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Query: gi|15644644|ref|NP_206813.1| co-chaperonin GroES (HP0011) [Helicobacter pylori 26695], from H.pylori

Results of FFAS03 search in SCOP207
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKFQPLGERVLVERLEEENKTSSGIIIPDNAKEKPLMGVVKAVSHKISEGCKCVKEGDVIAFGKYKGAEIVLDGTEYMVLELEDILGIVGSGSCCHTGNHDHKHAKEHEACCHDHKKHLast
1 -47.900d4pj11_ b.35.1.0 (1:) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  37  6.KFLPLFDRVLVERSAAETVTKGGIMLPEKSQGKVLQATVVAVGSGGEIQPVSVKVGDKVLLPEYGGTKVVLDDKDYFLFRDGDILGKYVD........................... 100
2 -47.300d3nx6a_ b.35.1.0 (A:) automated matches {Xanthomonas oryzae [TaxId: 291331]}  ali model 3D-neighbors follow..  39  1.SIKPLHDRVVVKPIEADEVSAGGIVIPDSAKEKSTKGEVVAIGAGGSLHAPVVKVGDKVIYGQYAGSSYKSEGVEYKVLREDDILAVIG............................ 94
3 -9.200d1g31a_ b.35.1.1 (A:) GP31 co-chaperonin {Bacteriophage T4 [TaxId: 10665]}  ali model 3D-neighbors follow..  21  3LPIRAVGEYVILAQAGDEEVTESGLIIGKRVQEVPELCVVHSVGPDVPEG---CEVGDLTSLPVGQIRNVKEIKQKFVTCHYKAIPCLYK............................ 107
4 -6.460d2yuba1 b.36.1.0 (A:8-112) automated matches {Mouse (Mus musculus) [TaxId: 10090]}  ali model 3D-neighbors follow..  15  3...DQLPYSVTLISMPATTECRRGFSVTVESASSNYATTVVNRMHISPNNRNAIHPGDRIL---------EINGTPVRTLRVEEVEDAIKQTSQ........................ 88
5 -6.350d1wi4a1 b.36.1.1 (A:8-103) Syntaxin binding protein 4 {Mouse (Mus musculus) [TaxId: 10090]}  ali model 3D-neighbors follow..  13  1...SPLDRDPAFRVITVTKETGLGLKILGGINRNEGPLVYIHIPGGDCYKDGRLKPGDQLV---------SINKESMIGVSFEEAKSIITRAKL........................ 84
6 -6.250d3sfja_ b.36.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  15  1...TAVVQRVEIHKLRQGENLILGFSIGGGIDQDPSQNPVTRVSEGGPAEIAGLQIGDKIM---------QVNGWDMTMVTHDQARKRLTKRSE........................ 93
7 -6.060d3cbza1 b.36.1.1 (A:264-367) Segment polarity protein dishevelled homolog Dvl-2 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  13  1........NIITVTLNMEKYNFLGISIVGQSNERGDGGIYIGMKGGAVAADGRIEPGDMLL---------QVNDMNFENMSNDDAVRVLRD........................... 76
8 -5.970d1x6da1 b.36.1.2 (A:8-113) Interleukin 16 {Human (Homo sapiens) [TaxId: 9606]}  ali model 3D-neighbors follow..  15  4....KQLDGIHVTILHKEEGAGLGFSLAGGADLENKVITVHRVFPNGASQEGTIQKGNEVL---------SINGKSLKGTTHHDALAILRQ........................... 82
9 -5.950d1qzga_ b.40.4.3 (A:) Protection of telomeres protein 1, Pot1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}  ali model 3D-neighbors follow..  44..........IVKDFTPSRQSLHGVYLWDPTCDTSSIGLQIHLSKQGNDLPVIKQVGQPLLLHQIT----SYRDRTQGLSKDQFRYALWPDFSSNSKDTLCPQPMPRLMKTGDKEEQF 157
10 -5.930d1s7ia1 d.58.4.9 (A:7-122) Hypothetical protein PA1349 {Pseudomonas aeruginosa [TaxId: 287]}  ali model 3D-neighbors follow..  11  34.................DQLGKAGHYIASHALQSVQTATTLRHQGGRL----------AMTDGPFAETKEQLGG--FYLIEARDLNQALQIAAKIPPGRLGCVEVRPVKE........ 114

FFAS is supported by the NIH grant R01-GM087218-01
1 2 7 7 1 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I. and Godzik A Connecting the Protein Structure Universe by Using Sparse Recurring Fragments. Structure (Camb.) (2005) Aug;13(8):1213-24