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Query: [P] COG0003 Oxyanion-translocating ATPase, from COG1018

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MRVILMTGKGGVGKTSVAAATGLRCAELGHKTLVLSTDPAHSLADSFDLELGHEPRLVKENLWGAELDALMELEGNWGAVKRYITQVLQARGLDGVQAEELAILPGMDEIFGLVRMKRHYDEADYDVLIIDSAPTGTALRLLSLPEVGGWYMRRFYKPLQGMSVALRPLVEPLFRPIAGFSLPDKEVMDAPYEFYEQIEALEKVLTDNTQTSVRLVTNPEKMVLKESLRAHAYLSLYNVSTDLVIANRILPETIDDPFFQRWKSNQQVYKQEIYDNFHPLPVKEAPLFSEEMCGLAALERLKDTLYKDEDPSQVYYKENTINIVQGSNNDYSLELYLPGIPKEQIQLNKTGDELNVRIGNHRRNLVLPQALAALSPAGAKMEDDYLKIRFAEAVKRLast
1 -79.9003igf_A mol:protein length:374 All4481 protein  ali model follow..  24  3.LILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAG-LAEPVLPLLLEQTLTPDPQQIAPNLEVVQFQSSVLLERNWEEVKKLEAQYLRTPIIKEVYGQELVVLPGMDSALALNAIREYDASGKYDTIVYDGTGDAFTLRMLGLPESLSWYVRRFRQLFVNSDLGKTIAESPLISSFFNVNWTADNFAQPTNQVNNFLDKGKEALADPKRVAAFLVTTADPLEVVSVRYLWGSAQQIGLTIGGVIQVSSQTE------------------GDLSAEFTPLSVTVVPDVTKGDWQIDALPNFVEQAEQAPKP------------ITIDTHNRQVRLFLPGFDKKQVKLTQYGPEVTVEAGDQRRNIFLPPALSGRPITGAKFQNNYLIISFLE.... 368
2 -70.5003zq6_A mol:protein length:324 PUTATIVE ARSENICAL PUMP-DRIVING ATPASE  ali model follow..  33  15.TFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDPAHSLSDSLEREIGHTPTKITENLYAVEIDPEVAMEEYQAKLQEQAAMNPGMGLDMQDQMDMASMSPGIDEAAAFDQFLRYMTTDEYDIVIFDTAPTGHTLRLLSFPEIMDSWVGKMIKIRRQIGSMAKAFKNILPF--MGDEEEEDRALQDMEATKKQINAAREVMSDPERTSFKMVVIPEEMSIYESERAMKALEKYSIHADGVIVNQVLPEESDCEFCNARRKLQQERLKQIREKFSDKVVAEVPLLKKEAKGIETLEKIAEQLYGEPEPE.................................................................................... 324
3 -69.5003ug6_A mol:protein length:349 arsenical pump-driving ATPase  ali model follow..  32  26TKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDPAHSLRDIFEQEFGHEPTKVKDNLYVVEIDPQKAMEEYKEKLKAQIEENPFLGEMLEDQLEMAALSPGTDESAAFDVFLKYMDSNEFDVVIFDTAPTGHTLRFLGMPEVMDKYMTKLIKLRKQMSGFMKMMKKLLPFGGKDEDIDYDKMLEELEKMKERIVRARNILSDPERTAFRLVVIPEEMSILESERAMKALQKYGIPIDAVIVNQLIPEDVQCDFCRARRELQLKRLEMIKEKFGDKVIAYVPLLRTEAKGIETLKQIAKILYGEEEKEEQKIEQKVGQ.......................................................................... 349
4 -68.6003ibg_A mol:protein length:348 ATPase, subunit of the Get complex  ali model follow..  24  26LRWIFVGGKGGVGKTTTSCSLAIQLAKVRKSVLLISTDPAHNLSDAFGQKFGKEARLVDSNLSAMEIDPNGSIQDLLASGDSQGDDPLAGLGMGNMMQDLAFSIPGVDEAMSFAEVLKQVKSLSYEVIVFDTAPTGHTLRFLQFPTVLEKALAKLSQLSSQFGPMLNSILGARGGL--PGGQNIDELLQKMESLRETISEVNTQFKNPDMTTFVCVCIAEFLSLYETERMIQELTSYGIDTHAIVVNQLLFPKSGCEQCNARRKMQKKYLEQIEELYEDFNVVRMPLLVEEVRGKEKLEKFSEMLVHPYVPPQL.................................................................................. 341
5 -67.2003a36_A mol:protein length:362 ATPase GET3  ali model follow..  25  18HKWIFVGGKGGVGKTTSSCSIAIQMAQPNKQFLLISTDPAHNLSDAFGEKFGKDARKVTNNLSCMEIDPSAALKDMNDMAVSRANNNGSDGQGGGALADLTGSIPGIDEALSFMEVMKHIKGETFDTVIFDTAPTGHTLRFLQLPNTLSKLLEKFGEITNKLGPMLNSFMG----------AGNVDISGKLNELKANVETIRQQFTDPDLTTFVCVCISEFLSLYETERLIQELISYDMDVNSIIVNQLLFAENDCKRCQARWKMQKKYLDQIDELYEDFHVVKMPLCAGEIRGLNNLTKFSQFLNKEYNPIT................................................................................... 342
6 -66.9005bw8_A mol:protein length:373 ATPase GET3  ali model follow..  25  31HKWIFVGGKGGVGKTTSSCSIAIQMAQPNKQFLLISTDPAHNLSDAFGEKFGKDARKVTNNLSCMEIDPSAALKDMNDMAVSRANNNGGSLLQGGALADLTGSIPGIDEALSFMEVMKHIKGETFDTVIFDTAPTGHTLRFLQLPNTLSKLLEKFGEITNKLGPMLNSFMG----------AGNVDISGKLNELKANVETIRQQFTDPDLTTFVCVCISEFLSLYETERLIQELISYDMDVNSIIVNQLLFAENDCKRCQARWKMQKKYLDQIDELYEDFHVVKMPLCAGEIRGLNNLTKFSQFLNKEYNPIT................................................................................... 355
7 -66.7002woo_A mol:protein length:329 ATPASE GET3  ali model follow..  22  19LKWIFVGGKGGVGKTTTSCSLAIQMSKVRSSVLLISTDPAHNLSDAFGTKFGKDARKVPDNLSAMEIDPNLSIQEMTEQADQQNPNNPL----SGMMQDLAFTIPGIDEALAFAEILKQIKSMEFDCVIFDTAPTGHTLRFLNFPTVLEKALGKLGGLSSRFGPMINQMGS-----IMGVNANEQDLFGKMESMRANISEVNKQFKNPDLTTFVCVCISEFLSLYETERMIQELTSYEIDTHNIVVNQLLLDPTTCPQCMARRKMQQKYLAQIEELYEDFHVVKVPQVPAEVRGTEALKSFSEMLVKPYVYPTSGKE............................................................................... 329
8 -66.5003iqw_A mol:protein length:334 Tail-anchored protein targeting factor Get3  ali model follow..  25  16LRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPAHNLSDAFSQKFGKEARLVEDNLYAMEIDPNGSMQDLLAGQTGDGDAGMGG---VGVMQDLAYAIPGIDEAMSFAEVLKQVNSLSYETIVFDTAPTGHTLRFLQFPTVLEKALAKVSQLSGQYGSLLNGILGGSGTL--PNGQTLSDVMEKLDSLRVTISEVNAQFKDERLTTFVCVCIPEFLSLYETERMIQELANYGIDTHCIVVNQLLFPKPGSEQCTARRRMQKKYLDQIEELYDEFNVVKMPLLVEEVRGKERLEKFSEMLIKPFVPPE................................................................................... 328
9 -63.7003io3_A mol:protein length:348 DEHA2D07832p  ali model follow..  21  18LKWIFVGGKGGVGKTTTSSSVAVQLAQPNEQFLLISTDPAHNLSDAFCQKFGKDARKVEPNLSCMEIDPEAAMSDLQQQASQYNNDPNDPLKSMMSDMTSFMEVLKHIKNQKVLEGEDNSNAISYKTIIFDTAPTGHTLRFLQLPSTLEKLLSKFKDLSGKLGPMLSMMGG----------GQQQDIFEKLNEVQKNVSEVNEQFTNPELTTFICVCISEFLSLYETERMIQELMSYNMDVNSIVVNQLLFAEGDDKRCESRWKMQKKYLDQMGELYEDYHLVKMPLLGCEIRGVENLKKFSKFLLKPYDPKA................................................................................... 337
10 -63.7003idq_A mol:protein length:369 ATPase GET3  ali model follow..  23  18HKWIFVGGKGGVGKTTSSCSIAIQMAQPNKQFLLISTDPAHNLSDAFGEKFGKDARKVTNNLSCMEIDPSAALKDMNDMAVSRANNNGSDGQGGGALADLTGSIPGIDEALSFMEVMKHIKRETFDTVIFDTAPTGHTLRFLQLPNTLSKLLEKFGEITNKLGPMLNSFMG----------AGNVDISGKLNELKANVETIRQQFTDPDLTTFVCVCISEFLSLYETERLIQELISYDMDVNSIIVNQLLFAENDCKRCQARWKMQKKYLDQIDELYEDFHVVKMPLCAGEIRGLNNLTKFSQFLNKEYNPIT----DGKVIYELEDKEGLVPRGSL........................................................... 362
11 -50.1001f48_A mol:protein length:589 ARSENITE-TRANSLOCATING ATPASE  ali model follow..  23  9.PYLFFTGKGGVGKTSISCATAIRLAEQGKRVLLVSTDPASNVGQVFSQTIGNTIQAIAPGLSALEIDPQAAAQQYRARIVDPIKGVLPDDVVEQLSGACTTEIAAFDEFTGL--LTDASLLTRFDHIIFDTAPTGHTIRLLQLPGAWSSFIDSNPEGASCLGPMAG-----------------------LEKQREQYAYAVEALSDPKRTRLVLVARLQKSTLQEVARTHLELAAIGLKNQYLVINGVLPKTANDTLAAAIWEREQEALANLPADLAGLPTDTLFLQPVNMVGVSALSRLLSTQPVASPSSDEYLQQRPDI---------------PSLSALVDDIARNEHGLIMLMG--KGGVGKTTMAAAIAVRLADMGFDVHLTTSDPAAH. 368
12 -24.9003kje_A mol:protein length:254 CO dehydrogenase/acetyl-CoA synthase complex, accessory protein CooC  ali model follow..  13  2..KLAVAGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDPDSCLGQTLGLSIEEAYAITPLIEMKDEIREKTGDGGLLILNPKVDGDLDKYGRYIDDKIFLIRMGEIKKGGSFLGSVVSALFLDKKEAVVMDMGAGIEHLTRGTAKAV---------------------------------------------------------------DMMIAVIEPNLNSIKTGLNIEKLAGDLGIKKVRYVINKVRNIKEEKLIKKHLPEDKILGIIPYNELFIELSLKGEEIWQSTNPAFVNLHDIYQKLRLE........................................................................................ 252
13 -20.9003fwy_A mol:protein length:314 Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein  ali model follow..  16  35.KVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDPKHDSTFTLTGSLVPTVIDV--------LKDVDFHPEELRPEDFVFEGFNGVMCVEAGGPPAGTGCGGYVVGQTVKLLKQHHLLDDTDVVIFDVLGDVVCGGFAAP---------------------------------------------------------------QHADQAVVVTANDFDSIYAMNRIIAAVQAKKVRLAGCVANRSRATDEVDRFCKETNFRRLAHMPDRRSRLKKKTLFEMDEDQDVLAARAEYIRLAESLWRGLDP..................................................................................... 282
14 -20.2001de0_A mol:protein length:289 NITROGENASE IRON PROTEIN  ali model follow..  14  2MRQCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCDPKADSTRLI----SKAQNTIMEMAAEAGTVEDLELEDVLKAGYGGVKCVESGGPEPGVGCAGRGVITAINFLEEEGAY-----EDDLDFVFYDVLGDVVCGGWAMP------------------------------------------------------------IRENKAQEIYIVCSGEMMAMYAANNISKGIVKYSVRLGGLICNSRNTDREDELIIALANKLGTQMIHFVDNVVQRAEIRRMTVIEYDPKQADEYRALARKVVD......................................................................................... 249
15 -19.9001cp2_A mol:protein length:269 NITROGENASE IRON PROTEIN  ali model follow..  15  1MRQVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPKADSTRLLLGGLAQKSVL-----TLREEGEDVELDSILKEGYGGIRCVESGGPEPGVGCAGRGIITSINMLEQLGAY-----TDDLDYVFYDVLGDVVCGGFAMP------------------------------------------------------------IREGKAQEIYIVASGEMMALYAANNISKGIQKYAKSGGVRLGGIIC---------SRKVANEYELLDAFAKELGSQLIHFVPEYDPTCEQAEEYRELARKVDA......................................................................................... 246
16 -19.8002ynm_A mol:protein length:301 LIGHT-INDEPENDENT PROTOCHLOROPHYLLIDE REDUCTASE IRON-SULFUR ATP-BINDING PROTEIN  ali model follow..  16  34ALVIAVYGKGGIGKSTTSSNLSAAFSKLGKKVLQIGCDPKHDSTFTLTHKMVPTVIDI--------LEEVDFHSEELRPQDFMFEGFNGVQCVESGGPPAGTGCGGYVTGQTVKLLKEHHLLEDTDVVIFDVLGDVVCGGFAAP---------------------------------------------------------------QHANYCLIVTANDFDSIFAMNRIVAAINAKKVRLGGVIANRS---------------AELDQIEKFNEKTGLKTMAHFR.............................................................................................................. 238
17 -19.2005u1j_B mol:protein length:322 Uncharacterized protein  ali model follow..  13  11.KVITIHNKGGVGKTTTTAIIAMGLGAMGKRVLLIDFDAQMSLTQIFVRE--EDRLKILESSHDVTQD-----KSAFALLRTMEPARIKFFHEGKGVKFGIDVIPGIQSEWNILRMLDLYRD-QYDYILIDTAPS--IKPILRASHYLLIPEDGTPEAFTAMRIFLNEALPKYILPRPEGGFYKYPRILGVTRVRRNSTAILMKHNKILEEELSNSELKDHVIYPPYFGADKDNEDYILSSRKEYLSDLIWRDEKRAPISEVFDKLFLVDDKVQKDLYAFFSKVFTEIPKEV........................................................................................................ 314
18 -19.2003pg5_A mol:protein length:361 Uncharacterized protein  ali model follow..  11  1MRTISFFNKGGVGKTTLSTNVAHYFALQGKRVLYVDCDPQCNATQLMEEQTESIYLDGLNDEVAERNSLAKTVYAIFVPLREGESQIAAEITPMRSERFGVDVLPGHPALSQIEDAHAMERDDRYDVIFFDVGPSLGPFNRFVTPTATDLFFHAFGNLARWFDAWVTQYAEIHEGNMA--------EWKKYSADVEAKTRPLRLGGFDGEGLRYLGYTTLEYVKRRANGQEQLVGAF------------------ERFRGRFAAEAERISNSLSKHSNSTLLGHVPHMHS.......................................................................................................... 302
19 -18.8003k9g_A mol:protein length:267 PF-32 protein  ali model follow..  13  22.KIITIASKGGVGKSTSAIILATLLSK-NNKVLLIDMDTQASITSYFYEKIEKLGINFTKFNIYEILKENVDIDSTIINVDNNLDLIPSYLTLHNFSEDKIEH----KDFLLKTSLGTL--YYKYDYIVIDTNPS---LDVTLKNALLC------------------------------------------------------------SDYVIIPMTAEKWAVESLDLFNFFVRKLNLFLPIFLIITRFKKNRTHKTLFEILKTKDRFLGTISEREDNRRIAENNNFDLNKDYIKEYENILEIFLK......................................................................................... 259
20 -18.3001wcv_1 mol:protein length:257 SEGREGATION PROTEIN  ali model follow..  17  6VRRIALANKGGVGKTTTAINLAAYLARLGKRVLLVDLDPQGNATSGLGVRAERGVYHLLQGEPLEGL----------------------------HPVDGFHLLPATPDLVGATALREALRDEGYDLVLLDAPPS--TLNALAAAEGVVVPVQAEYYALEGVAGLLATL-EEVRAGLNPRLRLLGILVTMYDGRTLLAQQVEAQLRAHFGEKVFWTVIPRNVRLAEAPSFGKTIAQHA.............................................................................................................................................................. 226
21 -18.1004v02_A mol:protein length:258 SITE-DETERMINING PROTEIN  ali model follow..  20  5..IVITSGKGGVGKTTLTANIGTALAKLGKKVLLIDAA-LRNLDMILG--LENRIVYDILDVLEGRVPYEKALVKDKRGLSLWLLPANQRANKDVIDIEKWNKT-----------VEEIKNSGNYDYILVDSPAEKGFQIAVSPAD-----------------------------------------------------------------KALIVVNPEVSSIRDADRVIGLLESMDKRNYKVIVNRIKWEMVKRGAMLS--------VEDIVDILKAEIIGIIP.............................................................................................................. 205
22 -17.1002xj4_A mol:protein length:286 MIPZ  ali model follow..  13  4TRVIVVGNKGGAGKSTIAVHLVTALLYGGAKVAVIDLDLRQRTSARFFE------------------NRRAWLDNKKIELPEPLALNLSDNDVA------LAERPEEEQVAGFEAAFARAMA-ECDFILIDTPGGDSAIDLVVTPMNDSFVFDMLGTVDPVTLELTKPSLYSLTVWEGRKQRALSGQRQAMDWVVLRNRLATTEARNRKRLEDRLNALAKRVGFRIGPGLRDRVIYRELFPFGLTIADLSPQVRPVPVSLQHLAARQELRALMHS......................................................................................................................... 263
23 -17.1002xit_A mol:protein length:294 MIPZ  ali model follow..  13  4TRVIVVGNKGGAGKSTIAVHLVTALLYGGAKVAVIDLDLRQRTSARFFE------------------NRRAWLDNKKIELPEPLALNLSDNDVA------LAERPEEEQVAGFEAAFARAMA-ECDFILIDTPGGDSAIDLVVTPMNDSFVFDMLGTVDPVTLELTKPSLYSLTVWEGRKQRALSGQRQAMDWVVLRNRLATTEARNRKRLEDRLNALAKRVGFRIGPGLRDRVIYRELFPFGLTIADLSPQVRPVPVSLQHLAARQELRALMHS......................................................................................................................... 263
24 -17.1004pfs_A mol:protein length:273 Cobyrinic Acid a,c-diamide synthase  ali model follow..  20  5.RVLAVANKGGVAKTTTVASIGAALTEQGRRVLLVDLDPQGCLTFSLGHDPDKLPVSVHEVL------GDVEPSAALVRTDEGMTLLPANIDLAGAEAMLLMRA---REYALKRALAKL--DGDFDVVIIDCPPS--TLNGLTAAHDVIVPLQCETLAHRGVGQFLRTI-SDVQQITNPDLKLLGALPTLYDSRTTHSRDVLLDVADRYELPVLAPPIPRTVRFAEA......................................................................................................................................................................... 223
25 -16.7001hyq_A mol:protein length:263 CELL DIVISION INHIBITOR (MIND-1)  ali model follow..  16  5..ITVASGKGGTGKTTITANLGVALAQLGHDVTIVDAD-----------------------ITMANLELILGMEGLPVTLQNVLAGEARIDEAIYVGPGGVKVVPALEGLRKAEKLEDVLTQESTDILLLDAPAERSAVIAIAAAQ-----------------------------------------------------------------ELLLVVNPEISSITDGLKTKIVAERLGTKVLGVVVNRITTLGIEMAKNEIEAILEAKVIGLIDPEVRRAAAYGKPVVLRSPNSARAIVELANYIAG......................................................................................... 234
26 -16.5002oze_A mol:protein length:298 Orf delta`  ali model follow..  14  39..ILNNYFKGGVGKSKLSTMFAYLTDKLNLKVLMIDKDLQATLTKDLAKTFKVELPRVN----FYEGLKNGNLASSIVHLTDNLDLIPGTFDLMLLPKLTRSWTFENESRLLATLLAPL--KSDYDLIIIDTVPTPSVYTNNAI-NNIQNYISYLIDLQEQFNPGLD-MIGFVPYLVDTDSATIKSNLEELYKVFQNIIKRSNKVSTWSKNGITEHKGYDKKVLSMYKNVFFEM.................................................................................................................................................................. 286
27 -16.4001g3q_A mol:protein length:237 CELL DIVISION INHIBITOR  ali model follow..  20  5..ISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGDTMANLSLVLGVD-----------------DPDVTLHDVLAGEANVEDAIYMT------QFDNVYVLPGAVDWEHVLKLPEVIKSDKFDFILIDCPAG-DAMSAMLSGE-----------------------------------------------------------------EALLVTNPEISCLTDTMKVGIVLKKAGLAILGFVLNRY................................................................................................................................................... 173
28 -16.2003ez9_A mol:protein length:403 ParA  ali model follow..  16  111PYVIFVVNKGGVSKTVSTVTLAHALRRHDLRILVIDLDPQASSTMFLDHTHSIGSIAMLNNLDAETLRKEVIRPTIVPGVDVIPASIDDGFVASQWRELVEEHLPGQNQYEILRRNIIDRVADDYDFIFIDTGPHLDPFLLLLTPTPPAQV----FHSTLKYLTRLPEMLEQLEEEGVEPRLSASIGFMSKMTGKRDHETSHSLAREVYASNILDSSLPRLDGFERCGESFDTVISAN.............................................................................................................................................................. 366
29 -16.2001ion_A mol:protein length:243 PROBABLE CELL DIVISION INHIBITOR MIND  ali model follow..  22  5..ISIVSGKGGTGKTTVTANLSVALGEMGRKVLAVDGDTMANLSLVLGVD------DVNITLHDVLAGDAKLEDAIYMTQFENVYILPGAVDWEHVIKADPRKLPEVIKSL----------KGKYDFILIDCPAG-RAMSAMLSGE-----------------------------------------------------------------EAILVTNPEISCLTDTMKVGMVLKKAGLAILGFILNRY................................................................................................................................................... 173
30 -16.2003q9l_A mol:protein length:260 Septum site-determining protein minD  ali model follow..  20  5..IVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAIGRNLDLIMG--CERRVVYDFVNVIQGDATLNQALIKDKRTENLYILPASQTRDKDALTREG------------VAKVLDDLKAMDFEFIVCDSPAETGALMALYFAD-----------------------------------------------------------------EAIITTNPEVSSVRDSDRILGILASKSRRAEHLLLTRY-----------NPGRVSRGDMLSMEDVLEILRIKLVGVIPEDQSVLRASNQ................................................................................................ 223
31 -16.1003vx3_A mol:protein length:248 ATPase involved in chromosome partitioning, ParA/MinD family, Mrp homolog  ali model follow..  21  22..IPVVSGKGGVGKSLVSTTLALVLAEKGYRVGLLDLD-GASDHVILGFE-------------------PKEFPEEDRGVVPPTVHGIKFMTIAYYTEDRPTPLRGKEISDALIELLTITRWDELDYLVIDMPPGLGDQLL-------------------------------------------------------------DVLRFLKRGEFLVVATPSKLSLNVVRKLIELLKEEGHKVIGVVEN..................................................................................................................................................... 187
32 -16.0004rz2_A mol:protein length:295 Site-determining protein  ali model follow..  21  27..IAVTSGKGGVGKSNVSLNFSLSLSKLGFRVLLLDMD-MGNIDILLGESSSLALADW--------FSARLPLSELVKSGPEHLSYIAGGTGAAQWQGLDTASIDRF-----LTELQAV--ASQYDYLIFDMGASGERLYFLKSVD-----------------------------------------------------------------DVFVVTTPEPTAMTDAYAMMKYMHAAGSEAPSVIVNRAGKEREGYEVFERLKHVTGRFLN............................................................................................................................. 219
33 -15.6005j1j_A mol:protein length:285 Site-determining protein  ali model follow..  19  18..IAVTGGKGGVGKTNVSVNLALALADLGRRVMLLDAD-LANVDVLLGLTPKRTLADV--------IEGRCELRDVLLLGPGGVRIVPAASGTQSM-----VHLSPMQHAGLIQAFSDI--SDNLDVLVVDTAAGDSVVSFVRAAQ-----------------------------------------------------------------EVLLVVCDEPTSITDAYALIKLLRDHGMTRFRVLANMAHSPQEGRNLFAKLTKVTDRFLD............................................................................................................................. 210
34 -15.4003ez7_A mol:protein length:398 Plasmid partition protein A  ali model follow..  14  108AYVIFISNKGGVSQTTSTVSLAHAMRAEDLRILVIDLDPQSSATMFLSHK-ATSAQAMLQNVSREELLEEFIVPSVVPGVDVMPASIDDAFIASDWRELCNEHLPGQNIHAVLKENVIDKLKSDYDFILVDSGPHLDAFALASANILFTPLPPATVDFHSSLKYVARLPELVKLISDEGCECQLATNIGFMSKLSNKADHCHSLAKEVFGGDMLDVFLPRLDGFERCGESFDTVISAN.............................................................................................................................................................. 363
35 -15.3003ez2_A mol:protein length:398 Plasmid partition protein A  ali model follow..  15  108AYVIFISNKGGVSKTVSTVSLAHAMRAEDLRILVIDLDPQSSATMFLSHK-ATSAQAMLQNVSREELLEEFIVPSVVPGVDVMPASIDDAFIASDWRELCNEHLPGQNIHAVLKENVIDKLKSDYDFILVDSGPHLDAFALASANILFTPLPPATVDFHSSLKYVARLPELVKLISDEGCECQLATNIGFMSKLSNKADHCHSLAKEVFGGDMLDVFLPRLDGFERCGESFDTVISAN.............................................................................................................................................................. 363
36 -15.2005u1g_D mol:protein length:214 ParA  ali model follow..  16  1MKVISFLNKGGSGKTTAVINIATALSRSGYNIAVVDTDPQMSLTNWSKAGKAAFDV-----FTAASEKDVYGIRK---------------------------------------------DLADYDFAIVDGAGSLSVIDLVIIPSAAGSVVTVLEAQAYSRKVEARFLITRKIEMATMLNVLKESIKDTGVKAFRTAITQRQVYVKSILDGDSVFESSDGAAKGEIEILTKEIVRI............................................................................................................................................................... 204
37 -15.1003cwq_A mol:protein length:209 ParA family chromosome partitioning protein  ali model follow..  12  1MIITVASFKGGVGKTTTAVHLSAYLALQG-ETLLIDGDPNRSATG-FKVVDERQAAKYAPKYQNIVIDTQARPEDEDLEALADGCDLL-----------VIPSTPDALALDALMLTIETLQKLG--RILLTIIPPYPSKDGDEARQLLTTA----LPLFKRGIKRYSAFQKASLNGVVVSEVSDSKAGIAWSDYKATGKEIVEEILTLE........................................................................................................................................................................................... 203
38 -15.0003kb1_A mol:protein length:262 Nucleotide-binding protein  ali model follow..  21  21..IAVMSGKGGVGKSTVTALLAVHYAKQGKKVGILDAD-GPSIPHLFGLE-KGKVAVSDEGLEPVLTQRLGIKVMSIQFLLP--------------KRETPVIWRGPLIAGMIREFLGRVAWGELDYLLIDLPPGTGDAPL-------------------------------------------------------------TVMQDAKPNGAVIVSTPQELTAAVVEKAITMAEQTKTAVLGIVEN..................................................................................................................................................... 190
39 -14.9002ph1_A mol:protein length:262 Nucleotide-binding protein  ali model follow..  22  21..IAVMSGKGGVGKSTVTALLAVHYARQGKKVGILDAD-GPSIPILFGLR-NARIAVSAEGLEPVLTQKYGIKVMSMQFLLP--------------KENTPVIWRGPLIAGMIREFLGRVAWGELDHLLIDLPPGTGDAPL-------------------------------------------------------------TVMQDAKPTGVVVVSTPQELTAVIVEKAINMAEETNTSVLGLVEN..................................................................................................................................................... 190
40 -14.5003cio_A mol:protein length:299 Tyrosine-protein kinase etk  ali model follow..  19  95.NILMITGATDSGKTFVSSTLAAVIAQSDQKVLFIDADRRGYSHNLFTVSNEHGLSEY--------LAGKDELNKVIQHFGKGGFDVITR-----------QVPPNPSELLMRDRMRQLLENDHYDLVIVDTPP------MLAVSD--------------------------------------------------------AAVVGRSVGTSLLVARFGLNTAKEVSLSMQRLEQAGVNIKGAILNGV................................................................................................................................................... 266
41 -14.1003fkq_A mol:protein length:373 NtrC-like two-domain protein  ali model follow..  14  140..VIFTSPCGGVGTSTVAAACAIAHANMGKKVFYLNIEQCGTTDVFFQAEGNATMSDVIYSLKSRKANLLLKLESCIKQSQEGVSYFSSTKVALDILE-------SYADIDTL--IGNIQGMDNYDEIIVDLPFEIEKLKLLSKAWRIIVVNDGSQLSNYKFMRAYESVVLL---------------QNDDINIIRNMNMIYNKFSNKNSEMLSNISIKTIGGAPRYEHATVRQIIEALTKMEFFEEIL................................................................................................................................................... 366
42 -13.9003la6_A mol:protein length:286 Tyrosine-protein kinase wzc  ali model follow..  16  87.NVLMMTGVSSIGMTFVCANLAAVISQTNKRVLLIDCDRKGYTHELLGTNNVNGLSEI--------LIGQGDITTAAKPTSIAKFDLIPR-----------QVPPNPSELLMSERFAELVNSKNYDLVLIDTPP------ILAVTD--------------------------------------------------------AAIVGRHVGTTLMVARYAVNTLKEVETSLSRFEQNGIPVKGVILNSI................................................................................................................................................... 258
43 -13.4004jmp_A mol:protein length:269 C-terminal fragment of CapA, Protein tyrosine kinase  ali model follow..  18  77..IVITSEAPGAGKSTIAANLAVAYAQAGYKTLIVDGDRKPTQHYIFNLPNNEGLSSLLLN-------------------WSTYQDSIISTEIEDLDVLTSGPIPNPSELITSRAFANLYDTMNYNFVIIDTPP------VNTVTD--------------------------------------------------------AQLFSKFTGNVVYVVNSENNNKDEVKKGKELIEATGAKLLGVVLNRM................................................................................................................................................... 246
44 -13.2004jlv_A mol:protein length:269 C-terminal fragment of Membrane protein CapA1, Putative uncharacterized protein capB1  ali model follow..  20  79..LLVTSEKPGAGKSTVVSNVAITYAQAGYKTLVIDGDRKPTQNYIFNEQNNNGLSSLIIG-------------------RTTMSEAITSTEIENLDLLTAGPVPNPSELIGSERFKELVDLKRYDIIIVDTPP------VNTVTD--------------------------------------------------------AQLYARAIKDSLLVIDNEKNDKNEVKKAKALMEKAGSNILGVILNKT................................................................................................................................................... 248
45 -13.1002ved_A mol:protein length:271 MEMBRANE PROTEIN CAPA1, PROTEIN TYROSINE KINASE  ali model follow..  20  79..IVITSEAPGAGMSTIAANLAVAYAQAGYKTLIVDGDRKPTQHYIFNLPNNEGLSSL--------LLNWSTYQDSIISTEIEDLDVLTS-----------PIPPNPSELITSRAFANLYDTMNYNFVIIDTPP------VNTVTD--------------------------------------------------------AQLFSKFTGNVVYVVNSENNNKDEVKKGKELIEATGAKLLGVVLNRM................................................................................................................................................... 248
46 -12.8003ea0_A mol:protein length:245 ATPase, ParA family  ali model follow..  14  7..FGFVSAKGGDGGSCIAANFAFALSQEDIHVLAVDISLPFGDLDMY-LSGNTHSQDLADISNASDRLDKSLLDTMVQHISPSLDLIPSPATFEKIVNIEPERVSDLIHIA----------ASFYDYIIVDFGADHVGVWVLEHLD-----------------------------------------------------------------ELCIVTTPSLQSLRRAGQLLKLCKEFEKPISEIILNRA-------------DTNSRITSDEIEKVIGRPISKRIP.............................................................................................................. 206
47 -12.5004yds_A mol:protein length:228 Flagella-related protein H  ali model follow..  12  21.ASIMIEGDHGTGKSVLSAQFVLGFLLSDKKGYVITTE--------------QTTKDYLIKMKEIKIDLIPYFIRGKLRIAPLNTKKFNWNSSL----------------KILDVIVNFIRSKNIDFIVIDS----SILAAFSKEKQLLQFMKDIRVLVNTGKMIL----------TIHPDTFDEEMKSKITSIVDVYLKLSAATIGGRRVKILERVKTTGGISGSDTISFDVDPALGIKVVPLSLSR.................................................................................................................................................... 227
48 -11.6001nks_A mol:protein length:194 ADENYLATE KINASE  ali model follow..  12  1MKIGIVTGIPGVGKSTVLAKVKEILDNQGINNKIINYG------------------------------------DFMLATALKLGYAKDRDEMRKLSVEKQKKL----QIDAAKGIAEEARAGGEGYLFIDT--PSGYLPGLPSYVITEINPSVIFLLEADPKIILSRQKR------TTRNRNDYSDESVILETINFARYAATASAVLAGSTVKVIVNVEGDPSIAANEIIRSMK................................................................................................................................................................. 194
49 -11.6005hci_A mol:protein length:261 GPN-loop GTPase 1  ali model follow..  14  5...IICIGMAGSGKTTFMQRLNSHLRAEKTPPYVINLDPALRVPYGANIDI-RDSIKYKKVMENYQLGPNGAIVTSLNLFSTKIDQVIRLVEKKDKFQNCIIDTPGQIECFVWSASGAIITES---AYIVDTPRNSSPTTFMS---NMLYACSILYKTKLPMIVVFNKTDVCKADFAKEWMTDFESFQAAIKEMSSLVNSMSLMLEE-SQLDVVGVSSFTGDGFDEFMQCVDKKVDEY.............................................................................................................................................................. 249
50 -11.5002w0m_A mol:protein length:235 SSO2452  ali model follow..  13  24.FFIALTGEPGTGKTIFSLHFIAKGLRDGDPCIYVTTE--------------ESRDSIIRQAKQFNWDFEEYIEKKLIIIDALMKEKEDQWSLVNLTPEEL-----------VNKVIEAKQKLGYARLVIDSVSA-----FLDKPAMARKISYYLKRVLNKWNFTIYATSQYAITTSQAFGFGVEHVADGI--------RFRRMIRNGELHRYILIEKMRQTDHDKHVWEIDIVNGKGIVL........................................................................................................................................................... 229
51 -10.6002dr3_A mol:protein length:247 UPF0273 protein PH0284  ali model follow..  11  24.NVVLLSGGPGTGKTIFSQQFLWNGLKMGEPGIYVALE--------------EHPVQVRQNMAQFGWD----VKPYEEKGMFAMVDAFTAGIGKSKEYEKYIVHDLTDIREFIEVLRQAIRDINAKRVVVDSVTT-----YINKPAMARSIILQLKRVLAGTGCTSIFVSQVSVGERGFGGPGVEHGVDGIIRL--------DLDEIDGELKRSLIVWKMRGTSHSMRRHPFDITDKGIIV........................................................................................................................................................... 233
52 -10.5004wia_A mol:protein length:233 Putative flagella-related protein H  ali model follow..  14  28.SLIIIEGEESTGKSVLCQRLAYGFLQNRYSVTYVSTQ--------------LTTLEFIKQMNSLNYSINKKLLSGALLYIPVYPLIADNKKKDGF----------------LKKVMETRAFYEKDVIIFDSISA..................................................................................................................................................................................................................................................................... 131
53 -10.4001yr6_A mol:protein length:262 ATP(GTP)binding protein  ali model follow..  11  11...VVFVGTAGSGKTTLTGEFG-RYLEDNYKVAYVNLDTGVDVREFVTVEEIMREGYGPNG-----VESYDRLMEKFNEYLNKILRLEKE------NDYVLIDTPGQMETFLFHEFGVRLMENLPYVYISDPEILKKPNDYCFVRFFALLIDLRLGATTIPALNKVDLLSEEEKERHRKYFEDIDYLTARLKLDPSMQGLMAYKMCS-PPVRVLYLSAKTREGFEDLETLAYEHYCTC.............................................................................................................................................................. 252
54 -10.4004zja_A mol:protein length:147 Aggregation suppressing protein  ali model follow..  16  18......................................................................................................................................................................................................................................................................................................FSDRFNRIDRLFSQLTGDTPVAATPAYDLQKRDANNYLLTVSVPGWKEEELEIETVGGNLNITKADFQLSFSLPEHA---KVNNAKLEQGLLLVEIYQEIPE 136
55 -10.3001shs_A mol:protein length:147 SMALL HEAT SHOCK PROTEIN  ali model follow..  28  49.....................................................................................................................................................................................................................................................................................................................................EGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAEEIYRTIKLPATVKEENAS-AKFENGVLSVILPKAESS 139
56 -10.3004zj9_A mol:protein length:150 Aggregation suppressing protein  ali model follow..  16  16.......................................................................................................................................................................................................................................................................................................SDRFNRIDRLFSQLTGDTPVAATPAYDLQKRDANNYLLTVSVPGWKEEELEIETVGGNLNITKADFQLSFSLPEHA---KVNNAKLEQGLLLVEIYQEIPE 133
57 -10.3002zts_A mol:protein length:251 Putative uncharacterized protein PH0186  ali model follow..  13  31.TTVLLTGGTGTGKTTFAAQFIYKAEEYGEPGVFVTLE--------------ERARDLRREMASFGWDFEKYEKEGKIAIVDGVSSVVGLPSEEKFVLEDRFNVDNF-----LRYIYRVVKAINAKRLVIDSIPS--IALRLEEERKIREVLLKLNTILLEMG-----VTTILTTEAPDPQHGKLSRYGIEEFIARGVIVLDLQEKNIELKRYVLIRKMRETRHSMKKYPFE-IGPNGIVV........................................................................................................................................................... 244
58 -10.2004fei_A mol:protein length:102 Heat shock protein-related protein  ali model follow..  21  6..............................................................................................................................................................................................................................................................................................................................TPAADWRDAGTHLDLLLDVPGVDAGTLALAEDGGQLTVSSGRFVRELAFPEPVRPASGV-ASLAGGVLTVRFEKLRPT 97
59 -10.2001rz3_A mol:protein length:201 hypothetical protein RBSTP0775  ali model follow..  12  24..VLGIDGLSRSGKTTLANQLSQTLREQGISVCVFHMDDHIVERAKRYHTGNEEW----FEYYYLQWDVEWLTHQLFRQLKASHQLTLPFYDHETDTHSKRTVYLSDSDMIMIEGVFLQRKEPFFDFVYLDCPREIRFAREND-KQNIQKFINRYWKAEDYYLETEEPIKRA................................................................................................................................................................................................................................ 193
60 -10.1004eld_A mol:protein length:161 Small heat shock protein HSP16.5  ali model follow..  25  57...............................................................................................................................................................................................................................................................................................................................MPISIIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAEEIYRTIKLPATVKEENAS-AKFENGVLSVILPKAESS 153
61 -10.0003b85_A mol:protein length:208 Phosphate starvation-inducible protein  ali model follow..  15  23.TIVFGLGPAGSGKTYLAMAKAVQALQSKQVSRIILTRPAVEAGEKLGFLPG---------------TLNEKIDPYLRPLHDALRDMVEPEVIPKLMEA------GIVEVAPLAYMRGRTLNDAF--VILDEAQTPAQMKMF.............................................................................................................................................................................................................................................................. 142
62 -9.8902i3b_A mol:protein length:189 Human Cancer-Related NTPase  ali model follow..  14  1ARHVFLTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTRGPLSRVGLEPPPGKRECRVGQYVVDLTSFEQLA-------------------LPVLRNADCSSGPGQRVCVID----------------------EIGKMELFSQLFIQAVRQTLST-------PGTIILGTIPVPKGKPLALVEEIRNRKDVKVFNVTKENRNHLLP--DIVTCVQS................................................................................................................................................................ 186
63 -9.8804rzk_A mol:protein length:90 Small heat shock protein hsp20 family  ali model follow..  16  8..............................................................................................................................................................................................................................................................................................................................EPLADVIEKGDEIKVVAEVPGVNKEDIKVKVTNGGKKLVIRQYYKEIDLPAEVDEKAAK-ANFKNGVLEITLKKKAS. 89
64 -9.8403a4l_A mol:protein length:260 L-seryl-tRNA(Sec) kinase  ali model follow..  10  4IMLIILTGLPGVGKSTFSKNLAKILSKNNIDVIVLGSDLIRESFPVWKEKYEEFIKKSTYRLYWVIVDDTNYYNSMRRDLINIAKKYLDVLIRRNIERGEKIPNEVIKKMYEKFDEPGKKYKWDEPFLIIDTTKD------IDFNEIAKKLIEKSKEIPKFYVLEENKNKN--NNISDKIDKETRKIVSEYIKSKKLDKDKIKEVVELRKEFLKKIKKMEEVDADRVLKEFKDLLNSYLE............................................................................................................................................................ 254
65 -9.7703aab_A mol:protein length:123 Putative uncharacterized protein ST1653  ali model follow..  22  25...............................................................................................................................................................................................................................................................................................................................PPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIRPKYVRKVIRLPYNVAKDAEISGKYENGVLTIRIPIAGTS 118
66 -9.7404ylb_A mol:protein length:128 Heat shock protein Hsp20  ali model follow..  16  30...............................................................................................................................................................................................................................................................................................................................PPIDMYEEGGELVVVADLAGFNKDKISVRLSAQNELIRPLKIHKVIRLPVKVKRDSQVTDKYENGVLTIRIPVEGSV 123
67 -9.7403vqk_A mol:protein length:123 Small heat shock protein StHsp14.0  ali model follow..  22  25...............................................................................................................................................................................................................................................................................................................................PPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIRPKYVRKVIRLPYNVAKDAEISGKYENGVLTIRIPIAGTS 118
68 -9.6701grq_A mol:protein length:178 CHLORAMPHENICOL 3-O PHOSPHOTRANSFERASE  ali model follow..  10  4.RMIILNGGSSAGKSGIVRCLQSVLPE---PWLAFGVDSIGPEFRALEGAWAEGVVAMARAGARIIIDDVFLGGAAAQERWRSFVGDLDVLWVGAVAEGRETARGDRVAGMAAKQAYVVHEGVEYDVEV-DTT--------KESIECAWAIAAHVVP............................................................................................................................................................................................................................................... 178
69 -9.6401ki9_A mol:protein length:192 adenylate kinase  ali model follow..  12  4.KLVVVTGVPGVGGTTITQKAMEKLSEEGINYKMVNFG-------------------------------------------TVMFEVAQEENLVEDRDQMRKLDPDTQKRIQKLAGRKIAEMVKESPVVVDT--PKGYLPGLPVWVLNELNPDIIIVVETSGDEILIRRLN-------ETRNRDLETTAGIEEHQIMNRAAAMTYGVLTGATVKIIQNKNNLLDYAVEELISVLR................................................................................................................................................................. 192
70 -9.4105he8_A mol:protein length:174 Helicase loader  ali model follow..  12  28...LYLYGPFGTGKSFILGAIANQLKSKKVRSTIIYLEFIRTLKGGFKDGSFEKKLHRVREANILMLDDIGAEEVTPWVRDEVIGPLLHYRMVHELPTFFSSNFDYSELEHHLAMTRDGEEKTKAARIIERVKSLSTPYFL............................................................................................................................................................................................................................................................... 166
71 -9.3803gt6_A mol:protein length:103 Low molecular weight heat shock protein  ali model follow..  25  8...............................................................................................................................................................................................................................................................................................................................PRVDIKEEVNHFVLYADLPGIDPSQIEVQMDKGILSIRYGSFHRRFALPDSADADGIT-AAGRNGVLEIRIPKRPA. 102
72 -9.3705jwo_A mol:protein length:247 Circadian clock protein kinase KaiC  ali model follow..  12  33.ATTLVSGTSGTGKTLFAVQFLYNGITINEPGIFVTFE--------------ESPQDIIKNALSFGWNLQSLIDQGKLFILDASPDPDGQEVAGDFDLSAL-----------IERIQYAIRKYKATRVSIDSVTA--VFQQYDAASVVRREIFRLAFRLAQLGVTT...................................................................................................................................................................................................................................... 171
73 -9.3502w58_A mol:protein length:202 PRIMOSOME COMPONENT (HELICASE LOADER)  ali model follow..  23  57...LYLHGSFGVGKTYLLAAIANELAKRNVSSLIVYVELFRELKHSLQDQTMNEKLDYIKKVPVLMLD........................................................................................................................................................................................................................................................................................................................................ 122
74 -9.2802cvf_A mol:protein length:220 DNA repair and recombination protein radB  ali model follow..  19  21.VLTQVYGPYASGKTTLALQTGL---LSGKKVAYVDTEGGFSPERLMAETRGLNPEEALSRFILFTPSDFKEQRRVIGSLKKTVDSNFALVVVDSITAHYRAEENRSGLIAELSRLLWIARKHNIPVIVIN......................................................................................................................................................................................................................................................................... 153
75 -9.2401kht_A mol:protein length:192 adenylate kinase  ali model follow..  12  4.KVVVVTGVPGVGSTTSSQLAMDNLRKEGVNYKMVSFG-------------------------------------------SVMFEVAKEENLVSDRDQMRKMDPETQKRIQKMAGRKIAEMAKESPVAVDT--PKGYLPGLPSWVLNELNPDLIIVVETTGDEILMRRMSDETRV------RDLDTASTIEQHQFMNRCAAMSYGVLTGATVKIVQNRNGLLDQAVEELTNVLR................................................................................................................................................................. 192

FFAS is supported by the NIH grant R01-GM087218-01
1 2 5 3 1 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Plewczynski D, Tkacz A, Godzik A., Rychlewski L. A support vector machine approach to the identification of phosphorylation sites. Cell Mol Biol Lett. 2005;10(1):73-89.