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Query: gi|16128010|ref|NP_414557.1| IS186 transposase (insL b0016 exp) [Escherichia coli str. K-12 substr. MG1655], from E.coli

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MNYSHDNWSAILAHIGKPEELDTSARNAGALTRRREIRDAATLLRLGLAYGPGGMSLREVTAWAQLHDVATLSDVALLKRLRNAADWFGILAAQTLAVRAAVTGCTSGKRLRLVDGTAISAPGGGSAEWRLHMGYDPHTCQFTDFELTDSRDAERLDRFAQTADEIRIADRGFGSRPECIRSLAFGEADYIVRVHWRGLRWLTAEGMRFDMMGFLRGLDCGKNGETTVMIGNSGNKKAGAPFPARLIAVSLPPEKALISKTRLLSENRRKGRVVQAETLEAAGHVLLLTSLPEDEYSAEQVADCYRLRWQIELAFKRLKSLLHLDALRAKEPELAKAWIFANLLAAFLIDDIIQPSLDFPPRSAGSEKKNLast
1 -64.000[L] COG3385 FOG: Transposase and inactivated derivatives  ali follow..  16  1MRFTPSIFAQLL-KAIDRRSFQAIVDRHAGDAYDKCFTSWDHLVALIYAQLSATTSLRGLEASFNANGSGRLMRSTLSDANRRRPVAVFAETFALLAGQLDRQTRREGTKMLRLIDSTPIP-NGRIRGMKLHVVYDPKADCPGILDITDANVNDAGRTITIEKGATYVFDKGYCHYGWW-TAIAEAGASFVTRPKTNMGLALVAE----------------------------------RPVEQPQGDGFLVLEDSQVSLASKGDSKLPIGLRRVIVKRQDGDTITLLTN--DLERSAVEIGQLYKDRWQIELLFRWIKQHLKIRKFLGNNDNAIRLQIFAAMIAYALLRIAARLAR............. 337
2 -25.300[L] COG5421 Transposase  ali follow..  11  25..........LIVGVFRELEVDNLIDEKLPKERDHTVPHSVCILAMLLNGLGFVGQRLYLFPDFFKNTREDLNQYVIGETLDRIVKYGPTKLFTEIALHIMTHLPIP--HCLHADTTSVSVYGDYDDEETIPLFMNTHSGNSSDKNTILEAIQSLKSVLRPESEVYYVADSSFYTDNN-IKNMGKSFWISRVMKEKKEQTLRTKLEKEVEKAEKSFKKLKGEDFFCEEDALKAAEKWIQDFPSVSFEKVDVKSIKKRELGKRGRPSKDKVNDAFVLNEMDKMGLFILASN--DINLSPEDMLKYYKGQDNVEKGFRFLKSTFSISKVYLKNKKRIEAMTMIMVLCLMIYSIAEWKLRTKLEEEN...... 478
3 -20.300[L] COG5558 Transposase  ali follow..  10  46VKERLRKLPEYVREAISV------ITVQKRVGRPKKVDLEKRVMLFLFAR--SNRDIEELLELFEPLFGIKVSYKTIERLYSDEEVRMALHNLFILLLREEGVSG-----DFSGDGTGYSLTRKGKDFRYVFRIIDIDTGMYVGFGYSDRSEKDAFEKALGMLKSMISLDKYYSS-RKTLRLFDAETAVYVIPKRNLARI---------------------------------------------------------------------------------------LRVIERIVEAPYRFLKRYFKRNLSEAGFSADKRRFG-WLIRQRREDRREMALFAVGLWHNVFAVRVVR............... 322
4 -18.300[L] COG5433 Transposase  ali follow..  2...ELKKLMEHISIIPDYRQ-----------AWKVEHKLSDILLLTICAVISGAEGWEDIEDFGETHLDAIPVHDTIARVVSCISPAKFHECFINWMRDCHSSD---DKDVIAIDGKTLRHSSRRRGAIHVISAFSTMHSLVIGQIKTDEKSNEITAPPELIKGKIITTD-AMGCQKDIAEKIQKQGGDYLFAVKGNQGRLNKA-------FEEKFPLKELNNPEHDSYAISEKSHGREEIRLHIVCEVPDELIDFTFEWKGLKKLCVAVSFRSIIAEQKKEPKMTVRYYISSADLTAGKFATAIRNHWHVEVVMNE-------DDCKIRRGNAAELFSGIRHIAINILTNDKVFKAGLRRKMRKAAMDR 365
5 -14.900[L] COG5659 FOG: Transposase  ali follow..  14  1MYGECMSASDRFAEYMNY---------AEGLGHDRRAGLESYCTGLMLP--LSRKSVEPMAARVDPLHASA-RHQSL-HHFVSKSDWSDTALLSRVRDWVQPLLEAPSGRYWIIDDTGF--PKKGKHSVGVARQYCGQLGKQDNCQVA-ADDATRRQKAGVPDDGVVLADAAYGDETGFRENLTELGLLYAVGIRSTTTVWPPGVSPLPAKPASGPGRPPKLLRRAPGHEPVSVKTLAMALPSSAYQVVTWREGINTALSSRRSTLRDEEWLLVEWPGGEAEPTKYFLSTAPADA-LIEQLVFVTKMRWRIERDYQDLKQELGLGHYEGRGWRGFHHHATLSIAAYGFLMAERLAADKPVGNKK...... 416
6 -12.100[L] COG3666 Transposase and inactivated derivatives  ali follow..  13  29.....NHVARVVNDMVESLDDQLFDEVYKGGGRP-AYHPKMMTKILLYGYTQKWFSCRAIAKALTEHARQTPDFRTINRFRSERLKPLMDTLFSALTHLLIKEGYVDGSSY-FLDGTKIEANANKYTKAGYNWQIGTQDQFILFYTVHPNPTDTRCLLPHVEA-KTLIADAGYGSESNYVAMADELFETLIPSHTFRQEQKRSFAKKRFHPYNWRCDETDDVYW---RKVSFKRYTKRTDPYGYARDFKVYECESCEGCPFKPECTKARGNRQVHYNPVYEE-----LKAKQHQKLKSEEGRTLYQKR-DVESVFGHVKQNLGFRRLHLRGKESVHIELGLVALAHNLRKRA.................. 527
7 -10.300[L] COG3039 Transposase and inactivated derivatives, IS5 family  ali follow..  14  16AEHEIGRELEAMSQWLDAHRVTSDLRRQGVTETGRQGLPSEAVLRCALLKQYRQLSYEELAFHLEDS-GWSPKKSVLHKTISAIRADTWEAVNKMLLASARQERLESGRVVRV-DSTVTAALIHEPSDSSLRVMVRLLQQADSLGSTIPWHDHCRAAKKRARVIEYTRGRPKRVQHYRALLRIARNTLDYLQQAAAQLPLAAGPAGKL-----WQAQVRHYQPLITQIIAQTERRVLAGEAVPAGEKLVSLFEPHADIIVKGSRDVDYGHKLNLT---TGRSGLILDLVIEAGNPADSERLLPLYNFRAGIEAGISCLKRTYGLARCTWRGLDHFKTYVWSSVVAYNLALFA.................. 439
8 -7.630[L] COG3293 Transposase and inactivated derivatives  ali follow..  20  202..............................................................................................................................................................................................................................................................................................................RLYRERNLIERFFSKLKHFRRIATRYDKLAANFLAMVQLASMRLWL-RAYESTA.............. 254
9 -6.970[TR] KOG4019 Calcineurin-mediated signaling pathway inhibitor DSCR1  ali follow..  1.................................................................................................................................................................................................................................................................................MEEVDLQDLPSATIACHLDPRVFVDGLCRA------KFESLFRTYDKDITFQYFKSFKRVRI................................... 56
10 -6.540[R] KOG3195 Uncharacterized membrane protein NPD008/CGI-148  ali follow..  18  1.............................................................................................................................................................................................................................................................................................MVLLLLSLDFWSVKNVT-LVGLRWWNQIIFEARKVSPNSIAATEAEARIFWLGLIICPMIWIVF..................... 74

FFAS is supported by the NIH grant R01-GM087218-01
1 3 1 7 3 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Grynberg M, Topczewski J, Godzik A., Paszewski A. The Aspergillus nidulans cysA gene encodes a novel type of serine O-acetyltransferase which is homologous to homoserine O-acetyltransferases. Microbiology. 2000 Oct;146 ( Pt 10):2695-703.