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Query: TM0015 TM0015 281896 PDB-2007-09-14, from JCSG0516

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MPVAKKYFEIRWHGRAGQGAKSASQMLAEAALEAGKYVQAFPEYGAERTGAPMRAFNRIGDEYIRVRSAVENPDVVVVIDETLLSPAIVEGLSEDGILLVNTVKDFEFVRKKTGFNGKICVVDATDIALQEIKRGIPNTPMLGALVRVTGIVPLEAIEKRIEKMFGKKFPQEVIDANKRALRRGYEEVKCSELast
1 -8.690sp|Q9P0Z9|SOX_HUMAN Peroxisomal sarcosine oxidase OS=Homo sapiens GN=PIPOX PE=2 SV=2  ali follow..  11  1MAAQKDLWDAIVIGAGIQGCFTAYHL-----AKHRKRILLLEQFFLPHSRGSSHGQSRIIRKAYLEDFYTRMMHECYQIWAQLEHEAGTQLHRQTGLLLLENQELKTIQANLSRQRVEHQCLSSEELKQRFPNIRLPR--EVGLLDNSGGVIYAYKALRALQDAIRQLGGIVRDGEKVVEINPG........ 181
2 -7.000sp|Q96HY7|DHTK1_HUMAN Probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, mitochondrial OS=Homo sapiens GN=DHTKD1 PE=2 SV=2  ali   12  23....DRVICLQVHGFCGQGIVP-----------ETFTLSNLPHF---RIGGSVHLIVNYTTPAERGRSSLYCSDIGKLVGCAIIHVN------DSPEEVVRATRLAFEYQRQFRKDVIIDLLCYRQWGHNELDEPFYTNPIMYKIIRARKSIPDTYAEHLIAGLMTQEEVSEIKSSYYAKLNDHLNNMAHYR 199
3 -6.890sp|Q8N2E6|TOR2X_HUMAN(removed signalp:1-26) Prosalusin OS=Homo sapiens GN=TOR2A PE=1 SV=1  ali follow..  16  58....TKPLVLSLHGWTGTGKSYVSSLLAHYLFQGGLRSPRVHHFSPKDLKSWVQGNLTACGRSLFLFDEMDKPGLMEVLRPFLGSSWVVYGTNYRKAIFIWLLKLGHHGRAPPRRSGALPPAPAARPALRAQRAGPAGPGAKG................................................. 216
4 -6.880sp|Q9NXH8|CI167_HUMAN Torsin family protein C9orf167 OS=Homo sapiens GN=C9orf167 PE=1 SV=2  ali follow..  14  185....SRPLLLALHGPSGVGKSHVGRLLARHFRSVLEDSALVLQYHARHH--PEARAAQDCREELAARAEAEEKTPLLVLDDELMPRPLLDELHG----FLQPQRSHH----------NAIYVLLSGAGGAEVTRFVLQNASRALPLRPDGFRSAEAAAAQAEEDLRASLLAVLSREH............... 352
5 -6.720sp|Q6PL18|ATAD2_HUMAN ATPase family AAA domain-containing protein 2 OS=Homo sapiens GN=ATAD2 PE=1 SV=1  ali   16  13.........CLFYGPPGTGKTLVARALANECSQGDKRVAFFMRKGADYQMRPSIIFFDEIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDS--RGEIVVIGATNRLDSIDPALRRPGRFDREFLFSLPDKEARKEILK-IHTRDWNPKPLDTFLEELAENCVGYCGADIKSICAEAALCALRRRYPQIYTTS 212
6 -6.690sp|Q9ULD0|OGDHL_HUMAN(removed signalp:1-15) 2-oxoglutarate dehydrogenase-like, mitochondrial OS=Homo sapiens GN=OGDHL PE=2 SV=3  ali   16  73....KKVMSILVHGFAGQGVV-----------YETFHLSDLPSY---TTNGTVHVVVNFTTDPRMARSSPYPTDVARVVNAPIFHVN-----ADDPEAVIYVCSVAAEWRNTFNKDVVVDLVCYRRRGHNEMDEPMFTQPLMYKQIHRQVPVLKKYADKLIAETVTLQEFEEEIAKYDRICEEAYGRSKDKK 249
7 -6.630sp|O14727|APAF_HUMAN Apoptotic protease-activating factor 1 OS=Homo sapiens GN=APAF1 PE=1 SV=2  ali   13  141SKLKGEPGWVTIHGMAGCGSVLAAEAVRDHSLLEGCFPGGV-SVGKQDKSGLLMKLQNLAKDRLRILMLRKHPRSLLILDD-VWDSWVLKAFDSQCQILLTTR......................................................................................... 265
8 -6.470sp|O14656|TOR1A_HUMAN(removed signalp:1-20) Torsin-1A OS=Homo sapiens GN=TOR1A PE=1 SV=1  ali follow..  13  73....KKPLTLSLHGWTGTGKNFVSKIIAENIYEGGLNSDYVHLFVATLHFPHASNITLYKDQ-IRGNVSACARSIFIFDEMDKMHAGLIDAIKP----FLDYYDLVDGVSYQ-----KAMFIFLSNAGAERITDVALDFWRSGKQREDIKLKDIEHALSVFNNKNSGFWHSSLIDRNL.............. 242
9 -6.400sp|O14727|APAF_HUMAN Apoptotic protease-activating factor 1 OS=Homo sapiens GN=APAF1 PE=1 SV=2  ali   15  2...........IHGMAGCGSVLAAEAVRDHSLLEGCFPGGV-SVGKQDKSGLLMKLQNLAKDRLRILMLRKHPRSLLILDD-VWDSWVLKAFDSQCQILLTTRDKSEILSLFVNMKKADLPEQAHSIIKECKGSPLV-VSLIGALLRDFP--RWEYYLKQLQNKQFKRIRKS-YEALDEAMSISVEMLRED. 228
10 -6.310sp|Q5JU69|TOR2A_HUMAN(removed signalp:1-26) Torsin-2A OS=Homo sapiens GN=TOR2A PE=2 SV=1  ali follow..  14  58....TKPLVLSLHGWTGTGKSYVSSLLAHYLFQGGLRSPRVHHF-KKDLKSWVQGNLTACGRSLFLFDEMDKPGLMEVLRPFLGSSWVVYGTNYRKAIFIFISNTGGKQINQVALEAWRSRRDREEILLQELEPVISRAVL-RLLDAVVPFLPLQ--RHHVRHCVLNELAQLGLEPRDEVVQAVLDST.... 269

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Comparative analysis of protein domain organization. Genome Res. 2004 Mar;14(3):343-53.