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Query: HGC00248 gi|162576253|dbj|BAAV01029229.1|2.0 TMP00024;, from HGM_OVER

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120
# Score Template Links and tools%idFirst LSKEVNQEERAPRTVADVKEMLTKHSNGEIQRTIQNCITILQNDHVLADAIRLNLLSERIDIVKPVGWPRSGKTLNDTDMKYILRRMEKYGISSEKKIESAIRIVGNENPYHPIRDYLNGLLast
1 -6.410sp|Q2M3C7|SPKAP_HUMAN A-kinase anchor protein SPHKAP OS=Homo sapiens GN=SPHKAP PE=1 SV=1 (Range: 552-679)  ali follow..  20  64............................................................................................IAKGLLKEAALVLTRPNTYSSIGDFLDSM 92
2 -5.730tr|D6RE05|D6RE05_HUMAN Uncharacterized protein OS=Homo sapiens GN=MLIP PE=4 SV=1 (Range: 856-915)  ali follow..  25  1..........................................................................................GVIRPVPVKSRILLKKEEEVYNPFSKYLEDN 33
3 -5.700tr|A6NDT1|A6NDT1_HUMAN Uncharacterized protein OS=Homo sapiens GN=MLIP PE=4 SV=3 (Range: 232-290)  ali follow..  25  1..........................................................................................GVIRPVPVKSRILLKKEEEVYNPFSKYLEDN 33
4 -5.550sp|O60674|JAK2_HUMAN Tyrosine-protein kinase JAK2 OS=Homo sapiens GN=JAK2 PE=1 SV=2 (Range: 35-120)  ali follow..  14  26.............................................................................................GEYVAEEICIAASKACGITPVYHNMFAL 53
5 -5.520sp|P23458|JAK1_HUMAN Tyrosine-protein kinase JAK1 OS=Homo sapiens GN=JAK1 PE=1 SV=2 (Range: 37-120)  ali follow..  17  17.............................................................................................GEYTAEELCIRAAQACRISPLCHNLFAL 44
6 -4.950sp|Q8IWG1|WDR63_HUMAN WD repeat-containing protein 63 OS=Homo sapiens GN=WDR63 PE=2 SV=1 (Range: 38-126)  ali follow..  13  31...........................................................................................LINKEDIFEDLRNRAAVSDFHPVKKIVQEY 60
7 -4.910sp|Q8N2C7|UNC80_HUMAN Protein unc-80 homolog OS=Homo sapiens GN=UNC80 PE=2 SV=2 (Range: 767-872)  ali follow..  14  59................................................................................ENAQNCLTKLYKLDKMQFRQTMRDYVNKDSLNNVVDFLHAL 99
8 -4.850sp|Q70J99|UN13D_HUMAN Protein unc-13 homolog D OS=Homo sapiens GN=UNC13D PE=1 SV=1 (Range: 695-787)  ali follow..  10  7................................VVNDMEQLRLVIGKLPAQLAWEALEQRVGAVLE----------QGQLQNTLHAQLQSALAGLGHEIRTGVRTLAEQLE--GIAKHIQKL 84
9 -4.750sp|Q5SR76|CJ093_HUMAN TPR repeat-containing protein C10orf93 OS=Homo sapiens GN=C10orf93 PE=2 SV=2 (Range: 47-157)  ali follow..  34.....................................................TQFLGRAHLCRAQMCAPKSAENLEEFENCVTEYMKAINFAKGEPRYYFLVYNASVLYWQMVRPFLKP. 100
10 -4.550tr|C9JGX6|C9JGX6_HUMAN Uncharacterized protein OS=Homo sapiens GN=DENND3 PE=4 SV=1 (Range: 83-167)  ali follow..  20  24.................................................................................................VPFAVCVVSRFPYYNSLKDCLSWP 47

FFAS is supported by the NIH grant R01-GM087218-01
1 3 1 8 8 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Pio F, Chu Z, Reed JC, Godzik A. PAAD - a new protein domain associated with apoptosis, cancer and autoimmune diseases. Trends Biochem Sci. 2001 Feb;26(2):85-7.