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Query: [J] COG0016 Phenylalanyl-tRNA synthetase alpha subunit, from COG1018

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MREQLEALRDDAIKKIEQAQEKKVVQEIRVKYLGKKGPVTEVLRGMGKLSPEERPVIGQLANDVREAIGKAIESKMEALEQAEIHRKLQEETIDVTLPGRPVLKGGAHPLTATITEVEDLFIGLGFSVAEGPQIETDYYNFEALNLPKDHPARDMQDSFYFTDELLLRTQTSPVQARTMEKYKGKGPIKIICPGKVFRRDDDDATHSHQFMQIEGLYVDHGVRMSDLKGVLQAFAKSFFGEERSIRLRPSFFPFTEPSVEVDVSCGICHGDGCRVCKQTGWIEILGAGMVHPRVLEMSGFNPNEYSGFAFGMGVERLSMLKYGIDDIRHFYTNDRRFLAQFKRVLast
1 -6.240sp|Q9BRP7|FDXA1_HUMAN Ferredoxin-fold anticodon-binding domain-containing protein 1 OS=Homo sapiens GN=FDXACB1 PE=2 SV=3 (Range: 341-413)  ali follow..  16  2.................................................................................................................................................................QAKICLRPSLLVHVQDVIEVPDFLSGSLHILSGPVFQKCHILPFTMPAFHET--LGVNQNLKDGCLQSLLD................................................................................................................ 73
2 -5.350sp|Q8WXX7|AUTS2_HUMAN Autism susceptibility gene 2 protein OS=Homo sapiens GN=AUTS2 PE=1 SV=1 (Range: 1019-1132)  ali follow..  15  1..............................................................................................LASMPMTVGVTGIHPMNSILDRTRMMTPFMGISPLPGGEFPYPSFHWD----PIRDPLRDPYRELDIHRRDPLGRDFLLRNDPLHRLSTP----RLYEADRSFRREPHDYSHHHHHHH.................................................................................................................................... 114
3 -5.140sp|Q9H501|ESF1_HUMAN ESF1 homolog OS=Homo sapiens GN=ESF1 PE=1 SV=1 (Range: 423-539)  ali follow..  28.............................................................................................................................YEDCDGLEFESSCSFIDLRFIPDDEPKDVASEVNLTAYKPKYFTSAAMGTSTVEITWDETDHERITMLNRKFKKEELLDMDFQAY...................................................................................................................................... 117
4 -4.900sp|Q8TB52|FBX30_HUMAN F-box only protein 30 OS=Homo sapiens GN=FBXO30 PE=1 SV=3 (Range: 334-607)  ali follow..  16  3...QLREIIPSSALPNGTVQHILMPDDEGEGELCWKKVDLGDVKNVDVLSFSHAPSFNFLSNSCWSKPKEDKAVDTSDLEVAEDPMGLQGIDLITAALLFCLGDSPGGRGISDSRMADIYHIDVGTQTFSSAILATSTMVGEIASASACDHANPQLSNPSPFQTLGLDLVLECVA----RYQPKQRSMFTFVCGQLFRRKEF-SSHFKNVH-------------GDIHAGLNGWMEQ---------------PLAY--------------YGCTYSQRRFCPSIQGAKIIHDRHLRSFGVQPC......................................... 259
5 -4.730sp|Q14679|TTLL4_HUMAN Tubulin polyglutamylase TTLL4 OS=Homo sapiens GN=TTLL4 PE=1 SV=2 (Range: 574-654)  ali follow..  15  2......................................................................................................................................................................................................................................................LIYSLFPNVPPTIYFGTRDERVEKLPWEQRKLLRWKMSTVTPNIVKQTIGRSHFKISKRNDDWLGCWGHHMKSPSF--RSIR................ 81
6 -4.700sp|Q9NWL6|ASND1_HUMAN Asparagine synthetase domain-containing protein 1 OS=Homo sapiens GN=ASNSD1 PE=2 SV=2 (Range: 159-251)  ali follow..  8....................................................................................................................................................................................................................................................................................LANQWQEVPASGLFRIDLKSTVISGCIILQLYPW.................................. 41
7 -4.680sp|Q86W56|PARG_HUMAN Poly(ADP-ribose) glycohydrolase OS=Homo sapiens GN=PARG PE=1 SV=1 (Range: 911-976)  ali follow..  11  1.................................................................................................................................................................................................................IYSMHIFLTERKLTVGDVYKLLLRYYNEECRNCSTPGPDIKLYPFIYHAVE.................................................................................... 51
8 -4.630sp|O75603|GCM2_HUMAN Chorion-specific transcription factor GCMb OS=Homo sapiens GN=GCM2 PE=1 SV=1 (Range: 207-316)  ali follow..  21.........................................................................................................................................................................................................IPGQPCPSFPKSDVYKA--TCDLATFQGDKMPPFQKYSSPRIYLPRPPCSYELANPGYTNSSPYPTLYKDSTSIPNDTDWVHLNTL......................................................... 104
9 -4.620tr|E7EMV3|E7EMV3_HUMAN Uncharacterized protein OS=Homo sapiens GN=ZNF445 PE=4 SV=1 (Range: 124-220)  ali follow..  13  3.............................................................................................................................WRSCRGTLMGHP--------GGTRAPEPRCALDGYRSRSAQIWSLASPLRSSSALGDHLEPPYEIEARDFLAGQSDTPAAQMPALFPREGCPGDQVTPTRSL..................................................................................................................... 96
10 -4.460sp|Q2M1P5|KIF7_HUMAN Kinesin-like protein KIF7 OS=Homo sapiens GN=KIF7 PE=1 SV=2 (Range: 490-587)  ali follow..  12  3LQNQVARLEEENRDFLAALEDAMEQYKLQSDRLREQQEEMVELRLRLEL....................................................................................................................................................................................................................................................................................................... 51

FFAS is supported by the NIH grant R01-GM087218-01
1 2 5 9 6 3   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I. and Godzik A Connecting the Protein Structure Universe by Using Sparse Recurring Fragments. Structure (Camb.) (2005) Aug;13(8):1213-24