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Query: gi|29345424|ref|NP_808927.1| two-component system histidine kinase with response regulator receiver domain BT_0014 [Bacteroides thetaiotaomicron VPI-5482], from B.thetaiotaomicron

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MLILLLGFIIYLFRGERMKRDELKWEMKELGIIRDLTRKTYGHLLELASQGEVVSTWSESDLRLYRERREKTCGVLKELQQFVHTPEQQERIDSLCLLLEQKEMLLSAAMSTFDELENIGETVGEKVPAIVRQVRRQPTRNILAPAVKEAYAGTATTGEEQPEKKKSFLKKVFGGKEKKSAYRQQREQQRAASEKVPSSTTRNSGNNAAVHLLHALSREVTEKQKEQREKLSAQMDSLHLSSRALNKRLNGLVGDFDKVAGERLETRYNAIAADREKSYNTAATLALFVFLLAIVLYTLLHRDVNRCLRYRRELESSDLKNKELLQSRKNMMLTIAHDLRAPLTAIKGYAELLPGEVDEKRKDEYAVHIVRSSDYMIGLVNSLIEFYLLDAGKGKMNVTVFRPLSLFDEIVKLHTPSVRKEGLTLCTDFEGLDTVVEGDRPRIMQIANNLLSNAIKFTRKGKISLQAAYGQGELRFSVQDTGPGMTEDEQKRIFRAFERLDNARYLPGFGLGLAIVSRLTELLGGRITVESPYGTGSLFRVALPLSEVAKHGEDGENGYAEDYGLEGTYVLVIDDDRIQLDITRRMLVRNKVRCECCRTVRELMAALRERTYDLLLSDIQMPDMDGYRILDLLRSSNMENARTIPVLAVTACADDEEHYISFGFAGCLRKPFSMDELISTVSRMVVKTGKKEPDFSFILSGEKDKGRMLDIFIRETEESIHTLENALCGHDRDTIHKVLHKNLPLWETVRMNFPMARLRGLVTHTAAVWEERQYMEVGEIIHAAEKLAESARKIRESIDEEHTDYRGLast
1 -116.000IDP04166 sensory box sensor histidine kinase/response regulator VieS [Vibrio cholerae O1 biovar eltor str. N16961] VC1653 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  18  478.........................................................................................................................................................................GKLRSSEQVAKLSTEQLRWLTELLDAIPSMIFISDAKGEVV----LTNAAYRKIYHTCCEKGCVQPQPECSFLALPDQHEAEFSIII----------QAPKSNCSIGEHYFHVTRRAISHPINQRKYYLTLFNDITELKETEQALRQSNEQALQAVEARNHFLAVVSHELRTPIAAMLGLMEILASRLKSSESQLLLTNAISSAERLKLHVNDILDFSKIEAQQLQLDIGLYNLADELGPLLRGFEASAQLKEIEFDVIWSNSLLLANFDALRFNQIVTNLLSNAIKFTDQGRVVFKIDVAPEMLTIVVEDTGCGMTQTQIESLFVPFAQADSTRRFGGTGLGMSIVANLIELMNGKIEVKSEFEQGTQIQVNLPLVTQTCDNLTQAQTEPAHSRLLQGHVLVADDDAINRLLIKKQLSELGLSATLVSDGLQAFEKLSQEQYDLLITDCHMPHLDGFALTRKVKQEI--SLFKGAVVGCTAEDLAAEQALQAGMDKVIYKPYTLANLRKVLSRYLTTQWVALPEQSWLDAQEEEREEMAMVVAESLAQDIALLN-----QPDCDVKALAHRIKGAAGSLQLQRLADLAKTVEKQNDP---QQLVADKQQLINAMHEVVEQAQQWLHQYQSE...... 1146
2 -114.000IDP01908 gene: ssrA; sensor kinase [Salmonella typhimurium LT2] STM1392 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  20  373................................................................................................................................................................................................................................................................................................................NKVAERTQALNEAKKRAERANKRKSIHLTVISHELRTPMNGVLGAIELLQTTPLNIEQQGLADTARNCTLSLLAIINNLLDFSRIESGHFTLHMEETALLPLLDQAMQTIQGPAQSKKLSLRTFVGHVPLYFHTDSIRLRQILVNLLGNAVKFTETGGIRLTVKRHEEQLIFLVSDSGKGIEIQQQSQIFTAFYQADTN--SQGTGIGLTIASSLAKMMGGNLTLKSVPGVGTCVSLVLPLQEYQPPQTPNMPVINNLLPPWQLQILLVDDADINRDIIGKMLVSLGQHVTIAASSNEALTLSQQQRFDLVLIDIRMPEIDGIECVRLWHDEPNNLDPDCMFVALSASVEDIHRCKKNGIHHYITKPVTLATLARYISIAAEYQLLRNIELQEQDPSRCSAMVINSKIFQSLDLLLADIENAVSAGE--KIDQLIHTLKGCLGQIGQTELVCYVIDIENRVKMGKIIA----LEELTDLRQKIRMIFKNYTIT.......... 920
3 -114.000IDP04186 sensor protein TorS [Vibrio cholerae O1 biovar eltor str. N16961] VCA0709 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  18  320..........................................................................................................................................................................QRYSNEQAAQQLLHDTLTQFAKLNNTVNQLVDASNQVTTAAVSKLSNTLYDAQLILTVLGLLGLVIVVWIVWKVVYRSVIQRLDQHTAALLSVAKGQLDVDVESEVLAKRELQQHKEHLEELVEQRTCQLSEMNHKLNQEVLNHAKARQQAEQASRAKSAFLATMSHEIRTPMNGVLGTARLLQDTTLTSTQQHYVQVINRSGRSLLAILNDVLDYSKIEAGHLEIHHTHFDLYRLVSETHELMQSRAREKGITLTYHIDDVTQYWQGDEIRIGQVLNNLVGNGIKFTDQGEVRIRIRLDGQGIRFAVEDSGIGIAEEEQATLFDAFTQADGRRKLGGTGLGLAISRKLVQAMGGELQLASQLGQGSCFWFTLPLPVGEPVETPALAVD----DVPVANVLLVEDNEVNCLVAQGFLTSLGHQVTLAKSVQEAKLCFQQQRFDIALLDIHLPDGNGVDLLRDLRQMEDSIHAVIPFIAVSAHVEEVAGYLAAGFDGYLPKPLVKEQLAAMLRQQLTAKSGDDADMRDKAEGVEKMREIVGYFEQGCAEFFALCEAE--RDNDAQIKSQAHKLKGSAGALWLTQLYQLCQQIEKADSPAAAYQQTPLVDAVENAKQALRNALDLLSKE.......... 1020
4 -113.000IDP91425 aerobic respiration control sensor protein ArcB [Vibrio vulnificus CMCP6] VV1_0550 [Vibrio vulnificus CMCP6]  ali follow..  16  1...................MKPMKNLAQYYVDLLVKLGIVRFSMLLALALVALAVVVQVGITLVLKGNVDDIDIVRSVFFGLLITPWAVYFLSVVVDQLEESRQRLSKLVSKLKDMRS-------------RDQELNVQLQQNIEQLNQEIEERIRAEEAREEAMKDLENEVFQRERTQVELAERTALLRSFIDASPDLIYYRNAEGVFS----GCNRAMEELTGKKEHQLVGLSPWDVYSKEVAQQIVDTDQQVF--ANNRALTYEQWLEYPDGRKHYFELRKVPFYSKDGRHLGLVGFGRDITERKRHEESLEKAS-------RDKTTFISTISHELRTPLNGIVGLSRMLLDTRLTDEQRKYMQTINVSAITLGNIFNDIIDMDKFDRRKLELLPAPLNFEDFVAEIESISALMAEQKGLRFDLERLELPKAIEVDATRLRQVIWNLISNAMKFTKEGGVVMTVSSDFATIIIEVEDTGIGIPEAELDKIFAMYYQVKSGNLHAGTGIGLAVSRQLINMMDGDITVSSEEGFGSTFTISIHVPVIESAPSTVDKPKTQ----LHLSIFMVEDIALNVTVARSLLESLGHKVTVAMTGDEAIRSFDPSRYDLVLLDIQLPDMTGFDVAAYYRKHY---SQLPPLVALTANVKDKREYLDNGMDEAISKPLAVQAIQDVIEKLIIKQESTTIEMEEAEVGPQPVLDSIRMFEEMMPEYLEILDSNMIAKDQPGIVSEAHKIKGAAGSIGLKRIQSVAQKAQSPDMPAWWENIADWVEEIKNEYQNDIQILKSWLEQ.......... 779
5 -112.000IDP04733 two component system histidine kinase [Coxiella burnetii RSA 493] CBU_0789 [Coxiella burnetii RSA 493]  ali follow..  17  122........................................................................................................................................................IRFSQFDDMLKGSLLVGHDRTQLQLVSGELKSKIFFYENILSKLPTNVYWKDKNSVYL----GCNERLARVMGLPSRKIEGMTDFDFVWGKEAAKSFIEFDQKVMR-SGIPLMTEDVFKEASGNIVTVLTNKTPLKNEHGETIGVLAISVDITELKKTQAQLEIQRQKAEAANKAKSEFIANMSHDIRTPIAGMLGMLQDLLNVAEETKTQRDSELLMGATDELLQLCNEILEVIRLESGKESEQSEAFDLRELIKRTIELLQPVAHQKKLTLACEVDGIPQYLDGIRMYLSRTLLNLISNALKFTENGFVKVKVRLDKATIQIAVEDTGMGIPRDKFDTIFEHFSRLTPSGLYKGAGLGLYTVKRYVDAMGGEITVDSEVGKGTCFTVIIPFTVADHAERTNEPAEGAKPSETALSVLVVEDNALAATAVAVVLKPFNCAVDFAESGAQAIEKARKGIYDLILMDVGLPDISGIEATQRIRAMEDKAKAQVPIIALTGHAEKRQECLEAGMQEVLSKPLQRLAIESTLEQFIFRAKAEKEAVRMCNGSPEFTRQLLTILDEDLKSTRAKLEKAYQERNNEILRAELHRLRGGVSYLKLPQLDNALKMFHEVVKIENPALLEESYSKAKKAIEAFLKMWEKQ............. 829
6 -111.000IDP02181 two-component sensor/regulator [Yersinia pestis CO92] YPO0256 [Yersinia pestis CO92]  ali follow..  21  375................................................................................................................................................................................................................................................................................................................MKVKERTLALAEAKRAAEQANRRKSDHLTTISHEIRTPLNGALGAVELLQNTPLDAGQMRLAETAHQCSLSLLAIINNLLDFSRIESGQMTLSLEKTALLPLLDQAMLTIHSQALSKSLALSTFISNIPLELELDTLRLRQILVNLLGNAVKFTPQGRIQLRVRRQNQTLCFTVEDTGCGIDVQHQQTIFQPFMQ--TSDHEQGTGLGLAIADNLAKMMGGHLTVFSEPGQGSCFSLCLPFNAITPPMPETEALKSLPLQPWQMHILLVDDSETNRDITGMMLQQLGHQVTRADSGTTALAIGRQHRFDLVLMDIRMPVLDGLATTARWRHDPANIDSHCMITALSANADEQIKTSQAGMNHYLSKPVTLGQLAEMLDLTAQFQLERGVDLSPQLSEPQPLSALSLKLYQSLQVLIQQAKDAI--ENLPVLSHTLHTIKGCAGQAGLIELQDAVIQLEHALDTHETLTQQE-IIQLDEIIHVLLQPPTTCESTFIISQGQS.. 935
7 -107.000IDP02415 sensory box sensor histidine kinase/response regulator, putative [Coxiella burnetii RSA 493] CBU_1761 [Coxiella burnetii RSA 493]  ali follow..  19  2..................................................................................................................................................................................QGGKNNNEEALLEIINNVPHYIFWKDKNLIFRGCNKMFAEQFG----KDQSGIIGKTDEDFPWSKELRKKYRQDDLSVIETGKPKLDYEESQVQADGSIKTVLVSKVPYRNKEGNIVGILGIYTDITKRKRMEESL-------RKANKVKSEFLANMGHDLRTPLTGIILIAEYLWKKQTEEKDKQLSKDLILAGKQLLHFINEVLEITNVEAGNIDYEKKSFSLKKLIDQVFAMLRPSFQQKQLAFYNDYDHIPEVLIGSEIMIFRILMNLLGNSLKFTEEGQVTIQTKLNQVLIELIVSDTGIGIPKEEHKNIFAQFKRLTPSSKYRGSGLGLFLVKTYAEALQGQVTLESEPGRGSRFICTIPLTVGKRKDLRSQKEKSKKSDLKKVPVLLVEDTPLAQKAIGIKLEELGCAVDLADNGEAAIKKASQNRYSLIFMDIGLPGIDGYEAAARIRAWEKEHHSPTPIVALTAHVEGEQQCYKVGMNLVLHKPMLGQYGQRILNRFVNNERREIGSATRIFGNKAAAEKMFKLFLEELPRFHEDIKKAFEANDRKALAFHVHKLNGAACYAPTPRLQKILVDFESKLRSRSPIDLKPYYDKLEKELQAVLATANS.............. 657
8 -106.000IDP04484 gene: barA; two-component regulatory protein [Yersinia pestis CO92] YPO3381 [Yersinia pestis CO92]  ali follow..  22  219..............................................................................................................................................................................................................................................................QLDSRVEGHMLGELDILKNGINSMAMSLAAYHEEMQQNIDQATSDLRETLEQMEIQNVELGLAKKRAQEASRIKSEFLANMSHELRTPLNGVIGFTRQTLKTSLTPTQTDYLQTIQRSANNLLCIINDVLDFSKLEADKLILEHIPFSLRETLDEVIILLAHTAHEKGLELTLHINDVPDQVLGDAMRLQQIVTNLLGNAIKFTEEGNIDILVVVQQVTLMVEIHDTGIGISESQQAQLFQAFRQADASRRHGGTGLGLVITERLVKEMGGNISFQSQMSCGSIFRFHLTLELNESIPYRPSEEQPRKQPKLPFRVMAVDDNPANLKLIGTLLEEQIEETVLCDSGAMAITYAREHTLDIILMDIQMPEIDGIRASEIIHQI--PHHQETPIIAVTAHAGQQEQLLRLGMADYLAKPIDEARLLQVLSRYQSDNPPLSTAVRQAANKEDLARDLLTMLLEFMPQITARVQAILAGADDGDILNLVHKFHGSCACSGVPRLRQLCMTIELQLRQQNLQDLEPEWLELLDEIENVSEAAKTYLRT.......... 929
9 -106.000IDP04543 sensor histidine kinase/response regulator [Vibrio cholerae O1 biovar El Tor str. N16961] VC2453 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  22  218..............................................................................................................................................................................................................................................................HLDVRIEGKMHGELDTLKKGINAMAVSLSEYHVEMQHSIDQATSDLRETLEQLEIQNVELDIAKKRAQEAARVKSEFLANMSHELRTPLNGVIGFTRQMLKTQLTNSQADYLQTIEKSANNLLTIINDILDFSKLEAGKLALENIPFEFQEVLEEVVNLQATSAHEKGLEITLKIDKIPRGVVGDPLRIQQVLTNLVGNSIKFTERGNIDVSVEMDVIDLQFMVRDTGIGISERQQAQLFQAFSQADASRRYGGTGLGLVITQKLVSHMGGEISLTSRLHQGSTFWFTLRLHTTELPLNDNTSLPKPQADKLPLCVMAVDDNPANLKLITALLQERVEYVVSCTSGQEAIEQAQSRQFDIILMDIQMPHMDGVTACKAIKQLK--GYRDTPVIAVTAHAGERDRLLKAGMDDYLTKPIEEHILQQVLVHWSPHTRSKQVALRQSANKEDLAKEMLGMLVDYLREVETVVNTALEDEEYPDLLHHIHKLHGSCSYSGVPRLRKICASLEQALRNGASDELEPELFELQDEMAKVLEASRDYLN........... 927
10 -104.000IDP04401 sensor histidine kinase [Vibrio cholerae O1 biovar eltor str. N16961] VC1831 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  21  190..............................................................................................................................................................NGQFAGVATVDLSLESLIQFVAATAEQYNLGVNLKDAFGVEVVSHNFRTYDNALV---SYYSFGEFNWQIEVVNANQHVDEIIFDLIINIEKGLMPILLCVMVGYFLISHYWIRPIVLIAKKVSESREGEIIDIRYKSQDEIRHLIDTFNQKTIYLEAEKVKAQASTKAKSAFLATLSHEIRTPMNGVLGTAQILLKDELTSKQRQHLTSLYESGEHMMSLLNEILDYSKIEQGKFELDHSAFPLKSIIGSIKSIYSSLCVEKGLKFQLNSETDGRWYYGDKARLRQIIFNLLSNAVKFTEAGFVAIGLSEEENYLIIKVQDTGIGIAQESLGRIFRPFEQAESHRRFGGTGLGLAIVKQIAELMNGTVLVQSEVGQGSCFKVRVKLAITEPVTEDVKPTKAKT--YPGLRVLIVEDNRTNIMILEAFMRNKGFECHSVMDGVQAITALQESSFDLVLMDNHMPLKDGIQATREIRQLPLPQ-AKILLFGCTADVDTRDKMLSAGADDIIAKPIAEHELDMALEQHSERLYQFHRE................................................................................................................. 729
11 -102.000IDP90302 sensory transduction histidine kinase, putative [Borrelia burgdorferi B31] BB_0420 [Borrelia burgdorferi B31]  ali follow..  17  609...............................................................................................................................................................................KSKLILVSSFNEALLLLYKGKVDGIISDEYTAAAVFEELNIDDKIPTFRDLAFDLSLAIYNQDYILKEIIQKVVMRS-DSQMYLNDWKFDIYYKSRSIRFKNFKFLVITFIIFYFTFLGFVIIFMFRLSFEQKRRYSFVMNEKKIAEAANAAKTIFIANVSHDIRTPINGIMAATELLDTTILTDVQKDYVRMINYSSDSLLSLIDDILYLSKIDVNELYVESQEIDLESEMEMVLKAFQSQCAKKNIDLFSYSKIFNNYIKGDIVKIKQVLINLIGNAFKFTDDGVIVLNYEEVCRTVEFKVIDTGKGIEKENFSKIFEIFKQEDSSRVHEGAGLGLSISRELIRLMGGGIAVDSKVGEGTTFSFMLPFLLGSEDFEDLVPIDSALRIKEPINVLIAEDNQVNQKVLKDILVVIGINIDVVDDGVKALKSLKDKKYTISFIDIRMPRYDGFSVAKEIRKFEKKNLKPCVLVAVTAHAEYKDKCLASGMNDYISKPIHISSIKTILKKYLQFEVDDIGELKELNLSYVSYSELCRGLVDFISINIIDLEKAFDEEDLSLIKDISHSISGALSNMRS-ELYKDFQKIETSKDSI--SELKKMYSFVKDDLFQLISDIKENILFESEIVSENK. 1415
12 -102.000IDP04163 sensory box sensor histidine kinase/response regulator [Vibrio cholerae O1 biovar eltor str. N16961] VC1349 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  18  437.......................................................................................................................................................YHWLSQMLDDLSVAIQLSQNAEQQRLAERKVLEQSQLNQEILDATPNPMYCLSADGKFL----TVNAKFLDLMGLYNNEVIDKEPQEIFPAEVAERFAAAHQVLT--QQQSSQNYEVSLVDYTGVQREMLVYEASFSDRADKVNGIVGILLDMTERKEMEDELRKAKEAADAMSQAKGDFLANMSHEIRTPMNAILGMAHLALNTPLDTTQRKYVTRINESAKNLLGIINDILDFSKMEAGKLNVERIDFNLDDVLDNVTAVVSLKAQEKGIEFLMDIDHIPLGLIGDPLRLGQVMVNLCGNAVKFTSQGEIVLSARVQQVTLRFAVKDTGIGIAQDKLDDLFDAFSQADNSRQYGGTGLGLSISKQLVELMGGQITVHSEEGKGSTFEFSVVCGLQDAKMRDNEAHHNSRPNFAGQSLLLVEDNEVNQEVALGLLQDTGLNVVVANHGQEALERLEHADFDLVLMDMQMPVMDGITATEHIRAN--PRWHSLPIVAMTANAIDIERCLQAGMNDHLSKPIEVDKFYQVLRHFLQVSDEQEQAIFRIGGNQQRYFEILRHFIDSQVDELNSVTGLIEAQDWSSATRVAHTLKGSAANLGLEALAQLAAEMEQSLEQQVLP-SFELLQQAQSLLTQVDDELSAWEHQHKEPLL.... 1257
13 -100.000IDP01805 sensory box sensor histidine kinase/response regulator [Coxiella burnetii RSA 493] CBU_1084 [Coxiella burnetii RSA 493]  ali follow..  19  15.................MEVSTTRIHKPILKKLGSLFLNL------AETSQDIFWIRSVDF-----YTHVYVSPAFENIFGISRQTLYANPNKWMNAVIIEDRDRLRHLIMEWQVKNKKGAAYTVDYRIIDAYGEMH-----------INETSYPVYEDDQCLGYAGVVKDVSSEKLRVKEFDNAVHYFRHFVERVSGVFWVKGSRGD---KQIYISPTYEKIWGVSCESLYQNPKSVLPEDISNGKVNVNFYETAADTPDSKYEFHFRIRRPDGEIRWIKDTYFPIME-NGKLVGFAGIAEDVTNDALREKELWEAKEFAEQANRTKSDFLAMMSHELRTPLNAILGMSQILKTHNLSDEQQGQIDVISQAGQNLLALLNDLLDFAKLEAGKLSFTEETMDLHELVMKIKGDMLLLAHKKGIQLKFDYPNIPSKVMGDAKRIRQVLVNLLSNALKFTEKGYVQLTANCKKMTLCFTVKDTGIGMEKTKLSSIFNRFQQINSQRKYDGVGLGLSIVKELLEKMGGTISVTSEPGVGSEFTCIIPFRLQADEKQAVNNSTYDRESRFNMNVLVVEDNLINQRISKIMLEQVGCQVDIAGCGKDAIEKMKKH-YDMVFMDIGLPDMDGFETTQCIRHNETPG-QRVPIVAMTAHVQDRKRCFDVGMDEVMAKPIMQDDLIKVLKRWAA......................................................................................................................... 683
14 -96.600IDP04341 putative aerobic respiration control sensor protein arcB [Coxiella burnetii RSA 493] CBU_0634 [Coxiella burnetii RSA 493]  ali follow..  20  106..........................................................................................................................................................................YMLTGQVISKSVNASQIFLENILYNIPQYILWKDRNFVYLGCNHNFAKLVG----ETPESIIGKTDFDLWRSQGANSIRPTDVEVL--EGKQLVDVEQSLSLPNGKEGVFLISKVPLRDERNEIIGILVVGTDITERKQNEQKLIEAKLQAELSDRAKSEFIANISHDLRTPINGILGIAQIFNMHEHTKKQEPLINDLSASANLLLGLVEDILDFARLEVGKLELKYSTFNLRQLVTFLVKTFSFQTQQKQIKINVYYDSLPDSIVSEPNYIRRIFLNLIGNAVKFTEKGQIDVTVNLEGNKLKILVKDTGIGIPKDKLNTIFDRFSRATPVSRYEGLGLGLSIIKRLLDNLGGEVHVSSIENEGSTFTLTIPCEIASLQSPREKEETQKILKERKVRVLLIEDDKLSQNIEKIFLEEFGCKVDTASNAEEALVKFNES-YELICTDIGLPDKDGYALVREIRQMA-NSHKPVPILAMTAHVREKNKCLEAGMNGFINKPVTVEEIRRALLDYL.......................................................................................................................... 629
15 -95.200IDP04164 sensor histidine kinase/response regulator [Vibrio cholerae O1 biovar eltor str. N16961] VC1445 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  20  30...............................................................................................................................................................EENRVILAAISAFSVATNKNHIFEELKTLLNRYIQFDDFIVISKDKNGHQFRTAIASNASFVWPNGVKFQRVLNGECILLFEPCKLDEFACLMGSIDKPQAQISDSVLILLGQNKGQFSLEAKETLSRFRP------LERAISDIEHKEELQKELRLAQKLAEQANQSKSNFLAMMSHELRTPLNAVLGLIDIL-RGESTSYQVELLEQMENSAELLLIIINDILDLSRIESGHFSLHCHWLDLEKKLDQSLVYHRQIAQDKGVHFYVQSNNPTLEYYTDSARLTQILFNIVGNAIKFTKQGQVDVVLDYTKDGVVFRVKDTGIGIEKNRVEQLFTPFIQADNSRNYGGTGLGLAITKHLVELMGGTIQVESEFGIGTTFTLYIPLQSRLKNIKPSTSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLEKNHFDLVLMDISMPIMDGIAATKILRDKH----IEIPIIALTAHTSDKQNCIDAGMNDIVLKPIRSKDIMEVVKRFLNP........................................................................................................................ 572
16 -94.400IDP04664 sensor histidine kinase/response regulator [Bacillus anthracis str. `Ames Ancestor`] GBAA0996 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  27  468...........................................................................................................................................................................................................................................................................................................AEQKTADLQITKLELEEKASELLRSSKYKSEFLANMSHELRTPLNSILLLSEMLKENHLSDDEIELATVIHSSGKDLLTLINDILDLSKVEAGKLDVIFEATNISDMAASMHQNFLHIAAQKNVEFTVEDSTIPDLFYTDAKRIEQIIKNLLSNAFKFTEKGSVSLHFDSSKDWITISVKDTGIGIAKEQHQLIFEAFQQADTIRKYGGTGLGLSICKEFARLLGGWITLESHVGEGSTFTVYIPNLPNGLHDVQLSNLEVAANVFQEKTIMIVDDDHRNIFALQNALKKQHANIITAQNGLECLEILKNNNIDLILMDIMMPNMDGYETMEHIRMN--LGLHEIPIIALTAKANDKEKCLSAGASDYISKPLNLHQLYSVMSVWLIK........................................................................................................................ 896
17 -94.300IDP93815 sensor kinase protein [Yersinia enterocolitica subsp. enterocolitica 8081] YP_001007719 [Yersinia enterocolitica subsp. enterocolitica 8081]  ali follow..  19  281...........................................................................................................................................................................................................................................................................................................ATTLLCLLLFVFYRYRRLKMELVRLGSKNNLELSVIAHELRTPLIGILTACEGLVDKIVSASQRERLANVIHVTRELLDNLDLSLDNAKINAGSVTQNPQPQLLAELCDTTVKLFISFAETHGTTLQVRYQSFFLPHLFDGTLVSQALNNIVSNAIKHTHDGMVLIECSLGKNMFSIEVIDTGTGIPSKVLARLSEPFYQGKDTPHPKGTGLGLFVAKKNMHLTGGHLAIVSQPGVGSRVTIALPAIAAHSSSDSPELHLPTTIITESRRLLVVEDEPLLLEVQYELFSSMGFQVDAVANTQQAYQSWLQHHHTIIVTDCRLDESDGFELVRHLRKLMQDSPEPVLIIGQSASLEDAQRAREVGMDYLLQKPVAREQWQQLIRDYFASKEKEH................................................................................................................... 788
18 -87.500IDP04495 sensory box sensor histidine kinase/response regulator [Vibrio cholerae O1 biovar eltor str. N16961] VC0622 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  23  485................................................................................................................................................................................................................................................................................................................KELESNLLIIRKQNDELQLANKLKDEFLATTSHELRTPLHGMIGIAEALISGPISAAHKYQLDIIISSGQRLATLVDDLLDYHKMRYGALDIQRCAVDLSSATRLVLELSHHLLGKKTLRIINQVSEQPVWVSADPQRLEQVLYNLIGNAIKYTSEGKIVISATYIDDKVRVQVVDTGQGIPAEQLEHIFEPLIQAGHDRYRQGAGLGLSISRQLIELMHGTLYVSSQPMVGTTFSFTLPLASEEEIAQARPEQSNLPENEHGPLLLVADDEPVNLRVLDSFLRLEGYRVHTAQDGHQVLEAIKREKPELVLLDIMMPGMSGYQVCEKLRQTY--DHAELPIIMLTALNDDRVRGFEAGANDYLSKPFNKQELAARIVAHLTASKAELRENAQLQKELKHRAMVEASLLETQGRLLEQLESA................................................................................. 930
19 -76.100IDP04184 sensor histidine kinase/response regulator LuxN [Vibrio cholerae O1 biovar eltor str. N16961] VCA0522 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  19  161...............................................................................................................................................................................................................................................................................................................LFTYVFGNLCFFRNQISHETKVSIAKTFGAGIAHEMRNPLSALKTSIDVVRDYSLDAQELDLLHQILNEADDVIYSGNNAIDLLLTSIDENRVSPASFKKHSVVDVIEKAVKTFPKNAADQHSVELEHQPFDFFGSDTLLTYALFNLLKNAFYYQEHFSVCISIEQTSEHNLIRVRDNGVGIAPEMLEDIFRDFY---TFGKNGSYGLGLPFCRKVMSAFGGTIRCASQQGQWTEFVLSFPRYDSDTVNEMNRNVIPLQKSRHERRILVVDDNQSIRTFTAILLEQQGYEVVQANDGSEVLKHMESQNIDLVLMDIEMPNVGGLEATRLIRNSE-HEYKNIPIIGYTGDNKTLALVQTSGMNDFIVKPADRDVLLNKVAAWV.......................................................................................................................... 686
20 -70.000IDP04365 sensory box histidine kinase [Clostridium perfringens ATCC 13124] CPF_1523 [Clostridium perfringens ATCC 13124]  ali follow..  18  371..............................................................................................................................................................KEKNLYYVLRINDITEEYKMEKNLKLEEQRLRGVTENIKDLIFTIDVEGKIS----YVNKAVIDVLGYSEEELIGKNYYDLLLVESNLNIIDSKYFNEDK------ILTIDKVRSKKGLVQLESISSRIKDNKNNTLGWVRVARNIEDVREIEILK-NKFEEIKQYDKVRSEFFANLSHELRTPINIIYSCIQLLNKANFANLYDKYEKTLKQNCFRMLRLVNNLIDITKIDSGFIKMDFINYDIIKLTEDITMSVIPYVESKNIDIIFDTNCEELEIRCDPDKIERIILNLLSNAIKFTEPGKIEVSIFADETWVDIRVKDTGIGIPSHMKEFIFERFIQNDKSRNKEGSGIGLSLVKSLVELHEGKVFLRESNESGSEFSILLPNVKLENDVCE-NGSLDYKTEVEKISIEFAD......................................................................................................................................................................................................................................... 782
21 -67.900IDP04227 sensory box histidine kinase [Clostridium perfringens ATCC 13124] CPF_0198 [Clostridium perfringens ATCC 13124]  ali follow..  20  385.......................................................................................................................................................................NLKDITEEYTLTKNIKRNEQLLSCINNNVQDLIISVDNNGLIT----YVNDSVLKTLNYTYEEIIGMPIINLLGKNDEILN--------QLKLEDEEDSIKCKLVGKHSFVYVESIIRTLNDNNEIPYGKVIVAKNLTSKKRLENLAIKFKE-AKAYEQIRNEFFANISHELRTPLNIIYSTIQLLNPMDFNNFYDKYKQGLKINCYRMLRLINNLIDVSKIEVGFLKADFTNRDIVFLVENIVSLVIPHSENKDINIIFDTNVEENIIKCDPVKIERLILNLLSNAIKFTQNGEIFVDLNISKDWVKISIKDNGIGIPKEMQASIFDRFVQADKKRRNEGSGIGLSIVKSIAELHDGKIELISDGIKGSEFIVWLPNVKLNYT-EESNNLVDYITDDKNIELELSDIYEVH.................................................................................................................................................................................................................................... 791
22 -67.800IDP04569 sensor histidine kinase [Clostridium perfringens ATCC 13124] CPF_2242 [Clostridium perfringens ATCC 13124]  ali follow..  19  252.....................................................................................................................................................................KKMEESNNEFKEFKKKLRDNEIYFRNFLNNAPMSIAILNNDN---HRIFAVNKRFSHELNLSNREVINKNLFKIINIENKEEFLRTK------------KGEASFVTSGIEVFWELDILL------QSKGYLIISMKNITELKFSEKIK-DNLRKRTLSEQIKNDFLSSISHDLKTPINVIYSSVQVQEKNENIKKVDYYNQVNKENCMTLLRLANNLIDSSKIDYDYLKPNFKIYNIVTLIEDSIGNLAEYIKEKNLTYVFDTNEEEVYVNCDQEFIQRIILNLISNSIKHTREGGIGVEIKAKKSKVIISFTDTGEGMDKEFIEKAFLRYSKGNKKVKNKSTGIGLYIVKNLVELQNGTININSIKDTGTNIRLEFSREKSCG................................................................................................................................................................................................................................................................. 619
23 -67.100IDP04271 sensor histidine kinase [Clostridium perfringens ATCC 13124] CPF_2241 [Clostridium perfringens ATCC 13124]  ali follow..  17  275.....................................................................................................................................................................RYLRKKIEELKELENLLDREELLFNNITSAIGDYIFISKDEK-----LFYLNDEALEFLEVENKESILFESMEVLYEKILEKQVYLK-----EKGSMDSYKEIIFKNIKGGYSNGEFYTIPFGDN-----YKIIIINDITKKNNALRLNKYLKDKLE-EENIKGEFFTNICHELRTPINVISSALQLNNENKNLNSIERNNLVIKQNCLRLIRTINNFIDANKISEGQIEENVMVLNVVEVVENILDASSEYISKKKINFVFDPDFEEIFIAIDSEFLERIILNLLSNSVKYGSEGNIYVKIYFEGKDLVIMIENDGIAISYDEQKYIFDKFTKSNKARTQEGSGLGLYISKSLMKMQGGDLKVDIYEGHGNRFKLYFYDVDLFKETDRTEHIFNNNYYNLKERAEIFSD........................................................................................................................................................................................................................................ 675
24 -62.300IDP04327 sensory box histidine kinase [Clostridium perfringens ATCC 13124] CPF_1243 [Clostridium perfringens ATCC 13124]  ali follow..  15  94.................YLLEKYNKLEINLKKEKDMLDLF------LDSLTDYVFFKDIDG------RYINCNKAFENKVGIEKKYIIGKTDKDIFFDDPSKVETFIKTDREVINSRE------------KKVYGEEWGFECEDGYLEETVKSPYFDENNEVKGIIGLTRDISYKKAIEYRLKKNDKMFFEVFNYLDDVVIIKEGEK-----TIYVNHAFEKLYGLNCKELYKEKSMIVKLDRIHPEDRYKFSNID---FGNFFMEKARIVRADNEVRNVLFRANSIKNENGESIRRIIVINDITDTIEKSNEME----------KLRVEFFANISHEFKTPVNLIYSALQLLELDRNEESYINYIKMAKQNVFRLLKLINNLIDSTKLEAGFFNVNIKNHDIVSCVEDITMSICGFAEKNKISITFDTEEEEKIIAFDLNHLERILLNILSNAIKFNREGNIDVYMSFDERYANISIKDTGIGIQKDKIDLLFHRFKKINNRKVNEGSGIGLFIAKELVKINGGEMRVNSELGEGTEFIIKLPIKKIESEVLDEIALTSCERENREELYKVLSD........................................................................................................................................................................................................................................ 619
25 -56.200IDP04182 sensor histidine kinase [Vibrio cholerae O1 biovar eltor str. N16961] VCA0238 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  18  290................................................................................................................................................................................................................................................................................................................REVADRTQELAQALQTLEKAKHQQKEFFANVSHELRSPATAILGEAQITLRSNSDDEYRQTLLRISESAEQLAFRIEDLLMLIRHDERLFHPALTELLLGEIWQAVVRQASLLTHAQQVELTVNTPAQTQLCYTDCDKLLMVIRILVDNALRYDTQQPIGLNLELDEEAWRVQLVDQGIGIAEADLSVIFERYFRAENGYRPDGLGIGLTLAQSIVKQLDGEIRIESVLEQGTTVTLTFPRGEEQDANLID............................................................................................................................................................................................................................................................ 549
26 -48.000IDP04694 gene: yycG; sensory box histidine kinase YycG [Bacillus anthracis str. `Ames Ancestor`] GBAA5714 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  19  258...............................................................................................................................................................................QQARSSTESERRKLSSVLSHMTDGVIATDRKGDIIL----LNDPAEKMLNVSRETALDQSVLEVLGIQEEFTLDHLYEEP---------DSVLLDFSTRNEPYILRASFSVIQKETGKANGLIAVLYDVTEQERIE--------------RERREFVANVSHELRTPLTTMRSYLEALTDGAWQDPNPQFLTVIQEETERMIRLVNALLQLSKLDSTEHRLMKEWVDFTDFFNNIIDRFE-MSKEQNVSFKRSFSKKSRFIDMDTDKITQVLYNIISNALKYSPEGTVTYRLRDRGELLEISVSDQGMGIPKENVDKIFERFYRVDKSRQMGGTGLGLAIAKEMIEAHGGSIWAKSEEGKGTTIYFTLPMAADEEDEWE............................................................................................................................................................................................................................................................. 613
27 -47.700IDP04428 gene: phoR; sensory box histidine kinase PhoR [Bacillus anthracis str. `Ames Ancestor`] GBAA4832 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  24  233...............................................................................................................................................................................QEMTLEQEMQQDRLHTLIENMGSGMILIDSRGYINL----VNRSYKETFHVTDEEYLDRLYYESFHHTEIIELVEEIFMTEVKVRKQM------LLPLGIERKHFEVYGAPIIGTNHEWKGIVLVFHDITELKKLE--------------QMRKDFLANVSHELKTPITSIKGFSETLLDGAMDNKKEHFLHIILKESERMQGLIEDLLDLSKIEQQGFKLSMGTVDMKGLLEDIHMVLDNKAGEKEISLQVNTLK-RVSVIGDPSRLQQIFINLMNNAIVYTPAGVVSVELAEDKYNAYIKVSDTGIGISKDEIPRIFERFYRVDKSRNTGGTGLGLSIVKHLVEAHHGTITVDSEVGEGTTFTVVLPKSATEK................................................................................................................................................................................................................................................................. 587
28 -47.400IDP04409 putative hybrid two-component system regulatory protein [Yersinia pestis CO92] YPO3965 [Yersinia pestis CO92]  ali follow..  17  359.......................................................................................................................................................................FARNTASLEQTSRLLKEKSTLLETTFHAMRDGFALFDNEGFLV----VWNPQYPLLLGLAPEQLQHGQHYLQLLKQM-----TPLQEHILENLALPLPKTQELRLEDHRTIELRFSPVPG-------RGMVNVVLDRSERKALEEALVHSQK-----MKAVGQLTGGLAHDFNNLLAVIIGSLELTAT---DSSDATRIHRALKAAERGAQLTQRLLAFSR----KQSLHPRAVAMKELLDNLDPLIR-HSLPAHLTLTIEAQQPAWHAWIDVNQLENAIINLVMNA---GRSGEIKIRTWRKQDMVVLEVADSGHGMTTAVKEQVFEPF----TTKQTGGSGLGLSMVYGFVRQSGGRVQIESEPGKGTRVCLQLP-RALTQSLIEVLPALGAVANMADQLVLVLEDEPDVRQTLCEQLHQLGYLTLETGDSRQALALMADVDISIVISDLMLPDMTGAEVLQQARSVY----PHLKLLLISGQDLRRSKNFMPEVE-LLRKPFNQQQLVQALQRV........................................................................................................................... 851
29 -47.200IDP04556 putative two-component sensor histidine kinase [Yersinia pestis CO92] YPO3008 [Yersinia pestis CO92]  ali follow..  23  162................................................................................................................................................................................QARDNQLIGFKVPYVKLLSDVINTMTFDSAPNTLQVLDDGRLLYQ------------------SGSEELLTQQVPLNSQRLPYPLGAWQIDYYAKAVNGAPLYLWGGLLLLLLMVTVGLVMLYLYREYNRQLRLA--------------QQQVSFVGQVSHELKTPLTNITLYAEMLQELQPEQSEQRYLEVILNESQRLSRLIQNILSFTKAPKLHLQ----TVALRPLLNKIYHTFIPAFSAKNMELVLIINT-DIHLTTDVDRLTQIISNFLSNAEKYASQGKVELIGEQADDRVLIHVRDYGNGIAAKELKAIFQPFYRVKSTEGVSGTGIGLTIASQLAASLQGEISVTSNPA-GSCFTLKLPMTIKQDAATDKEQ.......................................................................................................................................................................................................................................................... 512
30 -47.200IDP04371 sensor histidine kinase [Bacillus anthracis str. `Ames Ancestor`] GBAA4776 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  23  66...................................................................................................................................................................................................................................................................................................................NQLLDAKQKTNADHAKVEISMRKMLSNISHDLKTPLTVILGYTEMLNKDKTKEEQQILLEKVHVKTLEVMELIHKFFDLAKLESGDKAIEMTKVNMNEVCREKILSFYDLVTSKGFHVHIDIPERNIYALGNVEVLGRVLNNFISNAITYGDDGKLGMTLRDDETNVYIDVWDTGKGIDESHIDKVFERMYTLEDSRLYQGSGLGLTITKRLVEAMDGKIHLSSKPYEKTIFTVALKKMQ.................................................................................................................................................................................................................................................................... 310
31 -46.900IDP04673 gene: resE; sensor histidine kinase ResE [Bacillus anthracis str. `Ames Ancestor`] GBAA1498 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  23  244...............................................................................................................................................................................KFNMNALQQEKEQLASILSSMADGVITLNQEGEVVVINPPAEHFLQVWQEEKEIEL----------SKKLPSELVELFHLVVESE------QQQVVGINLQKGNYVVLMTPLYN-QTKIRGAVAVLRDMTEERRLE--------------KMRQDFIANVSHELRTPMVMLQGYSEAILDDIVQTKENEFVQIIYDESVRLGKLVNELLDLARMESGNVELHIGEVDIHPFVEKIGRKFQGIAKDKEVALTVDFKDSIEQYPFDADRMEQVLTNLIDNAIRHTNAGHVTLVIDTKNNGLIFEVQDSGAGIPEEDIPFLFDRFYKADKARKKGGTGLGLAIAKNIVQGHGGKISVSSVVGEGTTFSVYLPNRII................................................................................................................................................................................................................................................................... 591
32 -46.900IDP01779 gene: phoR; sensor histidine kinase PhoR protein, putative [Coxiella burnetii RSA 493] CBU_0366 [Coxiella burnetii RSA 493]  ali follow..  23  4..................................................................................................................................................................................................................................................................................................RTHKLNLKKLPKAVRE-------------HINQLERIRSDFVANVSHELRTPLTVIRGYLETLLKKEVRDSKQKIFQQMYQHSARMETIIDDLLLLSRLESDDHPTEKMNVAVPEILKTLCADAERISGEKQHFIQLKAEP-NLYISGSEEELKSLFSNIIINSVKYTPSGRINVKWYRDDDHAVFSVVDTGIGIAKVHIPRITERFYRVDKSRESGGTGLGLAIVKHVLMRHDGELHIESEPGKGSIFTCRFPLV..................................................................................................................................................................................................................................................................... 251
33 -46.200IDP04550 sensor histidine kinase [Clostridium perfringens ATCC 13124] CPF_0460 [Clostridium perfringens ATCC 13124]  ali follow..  22  502................................................................................................................................................................................................................................................................................................................DELNNIQKGFKAAVDEEVKSQRMKTELISNVSHDLKTPLTSIIAYVDLLKGEEDEEKRKAYLETLERKSQRLKHLIEDLFEVSKATTGNINLNIMDVDISYLMKQVVLELDDKINEAGLDMRLSLPEEKVILPLDGQRTYRVFENLIINVVKYALPNSVYIDIKEGRENVDVIIKNISADEITFNINEISDRFVRGDKSRNTEGSGLGLAIVKSFVELQGGKFHIEVD---GDLFKAIISFKK.................................................................................................................................................................................................................................................................... 742
34 -45.600IDP95472 sensor histidine kinase [Listeria monocytogenes 10403S] YP_005962624 [Listeria monocytogenes 10403S]  ali follow..  26  230...................................................................................................................................................................................................................................................................................................................NKMTQTLETSQEEIERQEKRRRQFIADVSHEMRTPLTTISGLTEGLVNDIIPKSEDRCIALIDTEARRLTKLVNENLDYEKIRSNKIKLQKTRFNGKEFLELIKEQLDYVASEKGNTITVAIDK-DMAIYADYDRLTQVFINIVKNSVQFTENGQITLTGTQDYKESVLTITDTGIGMNTEELEQIWERFYKADMSRAFGESGIGLSIVKQLIEYHDGSITVTSEPNKGTSFTIRLPFFQDNEQ................................................................................................................................................................................................................................................................ 476
35 -45.600IDP04691 sensory box histidine kinase [Bacillus anthracis str. `Ames Ancestor`] GBAA5067 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  26  375................................................................................................................................................................................................................................................................................................................NKLNSHIGQLEQDIEKERKLEKTRKEFISGVSHELKTPLSIMKSCISILKDGVAEHKKEYYFQAMEREVDKMDTLILDMLELAKFESGTYKMKKDPFYIDTVMEAICEHLSVEIEKKELRVHKHIGPF--EVVANQGRIEQVIVNFITNAIRYTNKEDIIISTIDEKDHIKVCIENKGTHIEEEQLDKIWDRFYRVDAARSQGGTGLGLAISKNILELHDAEYGAENT-EDGVLFYFYLPKK..................................................................................................................................................................................................................................................................... 616
36 -45.500IDP01736 sensor histidine kinase [Bacillus anthracis str. `Ames Ancestor`] GBAA5503 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  22  228...................................................................................................................................................................................................................................................................................................................NAMADGIELHIKQLKEEKEKQKDFLDRITHELKTPLTAIIGYVDLIPKLKAKEDVKESLRYVAVESERLLSLVEELLKSSKYGTSTFEISPTVVNIKELAEEAVSIVKPRLQKFEIEVINELTDV--HVVADFDKTKQIFLNVLDNAIKYSDATQIRMNVIVNEREAKVFVHDDGIGIDEGVLAEWNESPEGK-ILPSSYGHGYGLYICQEIMDKQGGSMRIESSEEIGTTIFITFLLPRRMEDIKNLKAVK........................................................................................................................................................................................................................................................ 476
37 -45.500IDP04660 sensor histidine kinase, putative [Bacillus anthracis str. `Ames Ancestor`] GBAA0286 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  28  66...................................................................................................................................................................................................................................................................................................................NELITELEKVRIKAKRSEESRKQLLSSISHDIRTPLTSIIGYIDALKDGVAEIEKQEYLKILYMKSNNLKHLVDEIFNMAKLDANEFPLKEEKLDFSEVTREVLIDFLPEISKHNIKLQVLMPESTCPIIADHLSLMRIIGNLMKNAIYYGKDGKIGVELLETDAAYELLIWDKGPGIPKHDLQNVFERMYRSEQSRSFGGSGLGLSISKALVEKNGGHIWVESIPWERTTFGFSIPKHNTFKK................................................................................................................................................................................................................................................................ 314
38 -45.500IDP04665 sensor histidine kinase [Bacillus anthracis str. `Ames Ancestor`] GBAA1118 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  20  280.................................................................................................................................................................................................................................................GNKFGKPLLHAMRWLKNIAGGKYEEPVSKKGKP------------RFRKSGKEKWSFRLFSDVTNSEHLSITLKKNDAMRQVLQQTREEWITGLTHDLKTPLSSIYGYALLLESKQYNRDIQQFGSVMKEKSQYMTTLIDDLSLTYQLKNNSLPAQHVNIEMNQFVQKVLLQFINNPTLQNQNIEFVPSSNKIQYFIEEKWFQRIIENLLVNAVKHNNETNVIVKLSQNATSFTLSISDNGKGMDDKTKELLFERYYRGTNTESNIGTGLGLAITKQLVHAHNGAISIDSELGKGTTIILVFPFCS.................................................................................................................................................................................................................................................................... 580
39 -45.400IDP04180 C4-dicarboxylate transport sensor protein, putative [Vibrio cholerae O1 biovar eltor str. N16961] VCA0141 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  15  293.........................................................................................................................................................................QKRLSEAKIQHVLFEAEERQRNMINKTHVGLLLIDGQGRIE----EINPMAKRYFSLSDSMVRQLQAWSLFDTGNPNATVPLLLKNLTEELADITNVETVARRSDGSLFPVLFSLIAVSWKDRR--HYLVTLIDISKRKKAEIALQNANRDLQQRVEERTRMSSAITHELNQPLTGLRTLLSSNEERGETQLLKANTKLVHSLIDRMAAMTSQLKSFAF----NRPDALQAISLPDALQEILRIHQARL--TPVDVRVRLSSDLPLVMGEEQRLRQVLGNLVSNALDAMSQTLLSISAVSEEDQVIVRVSDNGCGIAPELLTTMFEPF----TSKKMGGLGLGLAIVANSLRDMQGSIVATNNPDAGMSFEIRLRAAQ.................................................................................................................................................................................................................................................................... 684
40 -45.200IDP04674 sensor histidine kinase [Bacillus anthracis str. `Ames Ancestor`] GBAA1956 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  26  106.................................................................................................................................................................................................................................................................................................................EIGVLVKSINDMTDELNAMEKMRQEFVSNVSHEIQSPLTSIKGFARALQDTNLPEEKRHYLTIIETETTRLSKLSQNLLKLTLLESEEYTPERVTYRLDQQLKQIVLNSEPLWAEKEIELDLDLEKV--HITADQESMSQVWINLIHNSIKFTPSGTISIKLKEYETLVEVRIRDTGSGISEEQKQHIFERFYKADSSRAYGGSGLGLAIVKKVLDLHQGEIKVESEEGNGTECIVCIPNYEEK.................................................................................................................................................................................................................................................................. 351
41 -45.100IDP04672 sensor histidine kinase [Bacillus anthracis str. `Ames Ancestor`] GBAA1482 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  25  353...........................................................................................................................................................................................................................................................................................................LKDRIDRLNVANTKLQQDIERERQLEKTRKEFISGVSHELKTPLSVIRSFAEGIKDGVSKDTT-YYTDVILEETENMNRLIVEMLELAKLESGTYKLDMTTFSIGELIQQVYTKLLFSMEEKHLQVNIDVNS-SIFVKANRSRIEQVVVNLLSNAIRYTEGEKIQVSVITMEDTVKIEIENTGNPIPEESLEKIWDRFYRLDASRHTGGTGLGLSIVKNILDLHHAEYGVYNTTN-SVVFYFNLQKVKEVK................................................................................................................................................................................................................................................................. 603
42 -45.000IDP04304 sensor histidine kinase [Clostridium perfringens ATCC 13124] CPF_2640 [Clostridium perfringens ATCC 13124]  ali follow..  21  52.................................................................................................................................................................................................................................................................................................SKGEYDKKIEINTDILEINDLINSINNLSQSIKEQENIRKRLTGDISHELKTPLTNIQSHLEAMIDGIWEPTE-ERLLSVKEEAERLSSLVSDMQKLNKYDESSIKLKKDNVNISDIICFVIFQFSNLAKSKNIKIEYEKKNI--NLYCDKDKITQALVNILSNAIRYSNESTIFIEEKLKDNKVIISIEDQGIGISEEDLKYVFERFYRADKSRATGGTGIGLTIVKSIVSSHGGEVKLESKLGEGSKFTIILPKEDI................................................................................................................................................................................................................................................................... 310
43 -44.900IDP04247 sensor histidine kinase [Clostridium perfringens ATCC 13124] CPF_1402 [Clostridium perfringens ATCC 13124]  ali follow..  23  235...................................................................................................................................................................................................................................................................................................................NNMASKIEEEKKLKEKSEKLRKEFVRNIAHDLKTPLSSIIGYSNIIKNNPDKESLHKYISVIENNGERANEMIMELFEFYTLQSSEFILHKKYQDLSEFLRNLIADYIYLLEEKDFDFDFEISEDDLYLEFDNKRLERAIGNLIINSVKYNKKGTFLISLKKEGDKVKIIVSDDGIGLSEEIKKHIFNPFVREEKSRKKGGSGLGLTISKEIVEKHGGTIYLSDGPLKGCNFVIELPIK..................................................................................................................................................................................................................................................................... 478
44 -44.600IDP04343 two-component system sensor kinase [Yersinia pestis CO92] YPO2916 [Yersinia pestis CO92]  ali follow..  19  235................................................................................................................................................................................................................................................................................................................RELRSLAQRIIWLSERLAWLESQRHEFLRHISHELKTPLASMREGTELLADEPLTQDQQEVVAILDHSSRHLQQLIEQLLDYNRKLADG-PGEPEHVDLAEMVGNVISAHSLPARAKMIRTETELDAR--ICWAEPTLLMRVLDNLYSNAVHYGEEGTIWICSRQVNDRVQIDVANTGAPIPTSEEIMIFEPFFQGSHQRKVKGSGLGLSIAQDCIRRMQGDLQLVTVDYAAVCFRIELPLTAENE................................................................................................................................................................................................................................................................. 483
45 -44.500IDP04258 sensory box histidine kinase [Clostridium perfringens ATCC 13124] CPF_2010 [Clostridium perfringens ATCC 13124]  ali follow..  20  230...............................................................................................................................................................................EITMERFKDKQNGLEAILKSMGSGVIAFDRDMNVLMINPYAKKIFG-----ISGEIIGNKLLDYITDKEVLKAFFDEKDRVEIE-----------VNYNDDPKILKIRKASIIN-EPEIIGTVVVIQDITDIKKLE--------------NMRSQFVANISHELKTPLTSIKGFAETLRYVDDDETRNKFLSIIDEESDRLARLLEDILCLYEIEQKR-STVLEEFNVDEEIEKVYMLLNDQAKKKGVEIFLDTNS-NCVLMGDKDKFKQMLLNLVSNSVKYTEKGKVRVESYNRDMNLVLVIEDNGIGISAEDLPRIFERFYRVDKSRESGGTGLGLAIVKHIVRLFDGEINVTSELGVGTKIVITIPIN..................................................................................................................................................................................................................................................................... 570
46 -44.300IDP04133 gene: hpkA; sensor histidine kinase [Clostridium perfringens ATCC 13124] CPF_1195 [Clostridium perfringens ATCC 13124]  ali follow..  21  45...............................................................................................................................................................................................................................................................................................................IVEINTLIDDKRKMENIYKEKDMELREAIANMSHDLRTPLTSIMGYVYLLNDDKLDKEEKEYLKIIEKRSLVLNDLITNFYGLSRIQADQYEIKLEPVNLELVLGEIIAAFYETLDYKFGEPEINIEEGLGPVLGDKQALNRIFTNLIENIIKHGE-GEVKISLKKKNKYIVMEFSNKAEELEPKDVNRIFEKFFTKDRMRTGQNTGLGLAIVKLLVEKQGQKIEAKKV-GNRLVINIIWSLES.................................................................................................................................................................................................................................................................... 287
47 -44.300IDP92003 sensor histidine kinase [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100002775 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  25  100...................................................................................................................................................................................................................................................................................................................NEMSHDLQVSFDSLEESEREKGLMIAQLSHDIKTPITSIQATVEGILDGIIKSEQAHYLATIGRQTERLNKLVEELLTLNTARNQVETTSKDSIFLDKLLIECMSEFQFLIEQERRDVHLQVIPESARIEGDYAKLSRILVNLVDNAFKYSAPTKLEVVAKLEKDQLSISVTDEGQGIAPEDLENIFKRLYRVETSRKTGGHGLGLAIARELAHQLGGEITVSSQYGLGSTFTLVLNLSGSENKA............................................................................................................................................................................................................................................................... 350
48 -44.200IDP04352 sensor histidine kinase [Bacillus anthracis str. `Ames Ancestor`] GBAA0584 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  25  244.................................................................................................................................................................................................................................................................................................................ELGSLAKTIEDLSSELTYMKKERGEFLASVAHELLTPLTYMKGYAKVAKRDSLTKEEEEYLQIIEDETDSVTDLVQDLFMLVQLEQHQFVIKKQKVLLRPFLERMVEKTKTTLTNKQMQLHVYCKD-DLEVCIDERRMEQVMLNLLHNAYQHSLETTITIRVLAETNSFTISVQDEGEGIPEGDIPHIFDRFYRVDKSRATGGKGIGLAVAKEIVELHNGSILVTSKLDVGTNFIIELPFE..................................................................................................................................................................................................................................................................... 487
49 -44.100IDP04243 sensor histidine kinase [Clostridium perfringens ATCC 13124] CPF_1140 [Clostridium perfringens ATCC 13124]  ali follow..  17  61...............................................................................................................................................................................IPNPQDRQFFEIGKNVLPPTPPNIIAILYRGDRVLSMNPNPYFDEDN-----LPDLGEESKSKVEQITFKGYKFRGVTISSRDIRVQLL------MNIDSEVQSINQLIKTIIMALVILIGIALVLSYILSSKVIKP--------IKKAYDKQVFFVQDASHEMKTPLAVIKGKLELLANSWDDEDHFEHISKMMSEVRDLEKLNSDLLLLSKEDIDN-SVNIVSFELEEFIEDLSEFYVDLAEVQEKNFIVNRPLTPVIVKWDYSKVKRMLIILLENAFKYTEEGKISLSFEEVNKNIKIIVCDNGIGIKEEDIGRIFDRFFRSADVRNIKGSGIGLSLLKSIGKTLGTDIKLYSKYGIGTKFEITIPKIL.................................................................................................................................................................................................................................................................... 417
50 -44.000IDP04661 sensor histidine kinase [Bacillus anthracis str. `Ames Ancestor`] GBAA0572 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  20  57...............................................................................................................................................................................KNADDKKLPKKIRGYPPIGDPRIMELTWLGNTVEID----IENGKRRFIFEDNLEKFSPKKLGTLQDIEVQGRYFRIFAFQKDAKIVQIARDITAEKEMHTLFLILVIGCSIGSLCAIGIGFFLAGRALVP--------------IQNSWEKQQQFVSDASHELRTPLAVIQSKTDILFQSPSAEEKAMDISTISKECRRLSKLVANLLLLARSDSNQIEMDKKIFELDKLLEEIVEPYKEIASYQEKEMILKVEY-DISFMGDRERIHQMMVILLDNAMKYTNEGHIQIDCTQTNSSIRIRVKDDGIGVKGEDIPKLFDRFYQGDKARASEGAGLGLSIANWIVEKHYGKISVESQWGEGTCFEVILPKNQ.................................................................................................................................................................................................................................................................... 414
51 -43.900IDP95462 sensor histidine kinase [Staphylococcus aureus subsp. aureus USA300_FPR3757] YP_494944 [Staphylococcus aureus subsp. aureus USA300_FPR3757]  ali follow..  21  217................................................................................................................................................................................................................................................................................................................DEIGTLQYHFNKMRESLGQVDQMRQHFVQNVSHEIKTPLTHIHHLLSELQQTSDKTLRQQYINDIYTITTQLSGLTTELLLLSELDNHQHLLFDDKIQVNQLIKDIIRHEQFAADEKSLIILADLESI--NFLGNQRLLHQALSNLLINAIKYTDVGAIDIALQHSHNNIIFTISNDGSPISPQAEARLFERFYKVSKHD--NSNGLGLAITKSIIELHHGTIQFTQSNEYVTTFTITLPNNSL................................................................................................................................................................................................................................................................... 457
52 -43.700IDP04433 sensor histidine kinase [Bacillus anthracis str. `Ames Ancestor`] GBAA5276 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  21  236................................................................................................................................................................................................................................................................................................................KNLHASNQDLRNELKKEQQLEQSRKEFMSMVSHELKTPIAAVMGQLDMIHGIGAYKDRDKYLKRSYEMMQDINILTEKMSELSKIQNPQFKPDLKVISLTNIIEDVMKKVDYFVSVKQLNVQSNIKQ-DVQVLADPKFIQTAIFNIISNAIHYTDHQHVYIKLYEKPNGYALEVLNTGSQIDEDKLAHLFEPFYRANPDKLVQGSGLGLYIVKQILDKHQFPYGIQNT-PQGVKCSIVFP....................................................................................................................................................................................................................................................................... 477
53 -43.700IDP04430 sensor histidine kinase [Bacillus anthracis str. `Ames Ancestor`] GBAA4921 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  26  235...................................................................................................................................................................................................................................................................................................................EEMRKKLKESIEMQTQYEENRKELISNISHDLKTPITSIIGYVEGIKDGVANEKMDKYLTTIHTKARHMDTLIDELFLFSKLDLNRVPFQFETVELNMFMQELIEEMQMDLSKEGIEVNLQLHASPLYVTADCEKINRVISNLIHNSVKYMEEKKITVTVSSDNNKVIVKVMDNGSGIESDTLPYIFERFYRAEQSRSTGGSGLGLAIAKQIIEEHGGNIWAESELGEGTSIFFSLEKVEKCGE................................................................................................................................................................................................................................................................ 484
54 -43.400IDP04302 sensor histidine kinase [Clostridium perfringens ATCC 13124] CPF_2503 [Clostridium perfringens ATCC 13124]  ali follow..  22  220................................................................................................................................................................................................................................................................................................................DEIEKLADSLNIMAEEIENREILKNEFISSVSHELRTPLTSIKGWAITLNNDFTDRETKMGFDIIEKEADRLSNMVEELLDFSKFVSGKIKLKYEEINLKEFIEYLRLYMNPRAEREHKELILKGITEDFIIVGDKDRLKQVFINIIDNAFKFTHEEKITIEFVYADEGIYINIIDTGCGISKEELPRVKEKFYKGKNSK--SQNGIGLSICDEIIALHEGTLEIYSELGKGTKVVIYLPKKLIRSVEDD............................................................................................................................................................................................................................................................. 469
55 -43.300IDP04662 sensor histidine kinase [Bacillus anthracis str. `Ames Ancestor`] GBAA0650 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  24  212................................................................................................................................................................................................................................................................................................................DEIGELSSSIQTLANDLHYMKTERSEFLASVAHELRTPLTYVRGYADIALKETTSPEQLRYLSIIKDESDYITNLVQDLFSLAQMEQHNFSIQVKEVHLHTFLTRISEKVNAMYKERYITVSFSCPP-TLLVNLDEQRFEQVVVNILNNAYRHSKESQIHISVIEENKRISITMEDEGEGIPPEDLPHIFERFYRVDKARATGGTGLGLSIVKEIVELHGGNITVTSEVDHGSCFTISLPSIKKHDYHQ.............................................................................................................................................................................................................................................................. 463
56 -43.200IDP91948 histidine kinase PnpS [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100000392 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  24  94...............................................................................................................................................................................SQQDQQYKDLAETMEVLLSHLTMGTFLVSAQGQMLLSSRSLPHYFPD-------VDGDISSLDDLKRMDIRNLVHQAFDQKTRLKQE-------VSGFHEGDLILEVTAVPVFSPTQSVEAVLVLLYDLTTIRTYE--------------KLNLAFVSNASHELRTPVTSIKGFAETIKGMSAEEEADDFLDIIYKESLRLEHIVEHLLTLSKAQQMPIQWT--TLSLAEFVQDLTQSLQPQLKKKDLQLKVQVPD-DVTLVSDSQLLSQILLNLLSNAIRYTEQGKIEVKTQKVNEGIKISVSDTGIGISQLEQDRIFERFYRVNKSRQTGGTGLGLAIVKELSQLLGGQVTVTSQLGRGSCFTIFLPNQSFAQD................................................................................................................................................................................................................................................................ 443
57 -42.900IDP04667 sensor histidine kinase [Bacillus anthracis str. `Ames Ancestor`] GBAA1313 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  23  216................................................................................................................................................................................................................................................................................................................DEIGRLGKAFNKMANSLETEDVKRKEFLANVSHELRTPLSYIKGYSEAILDGVAKGPQEKVTQLIHKEADRMQRLVHDLLDLAQLEGEHFPLQKQPIVFSQLIEDVLDTYEIKFIEKKIRISTNLNP-EIIVMIDEDRMQQVLHNVLDNAIRYTNQGDIMITLRQIDDYCELSIKDTGIGIDTEHLENLGERFYRVDKARQHGGTGLGLAIVRQIVHIHDGQWQIESEKGNGTTVSIKLKVQNEES................................................................................................................................................................................................................................................................. 464
58 -42.800IDP04515 putative sensor histidine kinase [Clostridium perfringens ATCC 13124] CPF_2673 [Clostridium perfringens ATCC 13124]  ali follow..  19  333................................................................................................................................................................................................................................................................................................................DDVNDLRLGYKELVEEGIKNEKLKTELISNVSHDLKTPLTSIINYVNILQLNNIKEEEKEYIEILDKKSQTLKKLIDDLFEVSKMSSGKVELFKYNIDIIQLVYQCIAEVEDVYSEKEIEFKINGPE-ECMVKIDPQRMSRVFQNLTTNALKYSLEKTVYVEIKDLENYVEISFKNISSYALDFDEKDILERFARGDESRN-EGSGLGLAIAKTIVELHNGKFRVECE---GDLFKAFVIIPKNKDDNNEE............................................................................................................................................................................................................................................................ 583
59 -42.700IDP04358 gene: creC; putative histidine kinase sensor [Yersinia pestis CO92] YPO0895 [Yersinia pestis CO92]  ali follow..  25  234................................................................................................................................................................................................................................................................................................................SELNDLALALESMRLKLDGKAYIE-QYVHTLTHELKSPLAAISGAAELLRESPPPETAQRFLINIEQQSARIQQLVDKMLVQARLESR-VDLQLSPLEISHILKQSFSAKEAQAVSRGVTLRLKSVD-NAMLIGDGLLLSQALNNLIDNALDFTPAGEISVSGERQDDTYLITVEDSGSGIPGYAQEKIFDRFYSLPRANSVKSTGLGLNFVREVAAIHQGSICLENRLPQGVSARLTLPL...................................................................................................................................................................................................................................................................... 472
60 -42.300IDP04189 sensor histidine kinase [Clostridium perfringens ATCC 13124] CPF_0225 [Clostridium perfringens ATCC 13124]  ali follow..  18  240...................................................................................................................................................................................................................................................................................................................NIMSENLDKYINEIKSAKLHQKKFFDNVSHEFKTPLTAIIGFSEIIPKLNDKEKIVQSSALIEKEGKRLLNLVEEILLLAKSNKNTFEIEYTYIDVKSLIEDCLKILKIKLDNYDIKVYRNYESF--FIYGDHDKTKQVFINIIDNAIKYSGCETLSISTKRSPNKMEVIIEDDGTGFIIK------------DEYVNPKGNGLGIKICKDIMQSQNYGFNIESELDVGTKVTLSFSIGKNNEIKEEDFNE......................................................................................................................................................................................................................................................... 476
61 -42.100IDP04481 gene: nmpB; phosphate regulon sensor protein PhoR [Yersinia pestis CO92] YPO3204 [Yersinia pestis CO92]  ali follow..  18  85.............................................................................................................................................................................RNRRRRRELALLIKRFRSGAESLPDAVVITTVDGNIF-----CNGLAQQLLGFRWPEDNGQHILNLLRYPEFSQYLQQQ------------TFSRPLTLQLNNGYYVEFRVMPYSEG-----QLLMVARDVTQMRQLE--------------GARRNFFANVSHELRTPLTVLQGYLEMMHDQELGPLRDKALGTMQEQTKRMDGLVKQLLTLSRIEAAPNVDLNERVDIPLMLKILQHEVQALS-NGRHEITFRVND-QLKVFGNEDQLRSAVSNLVYNAVNHTPETKIEVCWQQTPQGAQFQVSDNGPGIPPEHVPRLTERFYRVDKSRQTGGSGLGLAIVKHALSHHDARLEVMSEIGLGTRFIFTLPNRLIVPTVLVENAVKS....................................................................................................................................................................................................................................................... 438
62 -41.800IDP04659 sensor histidine kinase [Bacillus anthracis str. `Ames Ancestor`] GBAA0272 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  26  257...................................................................................................................................................................................................................................................................................................................NNMAEELMNNIEKERKLEKQKNELITNVSHDLRTPLTSIMGYLRLLRDSKYKEQHDEYTRIAFAKSEQLKNLIEDLFEYTKLTNEQVVLEKQEVCVNELLEQLIEELVPQAEEHGLTFVKKFPEERAYAAIDSEKMVRVFDNLLMNAIKYSKDDGIKVSLQRQRWEIQIVIANHSEEFTREELASLFERFYKKDQSRVTEGSGLGLAIAKSIVELQGGSIRAEYK-DGIIQFIVSLPIIE.................................................................................................................................................................................................................................................................... 500
63 -41.700IDP04012 gene: virJ; sensor histidine kinase [Clostridium perfringens ATCC 13124] CPF_2355 [Clostridium perfringens ATCC 13124]  ali follow..  23  241................................................................................................................................................................................................................................................................................................................NKIEEQIEKINEEKEKVLTLEKTRTEFFNNITHELKTPLTNISGYAQIMSEEDFHDNDKFALERINKESKRMHELIVSLIEISKNKSDIEGGEIENVNLKTLIEDLCEDFKVKGDKQGICISNNLEDI--EFMCREDEIRRIIINLLDNAIKYSIKSEIEISLFKDKEEKHIEIENLSDEISSEGVEKIFEPFYRENTKKELGGNGLGLYICSELVKKYGGDISFNYSNGKVK-VSIIFK....................................................................................................................................................................................................................................................................... 482
64 -41.400IDP04692 sensor histidine kinase [Bacillus anthracis str. `Ames Ancestor`] GBAA5105 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  22  122...................................................................................................................................................................................................................................................................................................................NVASEKLKEAVERGDFAESSKDQLVVNLAHDLRTPLTSVLGYLDLILKDENKEQIKHFSTIAYTKSQRLESLIDELFEITRMNYGMLQLNKKPIDISELLIQLDEELYPLLEKHHLEARLNVDP-HLPINGDGKLLARVFENLLTNAVRYGYDGQVDLNGYIDNEEVVVQVMNYGDSIPEEDLPYLFDMFYTGDKSRNRGGTGLGLFIAKNIVEQHNGTISAESNVV-RTIFEVRLPKDKKLT................................................................................................................................................................................................................................................................. 367
65 -41.400IDP04438 gene: cpxA; two component sensor kinase [Yersinia pestis CO92] YPO0073 [Yersinia pestis CO92]  ali follow..  19  201.................................................................................................................................................................................................................................................................................................ARGNLKQHPELESGPQEFLATGASFNQMISSLDRMVVAQQRLISDISHELRTPLTRLQLATALMRRRHGEGKE---LERIEMEAQRLDSMINDLLVLSRSQHKN-ELHREPIKADELWSDVLENAQFEAEQMGKTLVVTAPPGPWPLFCNPAALDSALENIVRNALRYSHHH-IAVAFSIDNQGVTIIVDDDGPGVSPEDREQIFRPFYRTDEARD-GGTGLGLAIVETAVSQHRGWVKAEDSPLGGLRLIVWLPLHPLKS................................................................................................................................................................................................................................................................. 458
66 -41.300IDP04007 sensor histidine kinase [Vibrio cholerae O1 biovar eltor str. N16961] VC1319 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  22  190................................................................................................................................................................................................................................................................................................................KSVGKLNHSFNMMADKISHLILSNKALTNAIAHDLRTPIFRIQWQAEVLAESQLNAKQQQQVASIIEDTEEMETMVDELLYYAKLEHPESDIQSQYLEVNQWLADFID---EQSHKSSLQIQYLPSLQPLMLDADPQLLTRALVNLIRNAEKYAG-DRLLIEASTVDAKLCIAIHDNGPGIEEQHWPHIFDAFYSTDSSRN-SGFGLGLAIVKQIMARHQGEVTLTKSPLGGACFSLWLPLYPNKLELPVNKQ.......................................................................................................................................................................................................................................................... 440
67 -41.200IDP04669 sensor histidine kinase KinD [Bacillus anthracis str. `Ames Ancestor`] GBAA1351 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  14  119..........................................................................................................................................................................DVSDRKYIQNALQTKKTTVSSVITDRVLGHQAIMIASPIFNRFDYISSSLNAIKPQYHFEVTDKYDVVFLDNNETSDAHSNMLTTPLQRLDWKVSVSPLPIHQKTLNQWVAVECIATLF-LMSILFLLAQYMLLKRQTKLERQQNELQK-----IELVGTFAASTAHEIRNPLTGIKGLVALLKEKYKDEQDQFYFSIIEQEIKRINEIVSEFLILGKPTATIEQ----TYDVRTILNEVALIIQSEANLHNIVFHLHLPDHPVHIRCSKDHMKQVVLNITKNAIEMTSGDTLTISVTSNETHAQLQIIDTGKGIPKHIQKHLFHPF-----TNKDTGTGLGLVICKRIVEMYNGHLFIDSIENEGTTVHAEIPLHIV................................................................................................................................................................................................................................................................... 498
68 -41.100IDP04331 sensor histidine kinase [Clostridium perfringens ATCC 13124] CPF_2181 [Clostridium perfringens ATCC 13124]  ali follow..  25  247...........................................................................................................................................................................................................................................................................................................LSNALDDLKIKNKKLEEDIEKERELEKLRKDFIAGASHELKTPIGIISGYAEGIKDGIVDHKDQGYLDIIIDEAEKMNKLVMDMLELSKLEAGKIDLHIIDFSLTELTEEVLVKNSVDINKNNLTVVKNYSP-DLYVQGDDFKIEQVLTNFVTNAIKYSPNNQIIIDIPVEEDKIYFSIENTGAHIPDSDINKIWTQFYRGDTSRGSRSTGLGLSIVKNLLQAHESEFGVMNT-ENGVKFYFTLKKSKEIDEVEE............................................................................................................................................................................................................................................................. 506
69 -40.900IDP04132 putative two-component system sensor kinase [Yersinia pestis CO92] YPO2997 [Yersinia pestis CO92]  ali follow..  19  206................................................................................................................................................................................................................................................................................................................DELTEVARDFDSMAERLQALVSAREQLLHDVSHELRSPLARLQLAIGLAHQNP--DNVDNALQRIEHESERLDKMIGELLALSRAENHSLADDDEYFDLQELVKVVVNDARYEAQLPGVEIQLEVAASEYTVKGNAELMRRAIENIVRNALRFSASGQVKVTLSALDKRYQIQVADQGPGVEENKLSSIFDPFVRVKSAMSGKGYGLGLAITHKVILAHGGQVEARNGEQGGLVITLRVPRWQA................................................................................................................................................................................................................................................................... 449
70 -40.900IDP04165 sensor histidine kinase [Vibrio cholerae O1 biovar eltor str. N16961] VC1521 [Vibrio cholerae O1 biovar El Tor str. N16961]  ali follow..  20  342.....................................................................................................................................................................................................................RDLFRPIERIHRVVKMVQLGKNQRIGQIGLDDKHELAQLAKQFDN-----MLDQLQQRNEEIVQAAHELEAKVQSRTASLQEKTAQLEHHIALLNQTRNKLVVHEKLA-----ALGELTAGIAHEINNPTAVILGNTELIRFEADASRVEEEIDAILLQIERIRNITRSLLQYSRQGGVQDEITWQ--HVNPIIDESITLVKTGSKKRDIEFVLELKAHNS-VEVNRHQLLQILVNLQMNAIHMNGKGRITIRSEDQNRGAVIHIEDQGCGIKPENLKRIFDPF-----TTKREGTGLGLSVSQSLLSQSGGEIKVQSELGVGSTFSIFLPSKNEAKLRETLLLQ......................................................................................................................................................................................................................................................... 677
71 -40.400IDP04678 sensor histidine kinase [Bacillus anthracis str. `Ames Ancestor`] GBAA2560 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  22  141...................................................................................................................................................................................................................................................................................................................NQIVEQLKVSIDEERQAEQAKSELITNVSHDLRTPLTSIVGYVNLIHHDNYEVELRHYIQVIYDKVTRLNALMNDLFEYTRVQNKELSLYSVPIDIVELLGQLTVQFRIQLQEANIDCRPFFPSKKLMVLADGDKLVRVFENLIINAIAYGNDGDIDITAYENNNMIAIDITNYGQPIPSTDLPHIFERFYRVEKSRNTGGSGLGLAIAKSIVELHKGTIEVYSD-DKKTTFTVKLQPYKC................................................................................................................................................................................................................................................................... 385
72 -40.300IDP04419 sensor histidine kinase SrrB, putative [Bacillus anthracis str. `Ames Ancestor`] GBAA2861 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  23  224...................................................................................................................................................................................................................................................................................................................NIMSEKLQEAHQDLTDRNEHLKRFMGDVTHELKTPIALVKAYSMGIKDGLDDGT---YIDTIIKQSDHISNLIEELLRFSKLERDVLQKE--EFSIKSLVQSILDKHKIELESKEINLQVNYNVGDAIVYADVNKMRMVFQNLISNAIKYTSNQNIKITLEDRNESVYFQIQNGMNAEHMKDIDKIWEPFYVLESSRDRSGTGLGLAIVKSIVERHGFDYGVVTI-GGEIRFYIHMK....................................................................................................................................................................................................................................................................... 456
73 -40.100IDP04397 sensor histidine kinase [Bacillus anthracis str. `Ames Ancestor`] GBAA3230 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  26  208................................................................................................................................................................................................................................................................................................................DEMYHLAQTFDKMFERLETSFESEKQFTSDASHELRTPTSVIISQCEYALSQRNNPKEEESLEVILKQSRKMSALISQLLLLARADQGNDTFQFECINMSELTEIVVEELSLMVQEASIDITTHIEE-DLFIKADQTLMMRLLMNLLTNAIAYSKAGTVHMQLFRDETNIIGKVSDNGIGISEQHITKIWDRFYRVDAART-GNTGLGLSMVKWIVELHGGEITVESGLGEGSTFTFKLPIEKQA.................................................................................................................................................................................................................................................................. 457
74 -40.100IDP04239 sensor histidine kinase [Clostridium perfringens ATCC 13124] CPF_1057 [Clostridium perfringens ATCC 13124]  ali follow..  27  172................................................................................................................................................................................................................................................................................................................SELKGLEDAINKLLDRMRDSYRQQARFVSDASHELRTPISVIQGYANMLDRWGKNDESEESIIAIKSESENMKNLVEQLLFLARGINGKTKLTIKEFSLNNMIDEVFEESKMIDKNHVYNYIES----HITVQGDMALLKQTARILVENATKYTEEGEITLKVENSKGEAYFSIQDNGIGMDENDVPHIFERFFRADTARKNGGTGLGLSIAKWIIDNHKGYFSVLSRKGIGTRITVYLPQNI.................................................................................................................................................................................................................................................................... 417
75 -39.400IDP04272 lantibiotic biosynthesis sensor histidine kinase, putative [Bacillus anthracis str. `Ames Ancestor`] GBAA3899 [Bacillus anthracis str. `Ames Ancestor`]  ali follow..  22  210...............................................................................................................................................................................................................................................................................................................LTSLVKMKDELNHSLRTQWNMETNRREQIAALAHDIKTPLTILRGNAELLNESMLDSNQKKCNEHILKSIDEMEIYMKSLLDITKCEEG-APLQFMQTDLRDFIHNIIEESAICVLGKQLNLIENVQDIPNFIPIDETALKRAIMNIMMNAIEYSTKGDLMFSVEMISEKLQFIVEDSGRGFTEEEMHSATEQFYRGDKSRN-DHHGMGLYIAKSFAKQHGGNLYLSSEKLHGAKVVLEIS....................................................................................................................................................................................................................................................................... 452

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Wyrwicz LS, Godzik A, Kloczkowski A, Rychlewski L. Support-vector-machine classification of linear functional motifs in proteins. J Mol Model 2006 Aug;12(4):453-61. Epub 2005 Dec 10.