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Query: HGC00164 gi|163636082|dbj|BABG01000191.1|4.0 TMP00833;, from HGM_OVER

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MNDLIVDVKLWGESVGSLYWEKESNAALFDYERKFIRSGLDISPIIMPISQYRNTPYRFLENRTDCFKGLPGLFADSLPDTFGNQIINEWFASKGLSGEEITPLDRLCYVGKRGMGALEFEPSSPINGMNESSVLHIEELTELAKSVFTDRMAFQVQLRQEGRNILDILKVGTLast
1 -40.200IDP93888 hipa protein [Yersinia enterocolitica subsp. palearctica Y11] YP_006006247 [Yersinia enterocolitica subsp. palearctica Y11]  ali follow..  11  1MARQRLNIWMNGQHVGYWEKN--RGEESLVYAQEWLANEQGRPSLSLPFTANNQ---------VYRGNIVRDYFDNLLPDSDDI----RRRLATKYHADSINPFDLLFELGRDCVGAIQLLTDDAPPSDLFSQPLTESDVARILRNSLSDNADLRLSIAGAQEKTALLFHDNR 172
2 -5.870IDP91985 collagen adhesion protein [Streptococcus pneumoniae str. Canada MDR_19A] SpneCM_010100007069 [Streptococcus pneumoniae str. Canada MDR_19A]  ali follow..  16  65......................................................................................ITSKLGTETQTETQSEPLDVVLVA--DFSGSMEERDVWSYSSRRYIS--RIEALKHTLKGVIGRQGLIDTILSNSQNRLSIVGFAGK 147
3 -5.780IDP93808 general secretion pathway protein L [Yersinia enterocolitica subsp. enterocolitica 8081] YP_001007732 [Yersinia enterocolitica subsp. enterocolitica 8081]  ali follow..  260............................................LLTFVTEPTLSGYYAQQHAEQIQQKTQQLYLKNFPGA--IQGIAQQIHQLEKDITPPGLLSQLRAAMP-KTQAMEWQSETLALTFNLAEPELLARIPRQNANKLNITTHPMDQQHTLLTVKGANNNDKD 399
4 -5.450IDP95071 ATP-dependent protease ATP-binding subunit ClpX [Peptoclostridium difficile 630] YP_001089820 [Peptoclostridium difficile 630]  ali follow..  12  61PKPKEMMEILNDYVIGQEKAKKALSVAVYNHYKRIYSKKSSSKDIEIQKSNILLLG----------------------PTGSGKTLLAQTLARTLNVPFAMADATSLTEAG---VGE-LIQAADFDIEKAERGIIYIDEIDKIARKSENPSITRDVSGEGVQQALLKILEGTV 216
5 -5.330IDP95180 pullulanase-specific type II secretion system integral cytoplasmic membrane protein [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] YP_002917865 [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044]  ali follow..  256............................................ALLAGANSVLDHRDLARQAEAAQQASRAFYHRWFPTE--RLQMQQHLQTLTRQAQHAPLVDRLSALQN-RLRALSWDAAGNR-DIAAVSSRALEQFTQRAQPFRVRPGDMITKPDGIEGQLTLEENDG. 397
6 -5.260IDP91819 gene: yjhQ; KpLE2 phage-like element; predicted acetyltransferase [Escherichia coli str. K-12 substr. MG1655] b4307 [Escherichia coli str. K-12 substr. MG1655]  ali follow..  10  9...........................................................HITDKSDASDIREVETRAFGFSKEADLVASLLE----DESARPALSLLARYEGKAVGHILFTRATFKGEMDSPLMHILAPLA-----VIPEYQGMGVGGRLIRTGIEHLRLMG. 112
7 -5.240IDP00570 putative oxidoreductase YPO2042 [Yersinia pestis CO92]  ali follow..  12  5LNAHEARV------IGCLLEKQVTTPEQYPMSLNGLTLACNQKTSRDPV-MELSESQVQQTLDFLLKKHLIRSQSGNRVMKYEHRFCNSEFGDLKFSPAEVAVITLLLLRGAQTPGELRTRTN------RMYEFADVAETEETLKTLSLRED..................... 143
8 -5.230IDP00680 gene: clpX; ATP-dependent protease ATP-binding subunit SACOL1721 [Staphylococcus aureus subsp. aureus COL]  ali follow..  14  63.TPKEIMDHLNEYVIGQEKAKKSLAVAVYNHYKRIQQLGPKEDDVELQKSNIALIG----------------------PTGSGKTLLAQTLAKVPFAIADATSLTEAGYVGDD-ILLRLIQAADFDIDKAEKGIIYVDEIDKIARKSENTSITRDVSGEGVQQALLKILEGTT 217
9 -5.120IDP91381 Beta-galactosidase/beta-glucuronidase [Vibrio vulnificus CMCP6] VV1_1469 [Vibrio vulnificus CMCP6]  ali follow..  74..DYHAEVRLNGIAVF----DCDKSQFEYRKDRPYLQHG---NRFEILFLEEEEELLFEEDRLALCELG----------NAYQPSDERREPYLQFIRHVRLDCVTTEQIWHHGGGCEFKVDLYYQTYVSGLISASVKFDGRRYNIPLDLRSDHASALFQIDAPSP........ 226
10 -4.940IDP06065 hypothetical protein jhp0520 [Helicobacter pylori J99] NP_223238 [Helicobacter pylori J99]  ali follow..  26...................................................................................KTVAKRQERTNASMKLTLQEAEILIQ--QRALGNIDILTQE------SSLKTELKALKQRNSEYKGESDKYKNRIKQLEQKIEALL.... 110

FFAS is supported by the NIH grant R01-GM087218-01
1 3 1 8 8 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.