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Query: HGC00106 gi|162841414|dbj|BABA01003295.1|1.0 TMP01000;, from HGM_OVER

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80
# Score Template Links and tools%idFirst LEDGDFVKLSNLTIGYTLPIRNNKYMKSLRVYVSGNNLFCITGYSGLDPELDISNVQAPGVEYRDTYPTTRSFTFGVNIGFLast
1 -6.660tr|B9ZVK6|B9ZVK6_HUMAN Uncharacterized protein OS=Homo sapiens GN=C10orf53 PE=4 SV=1 (Range: 1-77)  ali follow..  11  31......LQAVLAIDGHEVILEKIEDWNVVELMVNEEVIFHCNEFGKLTP................................ 77
2 -5.980sp|Q8IXX5|T183A_HUMAN Transmembrane protein 183A OS=Homo sapiens GN=TMEM183A PE=2 SV=2 (Range: 25-79)  ali follow..  13  2...........................KFRAHDACSGRVTVADYANSDPAVVRSGRVKKAV--ANAVQQEVKSLCGLEAS. 52
3 -5.700sp|Q9H3F6|BACD3_HUMAN BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 3 OS=Homo sapiens GN=KCTD10 PE=1 SV=1 (Range: 205-267)  ali follow..  14  15.QGRKIAEVCCTSIVYATEKKQKVEFPEARIYEETLNILLYEAQDGRGP................................ 63
4 -5.090sp|Q8WZ19|BACD1_HUMAN BTB/POZ domain-containing adapter for CUL3-mediated RhoA degradation protein 1 OS=Homo sapiens GN=KCTD13 PE=1 SV=1 (Range: 215-280)  ali follow..  16  15.QGRKIAEVCCTSIVYATEKKQKVEFPEARIFEETLNILIYETPRGPDPAL.............................. 65
5 -5.010sp|Q9H8H0|NOL11_HUMAN Nucleolar protein 11 OS=Homo sapiens GN=NOL11 PE=1 SV=1 (Range: 244-340)  ali follow..  14  39.ASKECLSVWNIKFQTLQTSKELPQGTSGQLWYYGEHLFMLHG...................................... 80
6 -4.930sp|Q6NUM6|TYW1B_HUMAN tRNA wybutosine-synthesizing protein 1 homolog B OS=Homo sapiens GN=TYW1B PE=2 SV=2 (Range: 607-668)  ali follow..  13  16.................................GGSKTFSAKDYMARTPHWALFGANERSFD................... 44
7 -4.900sp|Q9NV66|TYW1_HUMAN tRNA wybutosine-synthesizing protein 1 homolog OS=Homo sapiens GN=TYW1 PE=1 SV=2 (Range: 671-732)  ali follow..  17  16.................................GGSKTFSAKDYMARTPHWALFGASERGFD................... 44
8 -4.810sp|A6NHS7|MANS4_HUMAN MANSC domain-containing protein 4 OS=Homo sapiens GN=MANSC4 PE=4 SV=2 (Range: 111-244)  ali follow..  29  1..................................GTSAILYNITDGIDPDL.............................. 17
9 -4.700sp|Q14517|FAT1_HUMAN Protocadherin Fat 1 OS=Homo sapiens GN=FAT1 PE=1 SV=2 (Range: 4517-4588)  ali follow..  17  20...........................PMSVYASTASCSDVSACCEVESEVMMSD.......................... 47
10 -4.680sp|Q8WXX7|AUTS2_HUMAN Autism susceptibility gene 2 protein OS=Homo sapiens GN=AUTS2 PE=1 SV=1 (Range: 1019-1132)  ali follow..  13  8...........VGVTGIHPMNSISSLDRTRM---------MTPFMGISPLPGGERFPYPSFHWDPIRDPLRDPYRELDI.. 66

FFAS is supported by the NIH grant R01-GM087218-01
1 3 1 9 1 3   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.