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Query: HGC00857 gi|162620543|dbj|BAAW01002606.1|2.0 TMP01139;, from HGM_OVER

Results of FFAS03 search in VFDB
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MLNFHSKKVMCIQQEIYARMIMYNFVQMITSHVVIVKKQRKHTYKANFSVATHMCRLFYREKTTSPNLETIIAKNLIPIRPDRHRERNLKVKTFHGFLYRVALast
1 -12.700[L] COG3385 FOG: Transposase and inactivated derivatives  ali follow..  14  304IRKFLGNNDNAIRLQIFAAMIAYALLRIAARLARV---------PLPILRFTDLVTQCLFQRKSIAEIHK---------PPQVNPSRPKPRTIPNQMVFRYA 387
2 -7.140[L] COG5558 Transposase  ali follow..  292.WLIRQRREDRREMALFAVGLWHNVFAVRVVR...................................................................... 322
3 -5.280[S] COG3152 Predicted membrane protein  ali follow..  9..SFQGRIG---RQAFWLWNICYYAMIAGFAMGSNLLFPDVAHLILPVFLLVVLVPDLAITAKRWHDR.................................. 71
4 -4.990[PT] KOG3676 Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family)  ali follow..  648LEFTENYDFKAVFIVILTYILLLNMLIALMGETVNKAQESKNIWKLQRAITILDTEKSF........................................... 713
5 -4.880[E] COG4177 ABC-type branched-chain amino acid transport system, permease component  ali follow..  10.DSVATPTQRALKEAFYAGAIALGLFVLFIGLKTGQNMSN----ELVLTQRWGLLAAVVIATAVGRFLYVAYGQPFMANQK..................... 85
6 -4.650[R] KOG3175 Protein phosphatase 4 regulatory subunit 2 related protein  ali follow..  10  10LKDFEKRGKKEVCPVLWSQFFIFKLEKVMTSAPEPRGPPNPNVEYIPFDEMKERILKIVTGFNGIPFTIQRLCELLT--DPRRNYTGTDK............ 120
7 -4.170[U] KOG3103 Rab GTPase interacting factor, Golgi membrane protein  ali follow..  117LNPLRGTDQQILQDDMAGPLVFCLTLGGFLLLSGKVTFSYIYGIGVMGCIFFYCLLSLMVSRSQVTAVASVLGYCLLPM....................... 198
8 -4.140[I] KOG3059 N-acetylglucosaminyltransferase complex, subunit PIG-C/GPI2, required for phosphatidylinositol biosynthesis  ali follow..  13  137...LKTLTESVSTDTIYAMSVFMLLGHLIFFDYGANAAIVSSTLSLNMAIFASVC............................................... 188
9 -4.110[O] KOG2903 Predicted glutathione S-transferase  ali follow..  274...AIGDTLTEADVRLYPTIVRFDVVYHQHFKCNLATIRDDYSRIHTWLKNIYWRHEAFQRTTDFTHIKLGYTRSQPRVNPIGITP................ 356
10 -4.110[E] KOG1368 Threonine aldolase  ali follow..  16  460.....GTKPNLIWRNRNASSFLFNLLNIVV........................................................................ 484

FFAS is supported by the NIH grant R01-GM087218-01
1 3 3 2 5 8   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Grynberg M, Jaroszewski L, Godzik A. Domain analysis of the tubulin cofactor system: a model for tubulin folding and dimerization. BMC Bioinformatics. 2003 Oct 10;4(1):46.