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Query: sp|Q99490|AGAP2_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=AGAP2 PE=1 SV=2, from H.sapiens

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst QTHLVLIREEAGAPDAKFSGWADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVGTQDRISASSPRVVGDARARALCADMKRCSYYETCATYGLNVDRVFQEVAQKVVTLRKQQQLLAACKSLPSSPSHSAASTPVAGQASNGGHTSDYSSSLPSSPNVGHRELRAEAAAVAGLSTPGSLHRAAKRRTSLFANRRGSDSEKRSLDSRGETTGSGRAIPIKQSFLLKRSGNSLNKEWKKKYVTLSSNGFLLYHPSINDYIHSTHGKEMDLLRTTVKVPGKRPPRAISAFGPSLast
1 -5.760tr|A6NNV8|A6NNV8_HUMAN Uncharacterized protein OS=Homo sapiens GN=B3GALNT2 PE=4 SV=3  ali   13  54.........................VVVGVLSARNNHEL-STWMRHLLQHPTLSQRVLVKFIIGAHGC-EVPVEDREDPYSCKLL....................................................................................................................................................................................................................... 116
2 -5.210sp|Q6ZSG2|F196A_HUMAN Protein FAM196A OS=Homo sapiens GN=FAM196A PE=2 SV=1  ali   10  8......................................DLKAQLQMMENLISSSQETIKVLL-------ELEKGEAHREGLSYRTGQDTANCDTCRNSACIIYSVELDFKQQEDKLQP...................................................................................................................................................................................... 84
3 -4.990sp|Q9Y2B1|TMEM5_HUMAN Transmembrane protein 5 OS=Homo sapiens GN=TMEM5 PE=2 SV=1  ali   11  41GRTQYSFITGPAVIPGYFSVDVNNVVLILNGREKAKIFYATQWLLYAQNLQIQKLQHLAVVLLGNEH------------------CDNEWINPFLK---RNGGFVELLFIIYDSPWINDVD................................................................................................................................................................................... 141
4 -4.900sp|Q9H091|ZMY15_HUMAN Zinc finger MYND domain-containing protein 15 OS=Homo sapiens GN=ZMYND15 PE=2 SV=1  ali   9................LFQGPKPDLVIGFN----SGFALKDTWLRSLPRLQ---SLRVPAFFTESSEYSCVMDGQTMAVATGGGTSPPQPN-PFRSPFRLRAADNCMSWYC............................................................................................................................................................................................. 95
5 -4.800sp|Q8IUC6|TCAM1_HUMAN TIR domain-containing adapter molecule 1 OS=Homo sapiens GN=TICAM1 PE=1 SV=1  ali   18  11...........................AFDILGAAGQDKLLYLKHKLKTPRPGCQGQMVLLKLGQETEARISLEALKADAVARLVARQWAGVD--EEPPDVSWAVARLYHLLAEE......................................................................................................................................................................................... 106
6 -4.500sp|Q92520|FAM3C_HUMAN Protein FAM3C OS=Homo sapiens GN=FAM3C PE=1 SV=1  ali   12  58DTKYFDMWGGDVAPFIEFLKAIDGTIVLMGTYDDGATKLNDEARRLIADLGSTSITNLNWVFCGGKGIKTKSPFEQHIKNNKDTNKYEGWPEV-VEMEGCIPQKQD.................................................................................................................................................................................................. 167
7 -4.480sp|Q14444|CAPR1_HUMAN Caprin-1 OS=Homo sapiens GN=CAPRIN1 PE=1 SV=2  ali   9QYVLDKLGDD--EVRTDLKQGLNGVPIL----SEEELSLLDEFYKLVNEQYEHASIHLWDLLEGKEKPVCGTTYKVL-----KEIVERVFQSNYFDSTHNHQNGL................................................................................................................................................................................................... 112
8 -4.430tr|E7EPU6|E7EPU6_HUMAN Uncharacterized protein OS=Homo sapiens GN=AGPAT3 PE=4 SV=1  ali   12  2...........................VYDVT---------------LNFRGNKNPSLLGILYGKKYEADMCVRRF-----------PLEDIPLDEKEGHCWPVAPVTHPEPGATLEAPRREGPGPPTGVWPVKLPAWA................................................................................................................................................................. 87
9 -4.400sp|Q99687|MEIS3_HUMAN Homeobox protein Meis3 OS=Homo sapiens GN=MEIS3 PE=1 SV=3  ali   18  1.............................DVCSSDSFNDIAAFAKQVRSERPSSNPELDNLMI---QAIQVLRFHLLELEKVHDLCDNF--CHRYITCLKGKMPIDLVIED............................................................................................................................................................................................. 80
10 -4.330sp|Q9H1A4|APC1_HUMAN Anaphase-promoting complex subunit 1 OS=Homo sapiens GN=ANAPC1 PE=1 SV=1  ali   11  12ELCIDHLWTETITNIREKNSQASKVFITSDLCGQKFLCFLVESQLQLRCVKFQESNDKTQLIFGSVTNIPAKDAAPVEKIDTMLVLEGSGNLVLYTGVVR........................................................................................................................................................................................................ 111

FFAS is supported by the NIH grant R01-GM087218-01
1 3 3 2 1 4   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Berman HM, Burley SK, Chiu W, Sali A, Adzhubei A, Bourne PE, Bryant SH,Dunbrack RL Jr, Fidelis K, Frank J, Godzik A, Henrick K, Joachimiak A, HeymannB, Jones D, Markley JL, Moult J, Montelione GT, Orengo C, Rossmann MG, Rost B,Saibil H, Schwede T, Standley DM, Westbrook JD. Outcome of a workshop on archiving structural models of biological macromolecules. Structure. 2006 Aug;14(8):1211-7.