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Query: sp|Q99490|AGAP2_HUMAN Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 2 OS=Homo sapiens GN=AGAP2 PE=1 SV=2 (Range: 451-750), from H.sapiens

Results of FFAS03 search in PfamA32U
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst QTHLVLIREEAGAPDAKFSGWADAVIFVFSLEDENSFQAVSRLHGQLSSLRGEGRGGLALALVGTQDRISASSPRVVGDARARALCADMKRCSYYETCATYGLNVDRVFQEVAQKVVTLRKQQQLLAACKSLPSSPSHSAASTPVAGQASNGGHTSDYSSSLPSSPNVGHRELRAEAAAVAGLSTPGSLHRAAKRRTSLFANRRGSDSEKRSLDSRGETTGSGRAIPIKQSFLLKRSGNSLNKEWKKKYVTLSSNGFLLYHPSINDYIHSTHGKEMDLLRTTVKVPGKRPPRAISAFGPSLast
1 -45.200PF00071.22; RAB9A_CANLF/9-174; Ras family  ali follow..  25  46HFVTMQIWDTAGQERFRFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADKEPESFPFVILGNKIDIS---ERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLA...................................................................................................................................................................................... 166
2 -25.400PF08477.13; H0ZCZ3_TAEGU/7-122; Ras of Complex, Roc, domain of DAPkinase  ali follow..  18  46ELHKFLIWDTAGQERFRYYRGSAAAIIVYDITKEETFSTLKNWVKELRQHGP---PNIVVAIAGNKCDL....................................................................................................................................................................................................................................... 116
3 -23.100PF04670.12; Q9VHJ4_DROME/4-230; Gtr1/RagA G protein conserved region  ali follow..  46GNLVLNLWDCGGQEGFMIFRNVEVLIYVFDVESQEIERDIHYYQSCLEALLQNS-PEAKIFCLVHKMDLVPEGLRESVFTERMEDLIKLSNVTCFRTSIWDE-TLYKAWSSIVTMLIPNVAA.................................................................................................................................................................................. 178
4 -16.500PF00025.21; TRI23_RAT/390-564; ADP-ribosylation factor family  ali follow..  11  56KNLKFTIWDVGGKHKLRYYLNTQAVVFVVDSSHRDRISEAHSELAKL--LTEKELRDALLLIFANKQDVGALSVEEITELLSLHKLCCGRSWYIQGCDARSGMGLYEGLDWLSRQL........................................................................................................................................................................................ 175
5 -15.800PF11111.8; U3KB97_FICAL/1-173; Centromere protein M (CENP-M)  ali follow..  51...SLPLPSERDHLRPR----IDMVVFMIDIKSKYSLKNVETSLAHVDASFFLGK----VCFLVT--GVGRVNACSIETNAVCKLAEAY-CSPVLFCELELEGVRAATAQRLLRML........................................................................................................................................................................................ 152
6 -9.710PF09439.10; SRPB_YEAST/36-221; Signal recognition particle receptor beta subunit  ali follow..  10  44DGSGVTLVDFPGHVKLR-AKFVKGLIFMVDTVDPKKLTTTAEFLVDISITESSCENGIDILIACNKSELFTARPDALESEIQKVIERRKKSLNEVERKINEEDYAENTFANLEASV........................................................................................................................................................................................ 186
7 -7.890PF10662.9; A6TJW6_ALKMQ/1-140; Ethanolamine utilisation - propanediol utilisation  ali follow..  40......VLDTPGEYIEN-SADCDVIGILQAIDEPNC----------IFPPGFGNFFNKPVIGI---TKIDLEH----DSGNVESDLYAAGAQQIFRISAVTGEGLEELRVYMEE.......................................................................................................................................................................................... 140
8 -7.120PF16897.5; W1QBA2_OGAPD/184-290; C-terminal region of MMR_HSR1 domain  ali follow..  10  27..................YRMNSCDVQFRCDATVDDLIDV---------IEAKNRRYIPAIYVLN--KIDS-----FSIEELDLLYRIPNAVP---ISSGSGWNLDELLEMMWDRL........................................................................................................................................................................................ 105
9 -6.690PF00009.27; EF2_METJA/19-258; Elongation factor Tu GTP binding domain  ali follow..  11  68NEYLINLIDTPGHVDFRAMRAIDGAIVVVCAVEGVMPQTETVLRQAL-------RERVKPVLFINKVDRLINELKLTPEELQSRF-------------IKIINDINNLIRKMAPEE........................................................................................................................................................................................ 168
10 -6.580PF09967.9; A8LP31_DINSH/298-423; VWA-like domain (DUF2201 topsan)  ali follow..  1........................IVLAIDSSGSVTGDQLAHFAAQIARIGRRVLAEIHVLIFDET----------VQSAHKMRGTHWAATLAGWDFARDGGTSFVDVLERAAAL......................................................................................................................................................................................... 81

FFAS is supported by the NIH grant R01-GM087218-01
1 2 8 9 7 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Database searching by flexible protein structure alignment. Protein Sci. 2004 Jul;13(7):1841-50.