEWIEFRLDERRRAGEPAEHWHTTRMVPTRGAEI----------TDGGSLYWVIKGNVQCRQLITEIRPFTDDEGIGRCHLMLDPHVVRTDWQPRRAFQGW......................................................................... 109
5 -4.980[J] KOG3191 Predicted N6-DNA-methyltransferase  ali follow..  13  90......NPHALDVTLETAKLNDIKIDVVRTDLFAGLENLLGK-------VDVLLF----NPPYVPTDEEPKSNIELTYAGGRTGRSTLDR-----LLPRVPELLSPRGVFYLVALHSNDIPALLKEHSEQMT---VSVSMERRCGIEHLYILKFVMKENNVKAAPLAEIE..................................... 234
6 -4.860[D] KOG1036 Mitotic spindle checkpoint protein BUB3, WD repeat superfamily  ali follow..  31HLLVSSWDKRVRLYDVSTNSLKGEFLHGG-AVLDCCFHDDFSGFSVGADYKVRRIVFNVGKEDILGTHDKAVRCVEYFDFSILFFYT-----LCLFCDVTGQVITDKTVKCWDPRGASGPERTQVGTYLQPERVYSMSLVGHRL--------VVATAGRHVNIYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVE..... 221
7 -4.760[R] COG4221 Short-chain alcohol dehydrogenase of unknown specificity  ali follow..  14  27......................................................LLEQGATVVMVDWNEKALNDLAAKLGERAIPQVTNLLDADSCNAMIPEILGKVDILYCNAGTYIGGDLT-ETTPEAIDKMLNLNVNAVMKNVQAVVPHMSERKTGDIIVYSGSKWAI-----------QGMRRQMIPHGVRV........... 178
8 -4.730[C] KOG0559 Dihydrolipoamide succinyltransferase (2-oxoglutarate dehydrogenase, E2 subunit)  ali follow..  14  338VVPVLRNVESMNYAQIELELANLGVKARDGKLAVEDMEGGTFTISN--------GGVFGSMFGTPIINPPQILGMHGPEIRPIMQILIDGREAVTFLKKIKTAVEDPRIMFMNL............................................................................................. 452
9 -4.690[S] COG4938 Uncharacterized conserved protein  ali follow..  24  253....................................................................................................................................................IVLALLVTKPGGLVIIENPEAHL---HPRGQSYLGRLIALAAEAGVQVVVETHSDH... 305
10 -4.690[G] COG4284 UDP-glucose pyrophosphorylase  ali follow..  16  86..............................KKENEYWRLGLEAIGKGEVAVILMAGGQGTPKGCYDIGLPSKKSLFQIQAEKLIRLQDMVKDKKVEIP----------WYIMTSGPTRAATEAYFQEHNYF----GLNKEQITFFNQGTLPAFDLTGKHFLM----DPVNLSQSPDGNGGLYRAI--DFDRRGIKHVYMYCVD.... 252

FFAS is supported by the NIH grant R01-GM087218-01
1 2 6 4 9 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I, Godzik A. Fragnostic: walking through protein structure space. Nucleic Acids Res. 2005 Jul 1;33(Web Server issue):W249-51.