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Query: PB044572 Q8A533_BACTN/1-343 PB044572; Pfam-B_44572;, from HGM_OVER

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MKRFPGRDMRSLTELVLGRDKFRTALCCSVVGMLLTLLFLSSCHYTRPDLTSEELSEKTKDSLNYLYDRHYTWNTNLEVTTDSVTMECLPIKDTYIALYKGDRVVVAEFAIHPADSVDSVWVKLAHTQEEQGWIRETELKESFVPTDSISQAIHFFSDTHASYFMIIFALFVGVYLFRAFRRKQLQLVYFNDIDSVYPLFLCLLMAFSATVYESMQVFVPDTWEHFYFNPTLSPFKVPFILSVFLLSIWLFLIVALAVLDDLFRQLTPAAAVFYLLGLMSSCIFCYFFFILMTHIYIGYLFLAFFIWVFAKKVHRNISYKYRCGHCGEKLKEKGICPHCGAINLast
1 -133.000PB044572 Q8A533_BACTN/1-343 PB044572; Pfam-B_44572;  ali  100  1MKRFPGRDMRSLTELVLGRDKFRTALCCSVVGMLLTLLFLSSCHYTRPDLTSEELSEKTKDSLNYLYDRHYTWNTNLEVTTDSVTMECLPIKDTYIALYKGDRVVVAEFAIHPADSVDSVWVKLAHTQEEQGWIRETELKESFVPTDSISQAIHFFSDTHASYFMIIFALFVGVYLFRAFRRKQLQLVYFNDIDSVYPLFLCLLMAFSATVYESMQVFVPDTWEHFYFNPTLSPFKVPFILSVFLLSIWLFLIVALAVLDDLFRQLTPAAAVFYLLGLMSSCIFCYFFFILMTHIYIGYLFLAFFIWVFAKKVHRNISYKYRCGHCGEKLKEKGICPHCGAIN 343
2 -4.770PB048631 gi|160885545|ref|ZP_02066548.1| hypothetical protein BACOVA_03545 [Bacteroides ovatus ATCC 8483]gi|156109167|gb|EDO10912.1| hypothetical protein BACOVA_03545 [Bacteroides ovatus ATCC 8483]  ali follow..  13  1.....................MKIKFLSFIASFFMVSFVITSCYSPDATIHAFALDTAGLGSYKFTIDQLSREIYNEDSLPVHADTIIDKILIKTLTTASGVVTMKDDSVININDSIDTIKVNVQHDPDSLRWNHVGKMQDEIIGEQKTIEFILTYSVVEGKNLKVYQNSNYSNW--TAAGTNTTGDLTSTLPNSILPLNGIILATANNKVYESTD----VAWTI...................................................................................................................... 241
3 -4.580PB064361 Q64PJ4_BACFR/1-580 PB064361; Pfam-B_64361;  ali follow..  1................MKIERLF------IYCLLAGTSLLASCNSEDMTDNPVETLSEGMYPLTFTAM-----GEVVATPQTRVSDYDDTDGKHKSKWDGGEVIGVSDGKPTTSTSNIPAYWQSTASQTVYGWYPNTADISLTGQDNTGNKFPYVLKGVSSK---------------QYSYKENVQLNLEHQLVK-----FRVKLNGDVPNLSDAKVFFYGYPTCKNEYGTVIPQGDKTYLAT---DYYTAMLAPDTKTSNNFVKIEVYGLTYYYNPDIELVKGTVYTYTVNK.................................................. 262
4 -4.020PB027498 Q7MTK6_PORGI/1-146 PB027498; Pfam-B_27498;  ali follow..  10  1......................MSNILILIIGVLVLGLVAALTEIRHSHKRRAAEAKGESLPEEPVRVVPPGCCGMHITCEKDSLLTAVSKSIVYYDDEELDRYAGVLPEEYNTEAVEEF-LSTLQEEEVPSWIRSLQMRQIQMPISIKEQALFIVSEHR....................................................................................................................................................................................... 140
5 -3.530PB006154 _JGI.0331794_ 2004021056 [Human Gut Community Subject 7]  ali follow..  2...........................................................................................................................................SYISVPRD--SKVMFNLTKRQLICFGMAVLIGVPSFFLMK-----------TVMKTNTAVMGMMVIMMPFFFLAPLEVILEHMIQAIFQRPKIRPYVTD......................................................................................................... 99
6 -3.220PB012823 Q5LCS8_BACFN/1-272 PB012823; Pfam-B_12823;  ali follow..  1........MHKIKQMI------------KYIATLLLTVLFVACNNGKGQQPSEENEDPAKEILQGIWLDDETETPLMRIIGDTIYYSDAQSAPVYFKI-LKDTLYTYGKDVTHYQIDYSFWFHSLADNIIKLHKSEDPNDTLAFSFKSVEIIPTYTEVTKKDSVVMFDGVRYRAYVYINPSQMKVVKTTYSEDGISMDNIYYDNVMHICVYEGKKSLYAKDITKQMFVDVIPTDFLQQAILSDMNFI--YHYQALVCIPES.................................................................................. 249
7 -3.200HGC00552 gi|162599220|dbj|BAAV01006262.1|2.0 TMP00636;  ali follow..  12  6.............................................................................................................................................................................................YKRLIVMLVVVLAITCLMATTAFAAVAGAVESTWSTASTQIKSVVDNVVFPAIDLILAVFFFAKLGTAYFEYRKS----GQFEWAAPAILFACLV----FTLTAPMYLWSII.......................................... 113
8 -3.090PB005346 A0R807_PELPD/1-258 PB005346; Pfam-B_5346;  ali follow..  12  2....................................................................................................................TDSLWAIDIKNQFHHNWMGMSQINQTTSGNFY-DQVLENFTDALDCLTAHL--MLECSEVLAGVKPANLISIVNRTRPCGRNLYLLLAQRLNNLNFMVLQSRQQSLLLLCYDHVRLEHHLSHPGIRTLLHKAGYKDDADCGMLLELRSRIGGNNSFPHEIGL-----------------FIGYPA.......................................... 181
9 -2.980HGC00024 gi|162813637|dbj|BABA01031072.1|2.0 TMP01508;  ali follow..  1................MKNIYNTLGMTKACLCALAVSLVTTGCSDLLDKEPPSAISDGSF-MLALTGCYRFQTGWSHDDFATPQGLLYLDFAGGNGTEKENFSTLMASSNTVATNSLRWYW------GNAYTQIAKYNTFLENITDCPMEKCLRAY-----FFLNLAFYYTDVPMPLKTLSVDEANSISQTPQTEVYSQVEKDLKTAIDLL.................................................................................................................................... 202
10 -2.920PB001708 Q3IRP6_NATPD/1-505 PB001708; Pfam-B_1708;  ali follow..  12  1...........................................................................................................................................MNEGIPE----QLIRRLSDASRLVPLALLAVVAAVIYV-------------------------------------WRPLFHGLIYRVAYSPSL--------LILVGTTVVAGIALVFWPRMGEDPLESAVTKWSI-LGTIVVAALVLSVAYSIPAGMAEERSLAQD...................................... 116

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ma H, Xiong H, Liu T, Zhang L, Godzik A., Zhang Z. Aggregate formation and synaptic abnormality induced by DSCR1. J Neurochem. 2004 Mar;88(6):1485-96.