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Query: TM0006 TM0006 281887 Diffraction|HSQC-2004-07-13, from JCSG0516

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MSRIVNVKLSLKRYEYEKPFHITGSVSSESRNVEVEIVLESGVKGYGEASPSFRVNGERVEALLAIENAVREMITGIDVRNYARIFEITDRLFGFPSLKAAVQFATLDALSQELGTQVCYLLGGKRDEIETDKTVGIDTVENRVKEAKKIFEEGFRVIKIKVGENLKEDIEAVEEIAKVTRGAKYIVDANMGYTQKEAVEFARAVYQKGIDIAVYEQPVRREDIEGLKFVRFHSPFPVAADESARTKFDVMRLVKEEAVDYVNIKLMKSGISDALAIVEIAESSGLKLMIGCMGESSLGINQSVHFALGTGAFEFHDLDSHLMLKEEVFRGKFIQDGPRMRVKDQLast
1 -5.470sp|Q96F46|I17RA_HUMAN Interleukin-17 receptor A OS=Homo sapiens GN=IL17RA PE=1 SV=2 (Range: 536-643)  ali follow..  12  22...........................................................................................................................................................NYLRSPGGRQLRAALDRFRDWQVRCPD----------WFECENLYSADDQDAPSLDEEVFEEPL------------------LPPGTGIVKRAPLVREPGSQACLAIDPLVGEEG........................................................................... 108
2 -4.860sp|Q659A1|NARG2_HUMAN NMDA receptor-regulated protein 2 OS=Homo sapiens GN=NARG2 PE=1 SV=2 (Range: 262-372)  ali follow..  1....................................................................................................................................................................DISKDPNAEKLVSRYHPQIALTSQSKEQWEIPVCIQVIPVAGSKPVKVIYINSPLPQKKMTMRERNQIFHEVPLKFMMSKNTSVPVSAVFMDKPEEFIS.................................................................................. 111
3 -4.850sp|Q9Y6V0|PCLO_HUMAN Protein piccolo OS=Homo sapiens GN=PCLO PE=1 SV=4 (Range: 1933-2002)  ali follow..  17  1....................................................................................................................................................................................................DPMQKITDLQKEFYELESLHSVVPQEDIVSSSFIIPESHEIVDLGTMVTSTEEERKLLDADAA-----ELMK............................................................................. 69
4 -4.480tr|E7EWK8|E7EWK8_HUMAN Uncharacterized protein OS=Homo sapiens GN=PLOD1 PE=4 SV=2 (Range: 19-216)  ali follow..  12  13....................................................................................................................................LTVATKETEGFRRFKRSAQFFNYKIQALGLGEDWNVEKKALEKHADKEDLVILFADSYDVLFASGPRELLKKFRQARSQVVFSAEE............................................................................................................................... 112
5 -4.450sp|Q9UKZ4|TEN1_HUMAN Teneurin-1 OS=Homo sapiens GN=ODZ1 PE=1 SV=2 (Range: 2519-2725)  ali follow..  12  4.............................................FGKGIKFAIKDGIVTADIIGVANEDSRRLAAINAHYLENLHFTIEGRDTHYFIKLGSLEEDLVLIGNTGGR---RILENGVNVTVSQMTSVLNGRTRRFADIQ--LQHGALCFNIRYGTTVEEEKNHVRAVAQAWTKEQRRLEGIRAWTEGEKQQLLSTGRVQGYD-SVEQYLELSDSANNIHFMRQS................................................................................................................ 202
6 -4.440sp|O60291|MGRN1_HUMAN E3 ubiquitin-protein ligase MGRN1 OS=Homo sapiens GN=MGRN1 PE=1 SV=2 (Range: 23-255)  ali follow..  50............................................................................................................................YVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDADSPTEDGDKPRVLYSLEFTFDADARVAITIGRAVYSPKSPSLQSETVHYKRGVSQQFSLPDFSEWKDDELNFDLDRGVFPVVIVEVTGHAHVLLAAFEKHMDGSFSVKPLKQKQIVDRVSYLLQEIYG............................................................ 233
7 -4.350sp|A4D126|ISPD_HUMAN 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase-like protein OS=Homo sapiens GN=ISPD PE=3 SV=2 (Range: 299-376)  ali follow..  10......................................................................................................................................................................................................................................SELNHVKVTSEALGHAGRHLQQIILDQCYNFVCVNVTTSDFQETQKLLSMLEESSLCILYPVVV................................................... 73
8 -4.210sp|Q6N022|TEN4_HUMAN Teneurin-4 OS=Homo sapiens GN=ODZ4 PE=2 SV=2 (Range: 2564-2769)  ali follow..  14  3.............................................FGKGVKFALKDGRVTTDIISVANE--------DGRRVAAILNHAHYLENLHFTIDGVDTHYFVKPGPSEGDLAILGLSGGRRTLENGVNVTVSQINRTRRYTDIQLQYGALCLNTRYGTTLDEEKARVRAVRQAWAREQQRLEGLRAWTEGEKQQVLSTGRVQGYD-SVEQYPELSDSANNIHFMRQS................................................................................................................ 201
9 -4.160sp|Q9ULL8|SHRM4_HUMAN Protein Shroom4 OS=Homo sapiens GN=SHROOM4 PE=1 SV=3 (Range: 858-940)  ali follow..  2..........................................................................................................................................................................................................ECFASKGLENSMCCKPLHCGDFDYHRTCSYSCSVALVHDPCIYCSGEICPALLKR........................................................................................ 58
10 -4.150tr|E9PDQ0|E9PDQ0_HUMAN Uncharacterized protein OS=Homo sapiens GN=CNKSR3 PE=4 SV=1 (Range: 1-104)  ali follow..  19  20................................................................................................................................................................GLGMYIKSTYDGLHVITGTTENV--------GWQLKNLVKKLRE-NPTGVVLLLKKRPTG............................................................................................................................. 70

FFAS is supported by the NIH grant R01-GM087218-01
1 2 7 8 2 4   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Rychlewski L, Zhang B, Godzik A. Fold predictions for bacterial genomes. J Struct Biol. 2001 May-Jun;134(2-3):219-31. Review.