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Query: gi|15644653|ref|NP_206822.1| carboxynorspermidine decarboxylase (nspC) (HP0020) [Helicobacter pylori 26695], from H.pylori

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKKYSTIPTPCYVLESERLEKNAKILEIVRQQSGAKVLLALKGYAFWREFGILRQKLNGCCASGLYEAKLAFEEFGGRESHKEICVYSPAFKEAEMSAILPLATSIIFNSFYQYATYKDRILDKNKQLENLGLSPIKMGLRINPLYSEVTPAIYNPCSKVSRLGITPSGFEKGVKEHGLEGVSGLHFHTHCEQNADALCRTLEHVEKHFRPYLENMAWVNFGGGHHITKSDYDVNLLIQTIKDFKERYHNIEVILEPGEAIGWQCGFLIASVIDIVQNDQEIAILDASFSAHMPDCLEMPYRPSIFKVSVENDEELIEVEKGENQGAFSYFLGGPTCLAGDFMGSFSFETPLKRGDKIVFQDMLHYTIVKNNSFNGVPLPSLARLDQQGFKILKNFSYEDYKNRNLast
1 -72.500sp|O14977|AZIN1_HUMAN Antizyme inhibitor 1 OS=Homo sapiens GN=AZIN1 PE=1 SV=2  ali follow..  14  31.EHTLTGKNAFFVGDLGKIVKKHSQWQNVVA--QIKPFYTVKCNSAPAVLEILAALGTGFACSSKNEMALVQE---LGVPPENIIYISPCKQVSQIKYAAKVGVNLTCDNEIELKKIARNHPN------------AKVLLHIA------TEDNIGGEEGNMKFGTTLKNCRHLLECAKELDVQGVKFHVSSACKESQVYSDARCVFDMAGEIGFTMNMLDIGGGFTGTEFQLENHVISPLLDIYFPEGSGVKIISEPGSYYVSSAFTLAVNIIAKKVVENDTGSDEPAFMYYMNDGVYGSFASKLSED--LNTIPEVHKKYKEDEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADSFHEPSAFNDFQRPAIYYMMSFSDWQDAGITSDSMMKNF 429
2 -69.400sp|P11926|DCOR_HUMAN Ornithine decarboxylase OS=Homo sapiens GN=ODC1 PE=1 SV=2  ali follow..  12  31.VSSSDDKDAFYVADLGDILKKHLRWLKALP--RVTPFYAVKCNDSKAIVKTLAATGTGFDCASKTEIQLVQS---LGVPPERIIYANPCKQVSQIKYAANNGVQMTFDSEVELMKVAR------------------AHPKAKLVLRIATDDSKAVCRLSVKFGATLRTSRLLLERAKELNIDGVSFHVGSGCTDPETFSDARCVFDMGAEVGFSMYLLDIGGGFPGSEDVKLTGVINPALDKYFPSDSGVRIIAEPGRYYVASAFTLAVNIIAKKSEQTFMYYVNDGVYGSFNCILYDHAHVKPLLQK----------RPKPDEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTVAAASTFNGFQRPTIYYVMSGPAWQLQFQNPDFPPEVE 430
3 -68.300sp|Q96A70|ADC_HUMAN Arginine decarboxylase OS=Homo sapiens GN=ADC PE=2 SV=1  ali follow..  13  32.QATTDEVAAFFVADLGAIVRKHFCFLKCLP--RVRPFYAVKCNSSPGVLKVLAQLGLGFSCANKAEMELVQH---IGIPASKIICANPCKQIAQIKYAAKHGIQLSFDNEMELAKVVKSHPS------------AKMVLCIA------TDDSHSLSCLSLKFGVSLKSCRHLLENAKKHHVEGVSFHIGSGCPDPQAYADARLVFEMGTELGHKMHVLDLGGGFPGTEGAKVASVINSALDLYFPEGCGVDIFAELGRYYVTSAFTVAVSIIAKKESKTIVYHLDEGVYGIFNSVLFDNICPTPILQK----------KPSTEQPLYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNMGAYTVGMGSPFWGTQACHITYAMSRVAALRRQLMAAEQEDD. 430
4 -9.180sp|O94903|PROSC_HUMAN Proline synthase co-transcribed bacterial homolog protein OS=Homo sapiens GN=PROSC PE=1 SV=1  ali follow..  11  21...............NERVQQAVARRPRDLPAIQPRLVAVSKTKPADMVIEAYGHGQRTFGENYVQELLEKASNPKILSLCPEIKWHFIGLQKQNVNKLMAVPNLFMLETVDSVKLADKV---NSSWQRKGSPERLKVMVQIN------------TSGEESKHGLPPSETIAIVEKCPNLEFVGLMTHDLSQGPNPDFQLLLSLREELCKKLNIPADQVELSMGMS----------------------ADFQHAVEVGSTNV-RIGSTI........................................................................................................................................ 246
5 -6.780sp|Q92626|PXDN_HUMAN(removed signalp:1-26) Peroxidasin homolog OS=Homo sapiens GN=PXDN PE=1 SV=2 (Range: 1201-1453)  ali follow..  14  2............................................................................................................................................................................................................................................................................................................................................LGPTCLLSTQFKR------LRDGDRLWYENPGVFSPAQLTQIKQTSLARILCDNADNITRVQSDVF....... 63
6 -5.410sp|Q92673|SORL_HUMAN(removed signalp:1-28) Sortilin-related receptor OS=Homo sapiens GN=SORL1 PE=1 SV=2 (Range: 451-750)  ali follow..  10  4.......................................................................................................................................................................................SQLLNLQLRRMPILSKESAPGLIIATGSVGKNLAYISSSAGAR-------------------------EALPGPHYYTWGDHGGIITAIAQGMETNELKYSTNEGETWKTFIFSEKPVFVYGLLTEPGEKSTVFTIFGSNKENVHSWDALGVPCTENDY---KLWSPSDERGNECLLGHKTVFKRRTPHAFNGEDFDRPVVVSN---------TREDY.... 204
7 -4.740sp|Q7KZ85|SPT6H_HUMAN Transcription elongation factor SPT6 OS=Homo sapiens GN=SUPT6H PE=1 SV=2 (Range: 901-1200)  ali follow..  14VSLARRIQDPLEHVVKEELLNALYEFINRVNEVGVDVNRAIAHPYSQALIQYV----CGLGPRKGTHLLKILKQNNTRLE-----------SRTQLVTMCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGS-----RVHPETYEWARKMAVDALEDANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRY---------------LRTAYRSPNTEEIFNMLTKETPE----FYIGKLIIC-------NVTGIAHRRPQGESYDQAIRNDETGLWQCPF........................................................................................................ 300
8 -4.560sp|P52943|CRIP2_HUMAN Cysteine-rich protein 2 OS=Homo sapiens GN=CRIP2 PE=1 SV=1  ali follow..  1..................................................................................................................................................................MASKCPKCDKTVYFAEKVSSLGKDWHKFC------------------------------------------------KCERCSKTLTPGGHAEHDGKPFCHKP--CYATLFGPKGVNIGGAGSYIYEKPLAEGPQVTGPIEVPAARAEERKASGPPKGPSRASSVTTFTGEPNTCPRCS--------KKVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYCHKPCYGILFGPK 186
9 -4.560sp|Q9UNG2|TNF18_HUMAN Tumor necrosis factor ligand superfamily member 18 OS=Homo sapiens GN=TNFSF18 PE=1 SV=1  ali follow..  14  80............................................................................................................................................................................................................................................................NKVSDWKLEILQNG------------------------------LYLIYGQVAPNANYNDVAPFEVRLYKNKDMIQTLTNKSKIQNVGGTY-------ELHVGDTIDLIFNSEHQVLKNNTYWGI............................ 167
10 -4.500sp|Q68DN6|RGPD1_HUMAN RANBP2-like and GRIP domain-containing protein 1/2 OS=Homo sapiens GN=RGPD1 PE=1 SV=2 (Range: 1-300)  ali follow..  12  21.............FYFAKLYYEAKEYDLAKKYVCTYLSVQERDPRAHRFL--------GLLYELEENTEKAVECYRRSLELNPELLCKNDVTDGRAKYWVERAAKLFPGSPAIYKLKEHLLDCEGEDGWNKLFDWIQSELYVRPDDVHMNIRLVELYRSNKRLKDAVARCHEAERNIALRS--SLEWNSCVVQTLKEYLESLQCLESDKSDWRA-LAYANLM----LTLSTRDVQESRELLESFDSALQ--ATFLEMKGHFYMHAGSLLLKMGQHGNN............................................................................................................................... 298

FFAS is supported by the NIH grant R01-GM087218-01
1 3 1 9 1 3   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.