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Query: HGC00429 gi|162734516|dbj|BAAZ01029480.1|1.0 TMP00411;, from HGM_OVER

Results of FFAS03 search in CSGID
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MLKENQGYVIRRTILFDNQCGFALGENSRAPNPFVTWQFNGQDGHRDYFWGHYMNEPDMAERDLLNRARDYQRRYHVEEVEQAPDKETYLYYSTQRPIDIGTYPNSYFNRPVHMDLYFTRQQVTGEIFQAWGAITYAHPLTEREMQDYELRPSRNNLDIRRQMDAQAQVVGKWEDAHHVPDQKRLTWFYPDFGSYVVKEYVTPDQLAVRVRSIERQEAARAHKEAKRQPPIAEQLKAAQREAQGHRGPELPKRSPLast
1 -6.410IDP05737 hypothetical protein CD1990 [Clostridium difficile 630] CD1990 [Peptoclostridium difficile 630]  ali follow..  8....DINSLKLKSIPEGKIVKLKCVDG--------IWAEVESNYDKGWLLYKYLERLSNAKNNSNDTIKNRKKNYIGNIRTNGLSLELRNDRTLESKV-ITTIPDGFKVEVCYSVGKWARVNINKNEKRYSGYV......................................................................................................................... 128
2 -6.160IDP90142 unknown [Monkeypox virus] MPXV_ZAI1979_005_188 [Monkeypox virus]  ali follow..  11....SPQHCGCDRLTSIDDVRQCL-------TEYIYWSSYAYRNRQCA--GQLYGTLLSFKDDAESVFIDVRELVKN.................................................................................................................................................................................. 74
3 -5.880IDP93904 gene: yscP; putative type III secretion protein [Yersinia enterocolitica subsp. enterocolitica 8081] YP_001004080 [Yersinia enterocolitica subsp. enterocolitica 8081]  ali follow..  1........................................................................................MNKITTRSPLEPEYQPLGKPHHDLQ------------------ARVDFEQ----------ALLHNKDNRHPKEEPRRPVRPHDLGKKEGQKGDGLRAHAPLAATFQPGREVGLKPQHNHQNNHDFNLSPLAEGATNRKHLYQQDSRFDDRVESIINALMPLAPFLEG 139
4 -5.490IDP90208 gene: m139R; m139R MYXV_gp143 [Myxoma virus (strain Lausanne)]  ali follow..  10  41.......YVFKNTIDASDDIVSIL-------HNYIWYRGFIGLPNK---YGRVFKELKLFDIDAKTKYGDINTLFFMLNLNSDRCCRNFSNFVTLQ--------KTIFKHTVTVYNCIEMIGLCALVAEQWKNNNKCLNWRIVVDEMFRFIDPDMLEKIRTVLQERL........................................................................................ 182
5 -5.490IDP90217 gene: m003.1L; m003.1L, m3.1 MYXV_gp004 [Myxoma virus (strain Lausanne)]  ali follow..  20  4.......YVRRNEFGADDSVILAV-------QDYLRWSATPFRDRESA--GRLFAVFESFKRDAEIVFRDNVRW..................................................................................................................................................................................... 61
6 -5.160IDP06031 ribosomal protein L5, putative [Toxoplasma gondii ME49] XP_002369872 [Toxoplasma gondii ME49]  ali follow..  52VVRLTNKRIICQVVYSTIEGDRVLATAESTELPRYGVKIGLTNYAAAYCTGLLLARRVLKQLGMSETFEGVEATGEEYHIEENFGERRPFKVL----LDVGIVRTTVGNRVFGAMK---------------GAADLHVPHGIKKFPGYSKPEGEGEGSYDPEAHRARILGLHVADYMRQLKEEDPEKYSAQFSQYIKNK-IEADDIEAMYKNAAQIRKNPDAVKKERAANVQNVRQGNVIKTAKGQYVRHVK... 286
7 -5.120IDP06460 gene: N1R; N1R [Monkeypox virus Zaire-96-I-16] NP_536612 [Monkeypox virus Zaire-96-I-16]  ali follow..  14.......HATKDSLNTVTDVRHCL-------TEYILWVSHRWTHRESA--GPLYRLLISFRIDAMELFGSELKE..................................................................................................................................................................................... 71
8 -5.100IDP91661 gene: CCL21; C-C motif chemokine 21 precursor [Homo sapiens] NP_002980 [Homo sapiens]  ali follow..  37........................................................................................................................................QRKIPAKVVRSYRKQEPSLGCSIPAIL---------------------LPRKRSQAELCADPKELWVQQLMQHLDKTPSPQKPAQGCRKDRGASKTGKKGKGSKGCKRTERSQTP-KGP 134
9 -4.950IDP00531 gene: ccmD; putative heme exporter protein D YPO2737 [Yersinia pestis CO92]  ali follow..  19  48...........................................................................................................................................................................................................ADIHRRQAREQRIRQAQLNQTSMHQVPLH---QAPLHQAPLQQAPNLQEKRP 100
10 -4.780IDP05471 conserved domain protein [Bacillus anthracis str. Ames] BA_2159 [Bacillus anthracis str. Ames]  ali follow..  17  66.VDAGLGFIIDAKISVNDSYQYKV-HNSHGQVFYIT........................................................................................................................................................................................................................... 99

FFAS is supported by the NIH grant R01-GM087218-01
1 3 1 8 8 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.