current user: public

Please be advised that we have recently moved our server to a new location. We tried our best to fully test all functions on the website, but if something does not work for you please let us know.

Query: gi|15644651|ref|NP_206820.1| hypothetical protein (HP0018) [Helicobacter pylori 26695], from H.pylori

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280    .  290    .  300    .  310    .  320    .  330    .  340    .  350    .  360    .  370    .  380    .  390    .  400    .  410    .  420    .  430    .  440    .  450    .  460    .
# Score Template Links and tools%idFirst MKIFVLLMSVILGISLTGCIGYRMDLEHFNTLYYEESPKKAYEYSKQFTKKKKNALLWDLQNGLSALYARDYQTSLGVLDQAEQRFDKTQSAFTRGAGYVGATMINDNVRAYGGNIYEGVLINYYKAIDYMLLNDSAKARVQFNRANERQRRAKEFYYEEVQKAIKEIDSSKKHNINMERSRVEVSEILNNTYSNLDKYEAYQGLLNPAVSYLSGLFYALNGDENKGLGYLNEAYGISQSPFVAQDLVFFKNPNRSHFTWIIIEDGKEPQKSEFKIDVPIFMIDSVYNVSIALPKLEKGEAFYQNFTLKDGEKVTPFDTLASIDAVVASEFRKQLPYIITRAILSATFKVGMQAVANYYLGFVGGLVTSLYSGVSTFADTRSTSIFAHKIYLMRIKNKAFESYEVRADSIDAFSFSLKPCKRSLESPKIIDARELLSGFVAAPQIFCSNRHNILYVRSFKNGFVLSRLKLast
1 -12.000sp|Q14674|ESPL1_HUMAN Separin OS=Homo sapiens GN=ESPL1 PE=1 SV=3 (Range: 717-845)  ali follow..  27.................................QSKCLDQALALWKELLRCLQQTAASLQILAALYQLVAKPMQALEVLLLLRIVSERL------------------------KDHSKAAGSSCHITQLLLTLGCPSYAQLHLEEAASSLKH............................................................................................................................................................................................................................................................................................................................. 129
2 -9.100tr|F8WDN4|F8WDN4_HUMAN Uncharacterized protein OS=Homo sapiens GN=TTC21A PE=4 SV=1 (Range: 1-91)  ali follow..  10  3...................SNDSSLMAGIIYYSQEKYFHHVQQAAAVGLEKFSNDPVLKFFKAYGVLKEEHIQDAISDLESIRHHPD.............................................................................................................................................................................................................................................................................................................................................................................................. 70
3 -7.010sp|Q9Y5A7|NUB1_HUMAN NEDD8 ultimate buster 1 OS=Homo sapiens GN=NUB1 PE=1 SV=2 (Range: 209-374)  ali follow..  13  16..............................................RIPPSERKALMLAMEKGRAFLKRKEYGIALPCLLDADKYFCECCRELLDTVDNYAVLQLDKCFKNCYGENHQRLVLYLLQGIRNYHSGNDVEAYEYLNKARQLFKEL............................................................................................................................................................................................................................................................................................................................ 165
4 -6.960sp|Q8TF17|S3TC2_HUMAN SH3 domain and tetratricopeptide repeats-containing protein 2 OS=Homo sapiens GN=SH3TC2 PE=1 SV=2 (Range: 596-735)  ali follow..  1............GALLACLPDRESSAKHELDVVAYV-LRQGIVVGSSPLEARACFLA-----IRLLLSLGRHEEVLPFAERLQLLSGHPPASEA---------------------------VASVLSFLYDKKYLPHLAVASVQQHGIQSAQGMSLPIWQVHLVLQNTTK........................................................................................................................................................................................................................................................................................................... 125
5 -6.660sp|O43242|PSMD3_HUMAN 26S proteasome non-ATPase regulatory subunit 3 OS=Homo sapiens GN=PSMD3 PE=1 SV=2 (Range: 162-355)  ali follow..  94............................LRNYLHYSLYDQAEKLVSKSVFNNNEWARYLYYTGRIKAIQLEYSEARRTMTNALRKAPQ------------------------HTAVGFKQTVHKLLIVVELLLGEIPDRLQSLKR.................................................................................................................................................................................................................................................................................................................................... 194
6 -5.440tr|E7ES35|E7ES35_HUMAN Uncharacterized protein OS=Homo sapiens GN=TTC38 PE=4 SV=1 (Range: 1-131)  ali follow..  26................EACKLFDATLTQYVKWTNDKSLGGIEGCLSKLKAADPTFVMGHAMATGLVLIGTG---------SSVKLDKELDLAVKTMVEISRTQPLTRR---------EQLHV---SAVETFANGYVKGI.......................................................................................................................................................................................................................................................................................................................................... 127
7 -5.360tr|E9PL38|E9PL38_HUMAN Uncharacterized protein OS=Homo sapiens GN=PSMD13 PE=4 SV=1 (Range: 1-128)  ali follow..  19  51....................................DPNVALTFLEKTREKVKSSILCKTAIGALKLNIGDLQVTKETIEDVEEMLNNL-----------------PGVTSVHSRFY-DLSSKYYQTI..................................................................................................................................................................................................................................................................................................................................................... 128
8 -5.320sp|Q06495|NPT2A_HUMAN Sodium-dependent phosphate transport protein 2A OS=Homo sapiens GN=SLC34A1 PE=1 SV=1 (Range: 562-639)  ali follow..  12  12...........................................................................................................................................................................................................................................................................................................................................................................................LQTWDFLPRWMH----SLKPLDHLITRA.............................................................. 35
9 -5.310tr|E7EVI2|E7EVI2_HUMAN Uncharacterized protein OS=Homo sapiens GN=FAM82B PE=4 SV=1 (Range: 85-164)  ali follow..  20  1.......................EILEQADYLYESGETEKLYQLLTQYKESEDAELLWRLARAVAQLSRTSEEEKKLLVYEALEYAKR............................................................................................................................................................................................................................................................................................................................................................................................. 68
10 -5.110tr|C9JA41|C9JA41_HUMAN Uncharacterized protein OS=Homo sapiens GN=KIAA1324L PE=4 SV=1 (Range: 441-855)  ali follow..  1............................................................................................................................................................................................................................................................................................................................................................................................KWWNVLPGNMKTSCFNVVAGDHIQSGAGGSDNLILNLHIPGFKPPTSMTGATGSELGRITFVFETLCSADCVLYFMVDINRKSTNVV.. 101

FFAS is supported by the NIH grant R01-GM087218-01
1 3 1 9 1 3   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.