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Query: sp|Q99490|AGAP2_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=AGAP2 PE=1 SV=2, from H.sapiens

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst QTHLVLIREEAGAPDAKFSGWADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVGTQDRISASSPRVVGDARARALCADMKRCSYYETCATYGLNVDRVFQEVAQKVVTLRKQQQLLAACKSLPSSPSHSAASTPVAGQASNGGHTSDYSSSLPSSPNVGHRELRAEAAAVAGLSTPGSLHRAAKRRTSLFANRRGSDSEKRSLDSRGETTGSGRAIPIKQSFLLKRSGNSLNKEWKKKYVTLSSNGFLLYHPSINDYIHSTHGKEMDLLRTTVKVPGKRPPRAISAFGPSLast
1 -38.600IDP92596 Ras family domain-containing protein [Toxoplasma gondii ME49] TGME49_089680 [Toxoplasma gondii ME49]  ali follow..  18  59KVIKAQIWDTAGQERYRYYRGAVGALLVYDITKRQSFENVERWLKELRDHAD---PNIVILLVGN--KSDLKHLRAVSVEEATKFANREH-LAFIETSALDATNVEQAFHQILAEIYLLRQKKQIEDNPQSTTQPGRGQKIH.............................................................................................................................................................. 199
2 -37.900IDP92608 Rab 11b, putative [Toxoplasma gondii ME49] TGME49_120480 [Toxoplasma gondii ME49]  ali follow..  16  59GTVKAQIWDTAGQERYRHYRRAVGALLVYDVTRKSTFLNASKWLEELRQNSE---PDIVIMMVGNKLDLKDPTARDVPYELAAKFAQANG-LYFSEASAVTAFNVKHIFEHLLQEIYNHRTQGEEFSGRAN......................................................................................................................................................................... 192
3 -37.000IDP92746 Ras family GTPase [Legionella longbeachae NSW150] YP_003456732 [Legionella longbeachae NSW150]  ali follow..  20  57KTIKLRIWDASGAPGLQYFHHADGAFICFDLTNLRSFYNAKVLIERFRA----SNKEAPIILVGC--KSDLIELRNVSCKEANELANHFG-LTYIETSARKEINVKEGFKLLSRQIYFLAQIKKIKPILEG......................................................................................................................................................................... 185
4 -6.840IDP02063 gene: cgtA; GTP-binding protein, GTP1/Obg family [Coxiella burnetii RSA 493] CBU_0387 [Coxiella burnetii RSA 493]  ali follow..  228...........GVQFLKHLERTQLLLHIVDIAPSDPVQSIQAIISELEQFSQNLSQKPRWLVF---NKIDLLPPDVAQARCQEIINRLNWKGPVYKISAIKRQGTELLCYDLMSFLETNQRS.................................................................................................................................................................................. 338
5 -6.200IDP02199 gene: lepA; GTP-binding protein LepA [Coxiella burnetii RSA 493] CBU_1505 [Coxiella burnetii RSA 493]  ali follow..  10  86HFYQLNFIDTPGHVDFRSLAACEGALLVVDAAQGVEAQTVATCYTAIEQ-------GLVVLPVLNKIDLPQADPERAIQEIEDVIGIE--AHDAIRVSAKEGRGVKELLEQLVVAI........................................................................................................................................................................................ 197
6 -6.030IDP01757 gene: obgE; GTPase ObgE [Yersinia pestis CO92] YPO3509 [Yersinia pestis CO92]  ali follow..  10  209....FVIADIPGLIEIRFLKHLE--VLLHLVDESDPAENAKVIVNELQQYSENLAEKPRWLVF---NKIDLIDPEEAEKRAKAIVETLGWEGKYYMISAANRDNVNALCWDVMSFLNSQPKAMAIAESVPE......................................................................................................................................................................... 347
7 -5.910IDP02115 hypothetical protein FTT0900 [Francisella tularensis subsp. tularensis SCHU S4] FTT0900 [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  13  1...MMTLQEEKIQAPVFFKEYVKGRFILNIGEYNHPLTQVLEYQDKIDDIQSIKKSHLEIILIGTGEKQLLPPLEIINQIAKAGKSVDFTACKTYNLLVNENRNVSCII............................................................................................................................................................................................... 122
8 -5.830IDP01790 gene: obgE; GTPase ObgE [Francisella tularensis subsp. tularensis SCHU S4] FTT1731c [Francisella tularensis subsp. tularensis SCHU S4]  ali follow..  12  227...........GLRFLKHLTRARCVLHVVDICPSDPVENYFAVEKELEKYSQELFDKPRFLVI---NKIDLLADKVEQKCQ-EFVEQIGYQGNYYTISAAMKKGTDELAKKLNEFLQKQE.................................................................................................................................................................................... 334
9 -5.830IDP04532 gene: obgE; GTPase ObgE [Salmonella typhimurium LT2] STM3301_1_390 [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]  ali follow..  11  209....FVVADIPGLIEIRFLKHLERCVLLHLIDGSDPVENARIIIGELEKYSQDLAAKPRWLVF---NKIDLMDKTEAEEKAKAIAEALGWEGKYYLISAASQLGVKDLCWDVMTFIIENPIAQAEEAKQPE......................................................................................................................................................................... 347
10 -5.750IDP02682 gene: era; GTP-binding protein Era [Coxiella burnetii RSA 493] CBU_1502 [Coxiella burnetii RSA 493]  ali follow..  14  52KDIQVIYVDTPGRTARGALRDVDAIVFVIEPHWESQDAWVLDNLKEI---------ETPVFLV---NKVDKIKNRAELLPLIEKVSSLYAFQKITPLSAKTGDQVGTLEQAVHQLM........................................................................................................................................................................................ 170

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Godzik A. cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics. 2006 May 26;