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Query: gi|15895531|ref|NP_348880.1| ATP-dependent exonuclease synthesis protein AddB (CA_C2263) [Clostridium acetobutylicum ATCC 824] (Range: 501-1000), from C.acetobutylicum

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst EAVEKMVNEFRESGRQILANEYSQIWNIIIELMDQLVEVMGNEKVNLEQFSRILFIGIKEHKMGLIPSSLDQVLVGSIDRLKSHAIKILYIIGVNDGVFPSAAMEEGILSDRDREILNSKGVELAKDTKTQAMEQRFLVYTAITNSKEYLFLSYPIADYEGKTLRPSLIVNRVKTLFPKIVEKSDVIKIENDEESMKLISATVPTFNEMISSFRKEIDGEGEVSSIWHDVYRWYSKSDEWTGKCNNMFKAISYTNQVDYISEEKALKLYGGSLKMSVSRLEKYIECPFSYYVQYGLNIKDRKIFSLTPPDLGSFMHKVIDRFCETIKEENIDWNEVNDHICEEKIYKIVDQEIEGRGGSILNSSPRYSYIALRLKRILKRTVRIVAEQFKRGSFKPVGYEVSFENGGSYPPITVGLNDGSEVVLTGRIDRIDMMEKDGSTYIRIVDYKSGNKIFKLSDVYYGFDIQLLLYLNAILENENLDEEDKVLPGAILYFTMDDPILast
1 -22.500sp|Q9H790|DEM1_HUMAN Defects in morphology protein 1 homolog OS=Homo sapiens GN=DEM1 PE=2 SV=1  ali follow..  12  77..............................................................................................................................................................................................................................................................................HLKYLYVTDLATQNWCELQTAYGKELPGFLAPE-KAAVLDTGASIHLARELELHDLVTVPVTTKE----------------------------------------DAWAIKFLNILLLIPTLQSEGHIREFPV----------------EGVLLVGVIDELHYTAKGE---LELAELKTRRRPLPLEAQKKKDCFQVSLYKYIFDAMVQG.................... 231
2 -15.300sp|P51530|DNA2L_HUMAN DNA2-like helicase OS=Homo sapiens GN=DNA2 PE=1 SV=3 (Range: 151-450)  ali follow..  10  4..................................................................................................................................................................................................................................................................................................................RQMLIGTVLHEVFQKAINN---------SFAPEKLQELAFQTIQE--IRHLKEMYRLNLSQDEIKQEVEDYLCKWAGDFMHKNTSTDFPQMQLSLPSDNSKDNSTCNIEVVKSPRFGLKGKIDVTVGVKIKTKYKIMPLELKTGKESNSIEH-----RSQVVLYTLLSQERRAD------PEAGLLLY...... 185
3 -13.300sp|Q9BQP7|CT072_HUMAN Uncharacterized protein C20orf72 OS=Homo sapiens GN=C20orf72 PE=1 SV=1  ali follow..  12  132...................................................................................................................................................................................................................................................................................SVTRVQVFLLERWKQRMILELGEDGFKEYTSNVFLQGKRFHEALESILSPQETLKERDENLLKSGYIESVQHILKDVSG-----------------------------------------VRALESAV---------------HETLNYIGLLDCVAEYQGK----LCVIDWKTSEKPKPFIQSTFDNPLQVVAYMGAM.......................... 279
4 -10.900sp|Q8NFZ0|FBX18_HUMAN F-box only protein 18 OS=Homo sapiens GN=FBXO18 PE=1 SV=2 (Range: 751-1043)  ali follow..  11  69SGFKRYVTAAEDKELEAKIAVVEKYNIRIPELVQRIEKCHIEDL------------------------DFAEYILGTVHKAKGLEFDTVHVLDDFVKVPCARHNLPQLPHFRVESFSED---------------EWNLLYVAVTRAKKRLIMTKSLENLAGEYFLQAELTSNVLK..................................................................................................................................................................................................................................................................................................................................... 207
5 -9.550sp|Q7Z7L1|SLN11_HUMAN Schlafen family member 11 OS=Homo sapiens GN=SLFN11 PE=1 SV=2 (Range: 751-901)  ali follow..  10  34................TVEQIMTCVADTCRRFFDR-VAVLVSTAKEVEHYKYELLKAMRKKRVDACDMLGDHIVLDSVRRFSGLERSIVFGIHPRT---------------------------------ADPAILPNVLICLASRAKQHLYIFPWGGH...................................................................................................................................................................................................................................................................................................................................................... 151
6 -9.050sp|P51530|DNA2L_HUMAN DNA2-like helicase OS=Homo sapiens GN=DNA2 PE=1 SV=3 (Range: 1-300)  ali follow..  10  110...................................................................................................................................................................................................................................................................IDKDFGYLILYPDMLISGTSIASSIRCMRRAVLSETFRSSDPATRQM----IGTVLHEVFQKAINN--------SFAPEKLQELAFQTIQEIRHLKEMYRLNLSQDEIKQEVEDYLPSFCKWAGDFMHKNTSTDFPQMQLSLPSDNSKDNSTCNIEVVKPMDIELKGKIDGVKIHRGYKTKYKIMLELK.................................................... 300
7 -7.440sp|P0C7P3|SLN14_HUMAN Schlafen family member 14 OS=Homo sapiens GN=SLFN14 PE=2 SV=2 (Range: 751-912)  ali follow..  40................TTEQIANYVARKCHSLFQC-IAILCRRGEDRGRYRLALLKAMELIETPATGVWGSHIVLDSIQQFSGLERTVVFGLSPEC-----------------------------------DQSEEFHKLCFASRAIKHLYLLYEKRAA..................................................................................................................................................................................................................................................................................................................................................... 161
8 -6.140sp|P12757|SKIL_HUMAN Ski-like protein OS=Homo sapiens GN=SKIL PE=1 SV=2 (Range: 151-450)  ali follow..  15  9......................................VGGEKRLCLPQVLNSV---LREFTLQQINTVCDELYI-YCSRCTSDQLHILKVLGI----LPFNAPSCGLITLTDAQRLCNALLRPRTFPQNGSVLPAKSSLAQLKETGSAFEVEHECLGKCQGLFAPQFYVQP........................................................................................................................................................................................................................................................................................................................................ 134
9 -5.820sp|Q16512|PKN1_HUMAN Serine/threonine-protein kinase N1 OS=Homo sapiens GN=PKN1 PE=1 SV=2 (Range: 301-600)  ali follow..  16  96..........................................................................................................................................................................................................................................................................................................................................................................................................................................KLDNTVV----GQTSWKPCGPNAWDQSFTL-ELERARELELAVFLEDFLDNERHEVQLDMEPQGCLVAEVT... 175
10 -5.640sp|Q86XE3|EFHA2_HUMAN EF-hand domain-containing family member A2 OS=Homo sapiens GN=EFHA2 PE=2 SV=1  ali follow..  130......IGRTDIEDLDLYATSRERRFRLFASIECE-----GQLFMTPYDFILAVTTDEPKVAKTWKSLSKQELNQMLAETPPVWKGSSKLFRNLKE---------KGVIS----------------------YTEYLFLLCILTKPHAGFRIAFNMFDTDGNEMVDKKEFLVLQEIF---------RKKNEKREIKGDEEKRAMLRLQLYGYHSPTNSVLKTDAEELVSRSYWDTLRRNTSQALFSDLAERADDITSLVTDTTLLVHFFGKK-ELNFEDFYRFMDNLQTEVLEIEFLSYSNGMNTISEEDFAHILVENTSVFLENVRYSIPEEKGITFDEFRSFF-QFLNNLEDFAIALNMYNFASRSIGQDEFKRAVYVATGL--------KFSPHLVNTVFK--------IFDVDKD------DQLSYKE--------FIGIMKDRLHR................................................. 505

FFAS is supported by the NIH grant R01-GM087218-01
1 3 1 8 8 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.