current user: public

Please be advised that we have recently moved our server to a new location. We tried our best to fully test all functions on the website, but if something does not work for you please let us know.

Query: [P] COG0003 Oxyanion-translocating ATPase, from COG0516

Results of FFAS03 search in PDB0516
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280    .  290    .  300    .  310    .  320    .  330    .  340    .  350    .  360    .  370    .  380    .  390    .
# Score Template Links and tools%idFirst MRVILMTGKGGVGKTSVAAATGLRCAELGHKTLVLSTDPAHSLADSFDLELGHEPRLVKENLWGAELDALMELEGNWGAVKRYITQVLQARGLDGVQAEELAILPGMDEIFGLVRMKRHYDEADYDVLIIDSAPTGTALRLLSLPEVGGWYMRRFYKPLQGMSVALRPLVEPLFRPIAGFSLPDKEVMDAPYEFYEQIEALEKVLTDNTQTSVRLVTNPEKMVLKESLRAHAYLSLYNVSTDLVIANRILPETIDDPFFQRWKSNQQVYKQEIYDNFHPLPVKEAPLFSEEMCGLAALERLKDTLYKDEDPSQVYYKENTINIVQGSNNDYSLELYLPGIPKEQIQLNKTGDELNVRIGNHRRNLVLPQALAALSPAGAKMEDDYLKIRFAEAVKRLast
1 -93.7003igf_A mol:protein length:374 All4481 protein  ali model follow..  25  3.LILTFLGKSGVARTKIAIAAAKLLASQGKRVLLAGLA-EPVLPLLLEQTLTPDPQQIAPNLEVVQFQSSVLLERNWEEVKKLEAQYLRTPIIKEVYGQELVVLPGMDSALALNAIREYDASGKYDTIVYDGTGDAFTLRMLGLPESLSWYVRRFRQLFVNSTIAESPLIQPLISSFFNVNWTADNFAQPTNQVNNFLDKGKEALADPKRVAAFLVTTADPLEVVSVRYLWGSAQQIGLTIGGVIQVSSQTE------------------GDLSAEFTPLSVTVVPDVTKGDWQIDALPNFVEQAEQAPKPITI------------DTHNRQVRLFLPGFDKKQVKLTQYGPEVTVEAGDQRRNIFLPPALSGRPITGAKFQNNYLIISFLE.... 368
2 -79.1003ug6_A mol:protein length:349 arsenical pump-driving ATPase  ali model follow..  32  26TKYIMFGGKGGVGKTTMSAATGVYLAEKGLKVVIVSTDPAHSLRDIFEQEFGHEPTKVKDNLYVVEIDPQKAMEEYKEKLKAQIEENPFLGEMLEDQLEMAALSPGTDESAAFDVFLKYMDSNEFDVVIFDTAPTGHTLRFLGMPEVMDKYMTKLIKLRKQMSGFMKMMKKLLPFGGKDEDIDYDKMLEELEKMKERIVRARNILSDPERTAFRLVVIPEEMSILESERAMKALQKYGIPIDAVIVNQLIPEDVQCDFCRARRELQLKRLEMIKEKFGDKVIAYVPLLRTEAKGIETLKQIAKILYGEEEKEEQKIEQKVGQ.......................................................................... 349
3 -77.4003zq6_A mol:protein length:324 PUTATIVE ARSENICAL PUMP-DRIVING ATPASE  ali model follow..  33  15.TFVFIGGKGGVGKTTISAATALWMARSGKKTLVISTDPAHSLSDSLEREIGHTPTKITENLYAVEIDPEVAMEEYQAKLQEQAAMN-MGLDMLQDQMDMASMSPGIDEAAAFDQFLRYMTTDEYDIVIFDTAPTGHTLRLLSFPEIMDSWVGKMIKIRRQIGSMAKAFKNIL--PFMGDEEEEDRALQDMEATKKQINAAREVMSDPERTSFKMVVIPEEMSIYESERAMKALEKYSIHADGVIVNQVLPEESDCEFCNARRKLQQERLKQIREKFSDKVVAEVPLLKKEAKGIETLEKIAEQLYGEPEP..................................................................................... 323
4 -77.3003ibg_A mol:protein length:348 ATPase, subunit of the Get complex  ali model follow..  24  26LRWIFVGGKGGVGKTTTSCSLAIQLAKVRKSVLLISTDPAHNLSDAFGQKFGKEARLVDSNLSAMEIDPNGSIQDLLASGDSQGDDPLAGLGMGNMMQDLAFSIPGVDEAMSFAEVLKQVKSLSYEVIVFDTAPTGHTLRFLQFPTVLEKALAKLSQLSSQFGPMLNSILGARGGL--PGGQNIDELLQKMESLRETISEVNTQFKNPDMTTFVCVCIAEFLSLYETERMIQELTSYGIDTHAIVVNQLLFPKEGCEQCNARRKMQKKYLEQIEELYEDFNVVRMPLLVEEVRGKEKLEKFSEMLVHPYVPPQL.................................................................................. 341
5 -74.9003iqw_A mol:protein length:334 Tail-anchored protein targeting factor Get3  ali model follow..  25  16LRWIFVGGKGGVGKTTTSCSLAIQLAKVRRSVLLLSTDPAHNLSDAFSQKFGKEARLVEDNLYAMEIDPNGSMQDLLAGQTGDGDAGMGGVG---VMQDLAYAIPGIDEAMSFAEVLKQVNSLSYETIVFDTAPTGHTLRFLQFPTVLEKALAKVSQLSGQYGSLLNGILGGSGTL--PNGQTLSDVMEKLDSLRVTISEVNAQFKDERLTTFVCVCIPEFLSLYETERMIQELANYGIDTHCIVVNQLLFPKSDCEQCTARRRMQKKYLDQIEELYEEFNVVKMPLLVEEVRGKERLEKFSEMLIKPFVPPE................................................................................... 328
6 -71.0005bw8_A mol:protein length:373 ATPase GET3  ali model follow..  24  31HKWIFVGGKGGVGKTTSSCSIAIQMAQPNKQFLLISTDPAHNLSDAFGEKFGKDARKVTNNLSCMEIDPSAALKDMNDMAVSRANNNGSDGQGDDLGADLTGSIPGIDEALSFMEVMKHIKRETFDTVIFDTAPTGHTLRFLQLPNTLSKLLEKFGEITNKLGPMLNSFMG----------AGNVDISGKLNELKANVETIRQQFTDPDLTTFVCVCISEFLSLYETERLIQELISYDMDVNSIIVNQLLFAENDQKRCQARWKMQKKYLDQIDELYEDFHVVKMPLCAGEIRGLNNLTKFSQFLNKEYNPITDGKVIYELEDKE....................................................................... 367
7 -70.3003idq_A mol:protein length:369 ATPase GET3  ali model follow..  24  18HKWIFVGGKGGVGKTTSSCSIAIQMAQPNKQFLLISTDPAHNLSDAFGEKFGKDARKVTNNLSCMEIDPSAALKDMNDMAVSRANNNGSDGQGDDLGADLTGSIPGIDEALSFMEVMKHIKRETFDTVIFDTAPTGHTLRFLQLPNTLSKLLEKFGEITNKLGPMLNSFMG----------AGNVDISGKLNELKANVETIRQQFTDPDLTTFVCVCISEFLSLYETERLIQELISYDMDVNSIIVNQLLFAENDQKRCQARWKMQKKYLDQIDELYEDFHVVKMPLCAGEIRGLNNLTKFSQFLNKEYNPITDGKVIYELE.......................................................................... 351
8 -70.0003a36_A mol:protein length:362 ATPase GET3  ali model follow..  25  18HKWIFVGGKGGVGKTTSSCSIAIQMAQPNKQFLLISTDPAHNLSDAFGEKFGKDARKVTNNLSCMEIDPSAALKDMNDMAVSRANNNGSDGQGDDLGADLTGSIPGIDEALSFMEVMKHIKRQEFDTVIFDTAPTGHTLRFLQLPNTLSKLLEKFGEITNKLGPMLNSFMG----------AGNVDISGKLNELKANVETIRQQFTDPDLTTFVCVCISEFLSLYETERLIQELISYDMDVNSIIVNQLLFAENDQKRCQARWKMQKKYLDQIDELYEDFHVVKMPLCAGEIRGLNNLTKFSQFLNKEYNPIT................................................................................... 342
9 -69.7002woo_A mol:protein length:329 ATPASE GET3  ali model follow..  23  19LKWIFVGGKGGVGKTTTSCSLAIQMSKVRSSVLLISTDPAHNLSDAFGTKFGKDARKVPDNLSAMEIDPNLSIQEMTEQADQQNPN----NPLSGMMQDLAFTIPGIDEALAFAEILKQIKSMEFDCVIFDTAPTGHTLRFLNFPTVLEKALGKLGGLSSRFGPMINQM-----GSIMGVNANEQDLFGKMESMRANISEVNKQFKNPDLTTFVCVCISEFLSLYETERMIQELTSYEIDTHNIVVNQLLLDNTTCPQCMARRKMQQKYLAQIEELYEDFHVVKVPQVPAEVRGTEALKSFSEMLVKPYVYPT................................................................................... 325
10 -68.7003io3_A mol:protein length:348 DEHA2D07832p  ali model follow..  22  18LKWIFVGGKGGVGKTTTSSSVAVQLAQPNEQFLLISTDPAHNLSDAFCQKFGKDARKVEPNLSCMEIDPEAAMSDLQQQASQYNNDPND--PLKSMMSDMTGSIPGIDEALSFMEVLKHIKNISYKTIIFDTAPTGHTLRFLQLPSTLEKLLSKFKDLSGKLGPMLSMMGG----------GQQQDIFEKLNEVQKNVSEVNEQFTNPELTTFICVCISEFLSLYETERMIQELMSYNMDVNSIVVNQLLFAEGDDKRCESRWKMQKKYLDQMGELYEDYHLVKMPLLGCEIRGVENLKKFSKFLLKPYDPKADSDIVFDLE.......................................................................... 346
11 -47.7001f48_A mol:protein length:589 ARSENITE-TRANSLOCATING ATPASE  ali model follow..  25  327HGLIMLMGKGGVGKTTMAAAIAVRLADMGFDVHLTTSDPAAHLSMTLNGSL--------NNLQVSRIDPHEETERYRQHVLETKGKELDEAGKRLL--EEDLRSPCTEEIAVFQAFSRVIREAGKRFVVMDTAPTGHTLLLLDATGAYHREIAKKMGEKGH------------------------------------FTTPMMLLQDPERTKVLLVTLPETTPVLEAANLQADLERAGIHPWGWIINNSLSIDTRSPLLRMRAQQELPQIESVKRQHAS-RVALVPVLASEPTGIDKLKQLAG............................................................................................. 583
12 -19.1003kje_A mol:protein length:254 CO dehydrogenase/acetyl-CoA synthase complex,  ali model follow..  15  1MKLAV-AGKGGVGKTTVAAGLIKIMASDYDKIYAVDGDPDSCLGQTLGLSI-EEAYAITPLIEMKDEIREKTGDGGLLILNPKVDGDLDKYGRYIDDKIFLIRMGEIKKGSFLGSVVSALFLDKKEAVVMDMG--------------------------------------------AGIEHLTRGTAKAVD-------------------MMIAVIEPNLNSIKTGLNIEKLAGDLGIKKVRYVINKVRNIKEEKLIKKHLPEDKILGIIPYNELFIELSLKGEEIWQSTNPAFVNLHDIYQKL........................................................................................... 249
13 -18.3003pg5_A mol:protein length:361 Uncharacterized protein  ali model follow..  15  1MRTIFFNNKGGVGKTTLSTNVAHYFALQGKRVLYVDCDPQCNATQLMEEQTESIYLDGLNDEVAERNSLAKTVYAIFVPLREGESQIAAEITPMRSERFGVDVLPGHPALSQIEDAHAMERDDRYDVIFFDVGPSLGPFNRTVLPTATDLFFGNLARWFDAWVTQYAEIHE................................................................................................................................................................................................................................. 212
14 -16.8004ru8_A mol:protein length:314 Uncharacterized protein  ali model follow..  14  3.KVITIHNKGGVGKTTTTAIIAMGLGAMGKRVLLIDFDAQMSLTQIFVRE--EDRLKILESSHDVTQD-----KSAFALLRTMEPARIKFFHEGKGVKFGIDVIPGIQSEWNILRMLDLYRD-QYDYILIDTAPS--IKPILRASHYLLIPEDGTPEAFTAMRIFLNEALPKYILPRPEGGFYKYPRILGVRNSTAILMKHNKILEE----ELSNSELKDHVIYPPYFGADKDNPEDYILSSRKDEKRAPISEVFDKLFLVDDKVQKDLYAFFSKVFTEIPKEVVRRVEND......................................................................................................... 313
15 -16.7003k9g_A mol:protein length:267 PF-32 protein  ali model follow..  11  22.KIITIASKGGVGKSTSAIILATLLSK-NNKVLLIDMDTQASITSYFYEKIEKLGINFTKFNIYEILKENVDIDSTIINVDNNLDLIPSYLTLHNFSEDKIEH----KDFLLKTSLGTL--YYKYDYIVIDTNPSLDVTLKVIIPMTAEKWAVESLDLFNFFVRKLNLFLPIFLIITRFKKNRTHKTLFEILKTKDRF----GTISEREDLNRRIAENNNFDLNKDYIKEYENILE--------FLKKI................................................................................................................................................... 261
16 -15.8001wcv_1 mol:protein length:257 SEGREGATION PROTEIN  ali model follow..  16  9..IALANQKGGVGKTTTAINLAAYLARLGKRVLLVDLDPQGNATSGLGVRAERGVYHLLQGEPLEGL-------------------VHPVDGFHLLPATPDLVGATVELAGAPTALREALRDEGYDLVLLDAPPSLSPLTLVVVPVQAEYYVAGLLATLEEVRAGLNPRLRLLGILVTMYDGRTLLAQQVEAQLRAHFGE-----------KVFWTVIPRNVRLAEAPSFGKTIAQHAPTSPGAHAYRRLAEE............................................................................................................................................... 241
17 -15.7003vx3_A mol:protein length:248 ATPase involved in chromosome partitioning, P  ali model follow..  21  22..IPVVSGKGGVGKSLVSTTLALVLAEKGYRVGLLDLD-GASDHVILGFEPKEFPEE--------------------RGVVPPTVHGIKFMTIAYYTEDRPTPLRGKEISDALIELLTITRWDELDYLVIDMPPGLGDQLL-------------------------------------------------------------DVLRFLKRGEFLVVATPSKLSLNVVRKLIELLKEEGHKVIGVVEN..................................................................................................................................................... 187
18 -15.4001g3q_A mol:protein length:237 CELL DIVISION INHIBITOR  ali model follow..  18  5..ISIVSGKGGTGKTTVTANLSVALGDRGRKVLAVDGD-----------------------LTMANLSLVLGVDDPDVTLHDVLAGEANEDAIYMTQFDNVYVLPGAVDWEHVRKLPEVIKSDKFDFILIDCPAGLQLDAMSAMLSG---------------------------------------------------------------EEALLVTNPEISCLTDTMKVGIVLKKAGLAILGFVLNRYGRSDRDIPPEAAEDVMEVPLLAVIPEDPAIREGTLAVKYKPESKGAKAFVKLAEEIEKLA....................................................................................... 237
19 -15.1002oze_A mol:protein length:298 Orf delta`  ali model follow..  15  39..ILNNYFKGGVGKSKLSTMFAYLTDKLNLKVLMIDKDLQATLTKDLAKTFKVELPRVNFYEGLKNGNLASSIVH---------------------LTDNLDLIPGTFDLMLLPKLTRSWTKSDYDLIIIDTVPT--TNNAIVASDYV---IQNYISYLIDLQEQFNPGLDMIGFVPYLVDTDSATIKSNLEELYKQHKEDNLVFQNIIKRSNKVSTWSKNGITEHKGYDKKVLSMYKNVFFEML....................................................................................................................................................... 287
20 -14.9004pfs_A mol:protein length:273 Cobyrinic Acid a,c-diamide synthase  ali model follow..  19  7..LAVANQKGGVAKTTTVASIGAALTEQGRRVLLVDLDPQGCLTFSLGH----DPDKLPVSVHEVLLGDVEPSA----ALVRTDEGMTLLPANIDLAGAEAMLLMRAGREYALKRALAKLDG-DFDVVIIDCPPSLGVLTLVIVPLQCETLVGQFLRTISDVQQITNPDLKLLGALPTLYDSRTTHSRDVLLDVADRYEL-----------PVLAPPIPRTVRFAEA......................................................................................................................................................................... 223
21 -14.2001ion_A mol:protein length:243 PROBABLE CELL DIVISION INHIBITOR MIND  ali model follow..  22  5..ISIVSGKGGTGKTTVTANLSVALGEMGRKVLAVDGD-----------------------LTMANLSLVLGVDDVNITLHDVLAGDAKEDAIYMTQFENVYILPGAVDWEHVIKLPEVIKSGKYDFILIDCPAGLQLRAMSAMLSG---------------------------------------------------------------EEAILVTNPEISCLTDTMKVGMVLKKAGLAILGFILNRY................................................................................................................................................... 173
22 -14.1002xj4_A mol:protein length:286 MIPZ  ali model follow..  13  5.RVIVVGNKGGAGKSTIAVHLVTALLYGGAKVAVIDLDLRQRTSARFFE------------------NRRAWLDNKKIELPEPLALNLSDNDVALAERPEEEQVAGFEAAFA---------MAECDFILIDTPGGDSAITLVVTPMNDSFVFDMLGTVDPVTLELTKPSLYSLTVWEGRKQRALSGQRQAMDWVVLRNRLATTEARNRKRLEDRLNALAKRVGFRIGPGLRDRVIYRELFPFGLTIADLSPQVRPVPVSLQHLAARQELRALMHS......................................................................................................................... 263
23 -13.9003cwq_A mol:protein length:209 ParA family chromosome partitioning protein  ali model follow..  12  1MIITVASFKGGVGKTTTAVHLSAYLALQG-ETLLIDGDPNRSATGPFKVVDERQAAKYAPKYQNIVIDTQARPEDEDLE--------------ALADGCDLLVIPSTPDALALDALMLTIETLQ--RILLTIIPPYPSKDGDEARQLLTTA----LPLFKRGIKRYSAFQKASLNGVVVSEVSDSKAGIAWSDYKATGKEIVEEILTLE........................................................................................................................................................................................... 203
24 -13.8001hyq_A mol:protein length:263 CELL DIVISION INHIBITOR (MIND-1)  ali model follow..  22  5..ITVASGKGGTGKTTITANLGVALAQLGHDVTIVDAD-----------------------ITMANLELILGMEGLPVTLQNVLAGEARIDEAIYVGPGGVKVVPAGVSLEGLRKANP---MESTDILLLDAPAGLE------------------------------------------------------RSAVIAIAAAQELL---------LVVNPEISSITDGLKTKIVAERLGTKVLGVVVNRI................................................................................................................................................... 172
25 -13.7002xit_A mol:protein length:294 MIPZ  ali model follow..  13  5.RVIVVGNKGGAGKSTIAVHLVTALLYGGAKVAVIDLDLRQRTSARFFE------------------NRRAWLDNKKIELPEPLALNLSDNDVALAERPEEEQVAGFEAAFA---------MAECDFILIDTPGGDSAITLVVTPMNDSFVFDMLGTVDPVTLELTKPSLYSLTVWEGRKQRALSGQRQAMDWVVLRNRLATTEARNRKRLEDRLNALAKRVGFRIGPGLRDRVIYRELFPFGLTIADLSPQVRPVPVSLQHLAARQELRALMHS......................................................................................................................... 263
26 -13.2004dzz_A mol:protein length:206 Plasmid partitioning protein ParF  ali model follow..  15  1MKVISFLNKGGSGKTTAVINIATALSRSGYNIAVVDTDPQMSLTN---SKAGKAAFDVFTAASEKDVYGIRKDLADYDFAIVDGAGSLSVITSAAVMVSDLVIIPAAGSVVTVLEAQAYSRKVEARFLITRKIEMATMLN-----VLKESIKDTGVKAFRTAITQRQVYVKSILDGDSVFESSDGAAKGEIEILTKEIVRI................................................................................................................................................................................................... 204
27 -12.9003ez9_A mol:protein length:403 ParA  ali model follow..  16  114..IFVVNLKGGVSKTVSTVTLAHALRRHDLRILVIDLDPQASSTMFLDHTLETAAQAMLNNLDAETLRKEVIRPTIVPGVDVIPASIDDGFVASQWRELVEEHLPGQNQYEILRRNIIDRVADDYDFIFIDTGPHLDPFLLNGLPAQVDFH------STLKYLTRLPEMLEQLEEEGVEPRLSASIGFMSKMTGKRDHETSHSLAREVYASNILDSSLPRLDGFERCGESFDTVISAN.............................................................................................................................................................. 366
28 -12.9003ez2_A mol:protein length:398 Plasmid partition protein A  ali model follow..  13  109.YVIFISNKGGVSKTVSTVSLAHAMRAEDLRILVIDLDPQSSATMFLSHKHSIGIVNATSAQAMLQNVSR----------EELLEEFIVPSVVPGVD-----VMPASIDDAFIASDWRELCNSDYDFILVDSGPHLDAFLKNALPATVDFHSS-------KYVARLPELVKLISDEGCECQLATNIGFMSKLSNKADHKYCHSLAKEVFGGDMLDVFLPRLDGFERCGESFDTVISAN.............................................................................................................................................................. 363
29 -12.8003ez7_A mol:protein length:398 Plasmid partition protein A  ali model follow..  13  109.YVIFISNKGGVSQTTSTVSLAHAMRAEDLRILVIDLDPQSSATMFLSHKHSIGIVNATSAQAMLQNVSR----------EELLEEFIVPSVVPGVD-----VMPASIDDAFIASDWRELCNSDYDFILVDSGPHLDAFLKNALPATVDFH------SSLKYVARLPELVKLISDEGCECQLATNIGFMSKLSNKADHKYCHSLAKEVFGGDMLDVFLPRLDGFERCGESFDTVISAN.............................................................................................................................................................. 363
30 -12.8003kb1_A mol:protein length:262 Nucleotide-binding protein  ali model follow..  21  21..IAVMSGKGGVGKSTVTALLAVHYAKQGKKVGILDAD-GPSIPHLFGLE-KGKVAVSDEGLEPVLTQRLGIKVMSIQFLLP--------------KRETPVIWRGPLIAGMIREFLGRVAWGELDYLLIDLPPGTGDAPL-------------------------------------------------------------TVMQDAKPNGAVIVSTPQELTAAVVEKAITMAEQTKTAVLGIVEN..................................................................................................................................................... 190
31 -12.7002ph1_A mol:protein length:262 Nucleotide-binding protein  ali model follow..  22  21..IAVMSGKGGVGKSTVTALLAVHYARQGKKVGILDAD-GPSIPILFGLR-NARIAVSAEGLEPVLTQKYGIKVMSMQFLLP--------------KENTPVIWRGPLIAGMIREFLGRVAWGELDHLLIDLPPGTGDAPL-------------------------------------------------------------TVMQDAKPTGVVVVSTPQELTAVIVEKAINMAEETNTSVLGLVEN..................................................................................................................................................... 190
32 -12.6003fkq_A mol:protein length:373 NtrC-like two-domain protein  ali model follow..  20  140..VIFTSPCGGVGTSTVAAACAIAHANMGKKVFYLNIEQCGTTDVFFQAEGNATMSDVIYSLKSRKANLLLKLESCIKQ--SYFSSTKVALDILEISYADIDTL-----------IGNIQGMDNYDEIIVDLPFEIEKLKLLSKAWRIIVVNDGSQLSNYKFMRAYESV................................................................................................................................................................................................................................... 300
33 -12.3003fwy_A mol:protein length:314 Light-independent protochlorophyllide reducta  ali model follow..  14  34AKVFAVYGKGGIGKSTTSSNLSAAFSILGKRVLQIGCDPKHDSTFTL--------------TGSLVPTVIDVLKDVDFHPEELRPEDFVFEGFNGVMCVEAG--AGTG-GQTVKLLKQHHLLDDTDVVIFDVLGDADQAVVVTANDFDSIYAM------NRIIAAVQAKSKNYKVRLAGCVANRSRATDEVDRFCKETNF-LDAIRRSRLKKKTLFEMDEDQDVLAARAEYIRLAESLWRGLDPIDPHSLPDRDIFELLG........................................................................................................................................ 298
34 -12.3004fei_A mol:protein length:102 Heat shock protein-related protein  ali model follow..  23  12....................................................................................................................................................................................................................................................................................................................................RDAGTHLDLLLDVPGVDAGTLALAEDGGQLTVSSGRFVRELAFPEPVRPASGV-ASLAGGVLTVRFEKLRPT 97
35 -12.2001de0_A mol:protein length:289 NITROGENASE IRON PROTEIN  ali model follow..  19  2MRQCAIYGKGGIGKSTTTQNLVAALAEMGKKVMIVGCDPKADSTRLI--------------LHSKAQNTIMEMAAEAGTVEDLELEDVLKAGYGGVKCVESG--PGVG-ITAINFLEEEAYEDDLDFVFYDV--LGDVV--WAMP-----------------------------------------------------------IRENKAQEIYIVCSGEMMAMYAANNISKGIVKYSVRLGGLICNS------------RNTDREDELIIALANKLGTQMIHFVP.............................................................................................................. 212
36 -12.1004v02_A mol:protein length:258 SITE-DETERMINING PROTEIN  ali model follow..  21  5..IVITSGKGGVGKTTLTANIGTALAKLGKKVLLIDAA------------IGLRNLDMILGLENRIVYDILDVLEGRVPYEKALVKDKRGLSLWLLPANQRANKDVIDIEKWNKTVEEIKNSGNYDYILVDS------------PAGIEKGFQIAVSPADKA---------------------------------------------------LIVVNPEVSSIRDADRVIGLLESMDKRNYKVIVNRIKWE-----------MVKRGAMLSVEDIVDILKAEIIGIIPEE......................................................................................................... 207
37 -12.1003cio_A mol:protein length:299 Tyrosine-protein kinase etk  ali model follow..  17  95.NILMITGATDSGKTFVSSTLAAVIAQSDQKVLFIDADNEHGLSEYLAGKDELNKVIQHFGKGGFDVITRGQVP------------------------------PNPSELLMRDRMRQLLENDHYDLVIVDTPP------MLAVSD--------------------------------------------------------AAVVGRSVGTSLLVARFGLNTAKEVSLSMQRLEQAGVNIKGAILNGVIKRAST............................................................................................................................................. 272
38 -12.1004rzk_A mol:protein length:90 Small heat shock protein hsp20 family  ali model follow..  17  15.....................................................................................................................................................................................................................................................................................................................................EKGDEIKVVAEVPGVNKEDIKVKVTNGGKKLVIRQYYKEIDLPAEVDEKAAK-ANFKNGVLEITLKKKAS. 89
39 -12.0001cp2_A mol:protein length:269 NITROGENASE IRON PROTEIN  ali model follow..  17  1MRQVAIYGKGGIGKSTTTQNLTSGLHAMGKTIMVVGCDPKADSTRLLLGGLAQKSVLDTLREEGEDVELDSILKEGYGGIR-----------VESGGPEPGVGCAGRGIITSINMLEQLAYTDDLDYVFYDV--LGDVV--FAMP-----------------------------------------------------------IREGKAQEIYIVASGEMMALYAANNISKGIQKYGVRLGGIICNS------------RKVANEYELLDAFAKELGSQLIHFVP.............................................................................................................. 209
40 -11.9003la6_A mol:protein length:286 Tyrosine-protein kinase wzc  ali model follow..  16  87.NVLMMTGVSSIGMTFVCANLAAVISQTNKRVLLIDCDNVNGLSEILIGQGDITTAAKPTSIAKFDLIPRGQVP------------------------------PNPSELLMSERFAELVNSKNYDLVLIDTPP------ILAVTD--------------------------------------------------------AAIVGRHVGTTLMVARYAVNTLKEVETSLSRFEQNGIPVKGVILNSIFRRASA............................................................................................................................................. 264
41 -11.9002ynm_A mol:protein length:301 LIGHT-INDEPENDENT PROTOCHLOROPHYLLIDE REDUCTA  ali model follow..  14  34ALVIAVYGKGGIGKSTTSSNLSAAFSKLGKKVLQIGCDPKHD-----------STFTLTHKMVPTVIDILEEVDFHSEELR--PQDFMFEGFNGVQCVESGGPPAGTG-GQTVKLLKEHHLLEDTDVVIFDVLGDANYCLIVTANDFDSIFAM------NRIVAAINAKAKNYKVRLGGVIANRSAELDQIEKFNEKFRNVDAIRRSRLKKCTIFEMDPEEEGVLEVQNEYLSLAKKMIDNVEPLEAEPLKDREIFDLLG........................................................................................................................................ 299
42 -11.6004jmp_A mol:protein length:269 C-terminal fragment of CapA, Protein tyrosine  ali model follow..  18  74VQSIVITSEAGAGKSTIAANLAVAYAQAGYKTLIVDGDRKPTQHYIFNLPNNEGLSSLLLN-------------------WSTYQDSIISTEIEDLDVLTSGPIPNPSELITSRAFANLYDTMNYNFVIIDTPPV--------------------------------------------------------------NTVTDAQLFSKFTGNVVYVVNSENNNKDEVKKGKELIEATGAKLLGVVLNRMPKDKSASYYA......................................................................................................................................... 256
43 -11.5004rz2_A mol:protein length:295 Site-determining protein  ali model follow..  21  27..IAVTSGKGGVGKSNVSLNFSLSLSKLGFRVLLLDMDIGMGNIDIL---LGESSSLALADW----FSARLPLSELVKSGPEHLSYIAGGTGA-----AQWQGLDTASIDRFLTELQAV--ASQYDYLIFDMGASGERLYFLKSVD-----------------------------------------------------------------DVFVVTTPEPTAMTDAYAMMKYMHAAGSEAPSVIVNRAGKEREGYEVFER--------LKHVTGRFLNKDIALLGIIPEDRTVARAVVS................................................................................................ 240
44 -11.5001shs_A mol:protein length:147 SMALL HEAT SHOCK PROTEIN  ali model follow..  27  48....................................................................................................................................................................................................................................................................................................................................IEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAEEIYRTIKLPATVKEENAS-AKFENGVLSVILPKAESS 139
45 -11.5002ved_A mol:protein length:271 MEMBRANE PROTEIN CAPA1, PROTEIN TYROSINE KINA  ali model follow..  18  76VQSIVITSEAGAGMSTIAANLAVAYAQAGYKTLIVDGDRKPTQHYIFNLPNNEGLSSLLLN-------------------WSTYQDSIISTEIEDLDVLTSGPIPNPSELITSRAFANLYDTMNYNFVIIDTPPV--------------------------------------------------------------NTVTDAQLFSKFTGNVVYVVNSENNNKDEVKKGKELIEATGAKLLGVVLNRMPKDKSASYYA......................................................................................................................................... 258
46 -11.5004jlv_A mol:protein length:269 C-terminal fragment of Membrane protein CapA1  ali model follow..  19  76VKRLLVTSEKGAGKSTVVSNVAITYAQAGYKTLVIDGDRKPTQNYIFNEQNNNGLSSLIIG-------------------RTTMSEAITSTEIENLDLLTAGPVPNPSELIGSERFKELVDLKRYDIIIVDTPPV--------------------------------------------------------------NTVTDAQLYARAIKDSLLVIDNEKNDKNEVKKAKALMEKAGSNILGVILNKTKVDKSSSYYH......................................................................................................................................... 258
47 -11.3004eld_A mol:protein length:161 Small heat shock protein HSP16.5  ali model follow..  27  62....................................................................................................................................................................................................................................................................................................................................IEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAEEIYRTIKLPATVKEENAS-AKFENGVLSVILPKAESS 153
48 -11.0004ylb_A mol:protein length:128 Heat shock protein Hsp20  ali model follow..  18  36.....................................................................................................................................................................................................................................................................................................................................EEGGELVVVADLAGFNKDKISVRLSAQNELIRPLKIHKVIRLPVKVKRDSQVTDKYENGVLTIRIPVEGSV 123
49 -11.0003gt6_A mol:protein length:103 Low molecular weight heat shock protein  ali model follow..  26  13....................................................................................................................................................................................................................................................................................................................................KEEVNHFVLYADLPGIDPSQIEVQMDKGILSIRYGSFHRRFALPDSADADGIT-AAGRNGVLEIRIPKRPA. 102
50 -11.0003aab_A mol:protein length:123 Putative uncharacterized protein ST1653  ali model follow..  23  31.....................................................................................................................................................................................................................................................................................................................................EEGGYLVVVADLAGFNKEKIKARVSGQNELIRPKYVRKVIRLPYNVAKDAEISGKYENGVLTIRIPIAGTS 118
51 -10.9003vqk_A mol:protein length:123 Small heat shock protein StHsp14.0  ali model follow..  23  31.....................................................................................................................................................................................................................................................................................................................................EEGGYLVVVADLAGFNKEKIKARVSGQNELIRPKYVRKVIRLPYNVAKDAEISGKYENGVLTIRIPIAGTS 118
52 -10.7003q9l_A mol:protein length:260 Septum site-determining protein minD  ali model follow..  19  5..IVVTSGKGGVGKTTSSAAIATGLAQKGKKTVVIDFAIG------LDLIMGCERRVVYDFVNVIQGDAT-----------------LNQALIKDKRTENLYILPASQT--GVAKVLDDLKAMDFEFIVCDSPA-ADEAIITTNPEVSS----------RDSDRILGILASKSRRAENGEEPIKEHLL--LTRYNPGRVSRGDMLSMEDVLEILRIVIPEDQSVLRASN....................................................................................................................................................................... 222
53 -10.4003ea0_A mol:protein length:245 ATPase, ParA family  ali model follow..  14  7..FGFVSAKGGDGGSCIAANFAFALSQEPIHVLAVDISLPFGDLDMY-LSGNTHSQDLADISNASDRLDKSLLDTMVQHISPSLDLIPSPATFEKIVNIEPERVSDLIHIA----------ASFYDYIIVDFGASIDHVGVWVLEHL---------------------------------------------------------------DELCIVTTPSLQSLRRAGQLLKLCKEFEKPISRIILNRA-------------DTNSRITSDEIEKVIGRPISKRIP.............................................................................................................. 206
54 -10.4003w1z_A mol:protein length:143 Heat shock protein 16  ali model follow..  20  42....................................................................................................................................................................................................................................................................................................................................HEGKDTVSVDVELPGVKKEDVQVHYDSGKLTISFGSFSRTITIPAKIDADRIE-ANFSNGLLTVTLPKVEKS 134
55 -10.3004yds_A mol:protein length:228 Flagella-related protein H  ali model follow..  13  21.ASIMIEGDHGTGKSVLSAQFVLGFLLSDKKGYVITTEQTTKLIKMKEIKIDLIPYFIRGKLRIAPLNTKKFNWNS------------------------------SLAEKILDVIVNFIRSKNIDFIVIDS----SILAAFSKEKQLLQFMKDIRVLVNTGKMIL---------FTIHPDTFDEEMKSKITSIVDVYLKLSAATIGGRRVKILERVKTTGGISGSDTISFDVDPALGIKVVPLSLSR.................................................................................................................................................... 227
56 -10.1004wia_A mol:protein length:233 Putative flagella-related protein H  ali model follow..  28.SLIIIEGEESTGKSVLCQRLAYGFLQNRYSVTYVSTQLTTLIKQMNSLNYSINKKLLSGALLYIPVYPLIADNKKKDGFLKKVMETRAFYEKDVIIFDSISALASEVNVDDLMAFFKRITALKKIIICTVNPKELPESVLTIIRTSATMLIRELFTFGGDLKNLAK..................................................................................................................................................................................................................................... 200
57 -9.6402w0m_A mol:protein length:235 SSO2452  ali model follow..  12  24.FFIALTGEPGTGKTIFSLHFIAKGLRDGDPCIYVTTE--------------ESRDSIIRQAKQFNWDFEEYIEKKLIIIDALMKEKEDQWSLVNLTPEEL-----------VNKVIEAKQKLGYARLVIDS-----SALFLDKPAMARKISYYLKRVLNKWNFTIYATSQYAITTSQAFGFGVEHVADGI--------RFRRMIRNGELHRYILIEKMRQTDHDKHVWEIDIVNGKGIVLKGRLEE..................................................................................................................................................... 235
58 -9.4801rz3_A mol:protein length:201 hypothetical protein RBSTP0775  ali model follow..  12  24..VLGIDGLSRSGKTTLANQLSQTLREQGISVCVFHMDDHIV-----RAKRYHTGNEEWFEYYYLQWDVEWLTHQLFRQLKASHQLTLPFYDHETDTHSKRTVYLSDSDMIMIEGVFLQRKEPFFDFVVYDCPREIRFAREND-KQNIQKFINRYWKAEDYYLETEEP.................................................................................................................................................................................................................................... 189
59 -9.4101nks_A mol:protein length:194 ADENYLATE KINASE  ali model follow..  10  1MKIGIVTGIPGVGKSTVLAKVKEILDNQGINNKII------NYGDFMLATA--LKLGYAKDRDEMRKLSVEKQKKLQIDAAKGIAEEARAGGEGYLFIDTHAVIRTPSGYLPGLPSYVITEINPSVIFLLEADPKIILSRQKR-DYSDESVILETINFARYAATASAVLAGSTVKVIVNVEGDPSIAANEIIRSMK........................................................................................................................................................................................................ 194
60 -9.2503adb_A mol:protein length:259 L-seryl-tRNA(Sec) kinase  ali model follow..  5VMLIILTGLPGVGKSTFSKNLAKILSKNNIDVIVLGSDLIRESFPVWKEKYEEFIKKSTYRLIDSALKNYWVIVDDTNYYNSMRRDLINIAKKYNKNYAIIYLKASLDVLIR----RNIERGEKIPNEVIK-----KMYEKFDEPGKKYKWDEPFLIIDTTKDIDFNEIAKKLIEKSKEIPKNKNKNNNISDKIDKETRKIVSEYIKSKKLDKDKIKEVVELRKEFLKKIKKMEEVDADRVLKEFKDLL................................................................................................................................................... 250
61 -9.2302kjq_A mol:protein length:149 DnaA-related protein  ali model follow..  13  31.QFIYVWGEEGAGKSHLLQAWVAQALEAGKNAAYIDAASMPLTDAAFEAEY--------------------------------------------LAVDQVEKLGNEEQALLFSIFNRFRNSGKGFLLLGSEYTPQQLVIREDLRTRMAYCL.................................................................................................................................................................................................................................................... 137

FFAS is supported by the NIH grant R01-GM087218-01
1 2 4 1 8 9   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Sasin JM, Godzik A, Bujnicki JM. SURF'S UP! - protein classification by surface comparisons. J Biosci. 2007 Jan;32(1):97-100.