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Query: TM0011 TM0011 281892 Purified-2004-02-02, from JCSG0516

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MRMAKVKSLEELMKIKEQALKDLQLRGETGKRGKITVAMGTCGIAAGAKETLKAIVEALNEYNINDIAVVQSGCMGLCEVEPTVEVRLEGQEPVIYGRVTPENAKRIVKMHILEGRVVEDLVVKRGEALast
1 -7.880sp|Q2QL34|MP17L_HUMAN Mpv17-like protein OS=Homo sapiens GN=MPV17L PE=1 SV=1 (Range: 1-104)  ali follow..  11  13..............................RRHPWPTNVLLYGSLVSAGDA---LQQRLQGREANWRQTRRVATLVVTFHANFNYVWLRLLERALPGRAPHALLAKLLCDQVVGAPIAVSAFY..... 102
2 -6.060sp|A6NNL5|CO061_HUMAN Uncharacterized protein C15orf61 OS=Homo sapiens GN=C15orf61 PE=2 SV=2 (Range: 1-157)  ali follow..  21  75................................................................ANYHVLRTGCFPFCSKAPALKVVNLGIPTLLYGLGSWLFARVTETVHTSYGPITVYFLNKEDEG 154
3 -5.770tr|F8WBB3|F8WBB3_HUMAN Uncharacterized protein OS=Homo sapiens GN=ABHD1 PE=4 SV=1 (Range: 22-102)  ali follow..  33..........................PDPTTQPIVLLLPGITG--SSQDTYVLHLVNQALRDGYQPTGLFVPAILKI................................................... 81
4 -5.770sp|Q86UK0|ABCAC_HUMAN ATP-binding cassette sub-family A member 12 OS=Homo sapiens GN=ABCA12 PE=1 SV=3 (Range: 1577-1664)  ali follow..  11  8LNANAVCDTMAVTAMIQSHLPEAYLKEDIGGELVYVLPPFSTKVSGAYLSLLRALDNGMGDLNIGCYGISDT........................................................ 79
5 -5.220sp|Q9C091|GRB1L_HUMAN GREB1-like protein OS=Homo sapiens GN=GREB1L PE=2 SV=2 (Range: 381-625)  ali follow..  17  84LGPDQVPLREEFEQIMLKAMQEFTLREASVSQDLVHVVVTQNSLAEGISETLRTLSEMRHYQRLPDYVVVICASKIRGNEFCVVVLGQHQSRALAESMLTTSEFLKEISYELITGKV........... 224
6 -4.830sp|B3GLJ2|PATE3_HUMAN Prostate and testis expressed protein 3 OS=Homo sapiens GN=PATE3 PE=2 SV=1 (Range: 28-98)  ali follow..  17  2............................RTRTDRCRRGFGVCTAQKGEACMLLRIYQR------NTLQISYMVCQKFCR................................................. 46
7 -4.350sp|Q69YJ1|PKHMP_HUMAN Putative pleckstrin homology domain-containing family M member 1P OS=Homo sapiens GN=PLEKHM1P PE=5 SV=1 (Range: 263-320)  ali follow..  21  18............................................TRENGFLLQYLVAIPMEKGLDSQGCFCAGCIGFSFVRP.............................................. 58
8 -4.350sp|Q9Y4G2|PKHM1_HUMAN Pleckstrin homology domain-containing family M member 1 OS=Homo sapiens GN=PLEKHM1 PE=1 SV=3 (Range: 788-845)  ali follow..  21  18............................................TRENGFLLQYLVAIPMEKGLDSQGCFCAGCIGFSFVRP.............................................. 58
9 -4.120sp|Q8WXG6|MADD_HUMAN MAP kinase-activating death domain protein OS=Homo sapiens GN=MADD PE=1 SV=2 (Range: 947-1048)  ali follow..  19  15LNMKKVRRLLESEQLRVFVLSKLNRSEDDARQDIIPDVEISRKVYKGMLDLLKCTVLSLEQ------SYAHAGLGGMASIFGLLEI.......................................... 97
10 -4.110sp|Q9H2P0|ADNP_HUMAN Activity-dependent neuroprotector homeobox protein OS=Homo sapiens GN=ADNP PE=1 SV=1 (Range: 1-73)  ali follow..  21  1MFQLPVNNLGSLRKARKTVKKILS------------IGLEYC----------KEHIEDFKQFEPNDFYLKNTTWEDVGLWDP.............................................. 61

FFAS is supported by the NIH grant R01-GM087218-01
1 2 7 8 2 4   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Pawlowski K, Rychlewski L, Zhang B, Godzik A. Fold predictions for bacterial genomes. J Struct Biol. 2001 May-Jun;134(2-3):219-31. Review.