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Query: HGC00422 gi|163631722|dbj|BABG01004545.1|2.0 TMP00397;, from HGM_OVER

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MIMNATDWNTALFEKMSDEQDKFRDWLKSQPPEEILHHTYEYTVREDIVMAMEQLELTDAQAQALLDSPTPLADVYRYFEKLETGHMDVIRDSIENRADDVCRAKEELRTTPIYPHSAAYAREHGELEQYRASNNVNRQCKESIEAAVREHFDGMYLSHDAAKGVIETYGMERVSMVLSNTVQLQDWDGRYSRRNKEWAKTIPNDNPETVRCGYALNSHPAVLDGFIDLVREEQQRSRTQREKLEPSRPSVRDKLKQELPAHKSAAPKKREPERLast
1 -6.390sp|Q68CP9|ARID2_HUMAN AT-rich interactive domain-containing protein 2 OS=Homo sapiens GN=ARID2 PE=1 SV=2 (Range: 124-277)  ali follow..  3..........................................................................................................................................AIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGL----------PNEVDFAINVCTLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEEWKEKTDR.................... 108
2 -5.580sp|P42356|PI4KA_HUMAN Phosphatidylinositol 4-kinase alpha OS=Homo sapiens GN=PI4KA PE=1 SV=3 (Range: 370-463)  ali follow..  11  1..............................................................................................................................LSPLKLRCQANAACVDLMVWAVKDEQGAENLCIKLSEKLQSKTSSKVIIAHLPLLICCLQGLGRLCERFPVVVHSVT-----PSLRDFLVIPSPVLVK.................................................. 93
3 -5.450tr|C9JSP7|C9JSP7_HUMAN Uncharacterized protein OS=Homo sapiens GN=BPIFB1 PE=4 SV=1 (Range: 49-158)  ali follow..  19  30......YLGAKLLDSQGKVTKWFNNSAASLTMPTLDNIPFSLIVSQDVVKAAVAAVLSPEEFMVLLDS.............................................................................................................................................................................................................. 91
4 -5.390sp|Q8IWZ3|ANKH1_HUMAN Ankyrin repeat and KH domain-containing protein 1 OS=Homo sapiens GN=ANKHD1 PE=1 SV=1 (Range: 1797-1893)  ali follow..  13  27...................................................................................................................................STFQPANKLNKNVPTNVRSSF-----------SLPLAYPHPHFALLAAQTMQQAQFGGTFSPSPNTWG........................................................................... 93
5 -4.530tr|C9JXP6|C9JXP6_HUMAN Uncharacterized protein OS=Homo sapiens GN=INTS6 PE=4 SV=1 (Range: 1-89)  ali follow..  16  2..................................................................................................................................NELKNLQAEGLTTLGQSLRTAFD---LNLNRLVTGIDNYGQGRNPFFLEPAIIITITDGSKLTTTSGVQDEVSCA..................................................................... 74
6 -4.320tr|E2QRG0|E2QRG0_HUMAN Uncharacterized protein OS=Homo sapiens GN=MAP3K6 PE=4 SV=1 (Range: 1-104)  ali follow..  12  7LRAETDRLREILAGK-EREYQALVQRALQRLNEEA-EPPTALSTDQGLVQWLQELNVDSGTIQMGRDGMPHLEGHLGTASRIH............................................................................................................................................................................................... 94
7 -4.220sp|Q92624|APBP2_HUMAN Amyloid protein-binding protein 2 OS=Homo sapiens GN=APPBP2 PE=1 SV=2 (Range: 1-123)  ali follow..  6LEWIPETLYNTAISAVVDNYIRSRRDIRSLPENIQFDVYYKLYQQGRLCQLGSEFC-ELEVFAKVLRALDLLHHCFQALMDHGVKVASVLAYSFSRRCSYIAESDAA....................................................................................................................................................................... 114
8 -4.190sp|Q6UWF9|F180A_HUMAN Protein FAM180A OS=Homo sapiens GN=FAM180A PE=2 SV=1 (Range: 67-173)  ali follow..  16  10..........................................................................................................................KDEELASLRKASDFRTVCNNVIPKSIPD-IRRLSASLSSHPGILKKEDFERTVLTLAYTAYRTALSH--GHQKDIWAQSL........................................................................ 86
9 -4.150sp|Q99575|POP1_HUMAN Ribonucleases P/MRP protein subunit POP1 OS=Homo sapiens GN=POP1 PE=1 SV=2 (Range: 258-351)  ali follow..  16  2............................................................................................................................................EEEILKALSGMCNIDTGLTFAAVHCLS--GKRQGSLVLYRVNKYPR--EMLGPVTFIWKSQRTPGDPSESRQLW-IWLHPTLKQDILEEIKAACQCVE.................................... 94
10 -4.000sp|Q9HCE0|EPG5_HUMAN Ectopic P granules protein 5 homolog OS=Homo sapiens GN=EPG5 PE=2 SV=2 (Range: 431-530)  ali follow..  11  2..........................................................................................................................................................................LKECISVLFMFTRRVNEDTQFHDDILLWLQKLVS-----LQRVGCPGDHLFLLNHILR.............................................. 55

FFAS is supported by the NIH grant R01-GM087218-01
1 3 1 9 1 3   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Database searching by flexible protein structure alignment. Protein Sci. 2004 Jul;13(7):1841-50.