current user: public

Please be advised that we have recently moved our server to a new location. We tried our best to fully test all functions on the website, but if something does not work for you please let us know.

Query: TM0010 TM0010 281891 Purified-2005-03-03, from JCSG0516

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .   80    .   90    .  100    .  110    .  120    .  130    .  140    .  150    .  160    .  170    .  180    .  190    .  200    .  210    .  220    .  230    .  240    .  250    .  260    .  270    .  280    .  290    .  300    .  310    .  320    .  330    .  340    .  350    .  360    .  370    .  380    .  390    .  400    .  410    .  420    .  430    .  440    .  450    .  460    .  470    .  480    .  490    .  500    .  510    .  520    .  530    .  540    .  550    .  560    .  570    .  580    .  590    .  600    .
# Score Template Links and tools%idFirst MPLTTNTILICAGGACISAGEKSVKDAFEEELRKYGLDEVVRVIETGCMGACTLGPIAVIYPESVFYQKLTPDAAREIVEEHILKGRIVEKYLYKASEGKPVPRVHEEVPFFKKQVRIVTRNLGVIDPTKIEEYIARDGYFALAKALQMKPEDVIKEIKDSGLRGRGGAGFPTGLKWELAARQKAEKKFVVCNADEGDPGAFMDRSVLEGDPHAVIEGMAIAAYAIGAQKGFVYVRAEYPLAIERLNIALNQAREYGFLGGNIMGTDFSFDIEIRIGAGAFVCGEETALMASIEGERGQPKVKPPYPVEKGLWGYPTVINNVETLANVPWIIRNGAKEFRKYGTENSPGTKVFALAGKVKNTGLVEVPMGITLRELIYEIGGGIAGDKKLKAIQTGGPSGGCIPAEYVDTPVDFESLQKLGAIMGSGGMIVMDEDDCMVDVARFFLEFTVEESCGKCTPCREGTKKMLEILEKITSGEGTEEDIEELEKLAHVVKDTSLCGLGQTAPNPVLSTLRYFRDEYLAHVKEKRCPSKKCKALISYVIDPEKCVGCTACARVCPVQCISGQVRQPHVIDQAECVRCGSCIEVCRFGAISKVTPALPVEEAVELast
1 -5.430sp|Q6N043|Z280D_HUMAN Zinc finger protein 280D OS=Homo sapiens GN=ZNF280D PE=1 SV=3 (Range: 618-723)  ali follow..  13  11...................................................................................................................................................................................................................................................................................................................................................................................................................................................ECCSEIKDFANHFPTYVHCSFCRYNTSCSKAYVNHMMSFHSNRPSKRFCIFKKHSENLRGITLVC-------NCDFLSDVSGLDNMATHLSQ--HKTHTCQVVM.................................................................... 106
2 -5.080sp|Q8ND82|Z280C_HUMAN Zinc finger protein 280C OS=Homo sapiens GN=ZNF280C PE=1 SV=1 (Range: 611-716)  ali follow..  12  13...................................................................................................................................................................................................................................................................................................................................................................................................................................................ECHSKIKDFASHFSIYIHCSFCKYNTNCNKAFVNHMMSSHSNHPGKRFCIFKKHSGTLRGITLVC------LKCDFLADSSGLDRMAKHLS--QRKTHTCQ....................................................................... 105
3 -5.050sp|O75592|MYCB2_HUMAN Probable E3 ubiquitin-protein ligase MYCBP2 OS=Homo sapiens GN=MYCBP2 PE=1 SV=3 (Range: 4233-4375)  ali follow..  11  9..................................................................................................................................................................................................................................................................................................................................................................................................................................................................GNLCTDCDRFLHLHRRTKTHQRQVFKEEEEAIKVD-LHEGCGRTKLFWLMALADSKTMKAMVEFREHTGKPTT---ELSAVGSVCSDADCQEYAKIACSKTHPCGHPCG--GVKNEE------------HCLPCLHGC................... 143
4 -4.800sp|Q96DY7|MTBP_HUMAN Mdm2-binding protein OS=Homo sapiens GN=MTBP PE=1 SV=1 (Range: 43-120)  ali follow..  17  1.......................................................................................................................................AANVYHLLKRSISASINPEDSTFPACSV-----GGIPGSKKWFFAVQA-----YQFCSSDWQEIHFDTEKDKIEDVLQTNIE...................................................................................................................................................................................................................................................................................................................................................................................................... 76
5 -4.440sp|P51790|CLCN3_HUMAN H(+)/Cl(-) exchange transporter 3 OS=Homo sapiens GN=CLCN3 PE=1 SV=2 (Range: 1-94)  ali follow..  18  1...........................................................................................................................................................................................................................................................................................................................................................................................................................MESEQLFHRGYYRNSNSITSASSDEELLDGAGVIMDFQTSEDDNLLDG--NSSTHLLDLLDEPIPGVGTYDDFHTIDWV..................................................................................................................... 94
6 -4.240sp|Q9H2P0|ADNP_HUMAN Activity-dependent neuroprotector homeobox protein OS=Homo sapiens GN=ADNP PE=1 SV=1 (Range: 446-529)  ali follow..  19  2..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................KICTICN-------ELFPENVYSVHFEKEHKAEKVPAVANYIMKIH-----NFTSKCLYCNRYLPTDTLLNHML----IHGLSCPYCRSTFND.................... 78
7 -4.080sp|Q9H6K1|CF106_HUMAN Uncharacterized protein C6orf106 OS=Homo sapiens GN=C6orf106 PE=1 SV=2 (Range: 65-182)  ali follow..  18  22......................................................................................................................................................................................................................................................................................................................................................GESIPPDTQ-FVKTWRIQNSGAEAWPPGVCLK-----VGGDQFGHVNMVMVRSLEPQEIADVSVQMCSPSRAGMYQGQWRMCTATGLYYGDVIWVILSVEV.................................................................................................................................................................... 117
8 -4.030sp|Q86VP1|TAXB1_HUMAN Tax1-binding protein 1 OS=Homo sapiens GN=TAX1BP1 PE=1 SV=2 (Range: 717-789)  ali follow..  11  7...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................SFDVHKKCPLCELMFPPNYDQSKFEEHVESHWKVCPMCSEQFPP.................... 50
9 -3.840sp|O75592|MYCB2_HUMAN Probable E3 ubiquitin-protein ligase MYCBP2 OS=Homo sapiens GN=MYCBP2 PE=1 SV=3 (Range: 4468-4587)  ali follow..  18  4...........................................................................................................................................................................................................................................................................................................................................................................................................................LEYEGLHKSEAITTPGVRFYNDPAGYAMNRYAYYV-------CYKCRKAYFGGEARCD---AEAGRGDDYDPRELICGACSDVSRAQMC------------------PKHGTDFLEYKC--RYCCSVAVFF-----CFGTTHFCNAC................................................. 115
10 -3.820sp|Q7Z739|YTHD3_HUMAN YTH domain family protein 3 OS=Homo sapiens GN=YTHDF3 PE=1 SV=1 (Range: 65-124)  ali follow..  18  7..................................................................................................................................................................................................................................................................LGEAAWSTAGDQPMPYLTTYGQMSNGEHHYIPDGVFSQPGALGNTPPFLGQHGF....................................................................................................................................................................................................................................................................................................... 60

FFAS is supported by the NIH grant R01-GM087218-01
1 2 7 8 2 4   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Rychlewski L, Zhang B, Godzik A. Fold predictions for bacterial genomes. J Struct Biol. 2001 May-Jun;134(2-3):219-31. Review.