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Query: TM0009 TM0009 281890 Purified-2001-02-14, from JCSG0516

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MIGPRDLLNIALRIESTGYSYYKNLTEKTEGETKALFERLAEQERDHSRKFKEILEKYEQDLNPSDEVLGYLEALAEISIFPKLEETPPDDLREAVRRAIEVEKDSIVFYSEILSYVPEKEPVQTIIDEEKKHLRDLLRLEVLast
1 -5.880sp|Q63HK5|TSH3_HUMAN Teashirt homolog 3 OS=Homo sapiens GN=TSHZ3 PE=1 SV=2 (Range: 902-975)  ali follow..  14  8...........................................................................................................QFAASLRQTSEGKYIMSDLSPQERMHISRFTGLSM 42
2 -5.880sp|Q6ZSZ6|TSH1_HUMAN Teashirt homolog 1 OS=Homo sapiens GN=TSHZ1 PE=2 SV=2 (Range: 896-968)  ali follow..  17  8...........................................................................................................QFASSLRETTEGKYIMSDLGPQERVHISKFTGLSM 42
3 -5.850sp|Q9NRE2|TSH2_HUMAN Teashirt homolog 2 OS=Homo sapiens GN=TSHZ2 PE=1 SV=3 (Range: 852-924)  ali follow..  14  8...........................................................................................................QFASSLFQTSEGKYLLSDLGPQERMQISKFTGLSM 42
4 -5.270sp|Q9H4H8|FA83D_HUMAN Protein FAM83D OS=Homo sapiens GN=FAM83D PE=1 SV=3 (Range: 494-585)  ali follow..  13  24.............................ELYLSDSLRNLNKERQFHFAGIRSRLNHM.................................................................................... 52
5 -4.900sp|Q9NU22|MDN1_HUMAN Midasin OS=Homo sapiens GN=MDN1 PE=1 SV=2 (Range: 2301-2480)  ali follow..  13  2............AMRNRGLEIYGDASTPDNLDLKVLLHSLGLVGNSVCDILLALHTETRSTVVGSPTSS--VSTLIQTAILIVQYLQRGLSLDRAFSEACW------EVYVCSQHSPANRKLVQALLEKHVSSLRAHET... 124
6 -4.850sp|Q8N201|INT1_HUMAN Integrator complex subunit 1 OS=Homo sapiens GN=INTS1 PE=1 SV=2 (Range: 431-550)  ali follow..  12  7..NLGTTIKLVIFNELSSARALQHSSELAPKFLAMVFQDLLTNKDDYLRASRALLREI.................................................................................... 72
7 -4.810sp|Q8N7L0|CM030_HUMAN Uncharacterized protein C13orf30 OS=Homo sapiens GN=C13orf30 PE=2 SV=1 (Range: 1-88)  ali follow..  21...............................................................................................................RVPPSIYDTSLLKALNQGQQRYFYSIMRIY. 50
8 -4.790tr|C9J713|C9J713_HUMAN Uncharacterized protein OS=Homo sapiens GN=RSRC1 PE=4 SV=1 (Range: 218-283)  ali follow..  16  4..TLVEQVKRVKEIEAIESDSFVQQTFRSSKEVKKLFIEKADAEEKWFKRLIALRQE..................................................................................... 58
9 -4.790sp|Q5TG08|YV009_HUMAN Putative uncharacterized protein LOC388900 OS=Homo sapiens PE=1 SV=2 (Range: 411-510)  ali follow..  17  50..TYTDVISETLCSMKKRKDNLNQLYQHHWTEWNYFDKHLKELQDNFSREMKN......................................................................................... 100
10 -4.670sp|Q502W7|CCD38_HUMAN Coiled-coil domain-containing protein 38 OS=Homo sapiens GN=CCDC38 PE=2 SV=1 (Range: 318-477)  ali follow..  11  21..EPEELLQVLRELEEQNLTLFQYSQDVDEEEVNKREKVIQDKTNSNIEFLLEQEKMLKANCVREEEKAAELQLKSKLFSFGEFNSDAQEILIDSLSKKIT------QVYKVCIGDAEDDGLIQKLVKVESRLVELCDLI.. 156

FFAS is supported by the NIH grant R01-GM087218-01
1 2 4 1 8 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Sasin JM, Godzik A, Bujnicki JM. SURF'S UP! - protein classification by surface comparisons. J Biosci. 2007 Jan;32(1):97-100.