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Query: TM0019 TM0019 281900 Crystal|NMR-2004-03-31, from JCSG0516

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MLEGKVAVVTGGGQGIGAAIAQLFAENGMKVVIAEIDEEAGVEREEMLRERGLDVTFVKTDVADENSVKNMVRKTVEIYGGVDVLVNNAAVMSVKSIFERPLEEWERVIRVNLTGPYICSRYCAEEMIKRGGGVIINIASTRAFQSEPDTEPYSASKGGLVALTHSLAVSLSRYHIRVVSISPGWIETSEWKKKSLRKKPDLRPIDHEQHPAGRVGNPLDIAHLCVFLADDEKAGFITGTNFIVDGGMTVKMIYEELast
1 -5.150tr|Q6ZNX1|Q6ZNX1_HUMAN CDNA FLJ26957 fis, clone SLV00486 OS=Homo sapiens PE=2 SV=1 (Range: 176-250)  ali follow..  16  36.......................................................IWVFCDIMYCEYVGSLLKGRLALTGKINLFVHKYGV..................................................................................................................................................................... 71
2 -4.170sp|Q9NVE4|CCD87_HUMAN Coiled-coil domain-containing protein 87 OS=Homo sapiens GN=CCDC87 PE=2 SV=2 (Range: 426-547)  ali follow..  10  10.LRNEVVVQAAAVRVSDRNFLDSFHIEGAGALYNHLAGELDPKAIEKMDI----------DNFVGSTTREVYKELMSHVSSDHLHFDQGPLVEPAADKDLRQEKQPQIINPELVG............................................................................................................................................. 122
3 -3.940sp|O00522|KRIT1_HUMAN Krev interaction trapped protein 1 OS=Homo sapiens GN=KRIT1 PE=1 SV=2 (Range: 59-277)  ali follow..  13  1..........................................................QGNSEITQGILDYVVETTKPISP-----ANQGIRGKRVVLKFPLDGEKMGREASLFIVPSVVKDNTKYTYTPGCPIFYCLQDIMRVCSESSTHFATLTARMLIALDKALFRPSPLERIKTNVINPAYATESGQTENSLHMGYSALEIKSKMLALEKA......................................... 167
4 -3.900tr|A8MWC2|A8MWC2_HUMAN Uncharacterized protein OS=Homo sapiens PE=4 SV=1 (Range: 1-77)  ali follow..  1................................................................................................MVTLPSGTWAFSCPYLALVDGGMLGSAREDAHETGTCCVAQAG--LELLVLSNHTALATQSTGITGVNHHT......................................................................................... 69
5 -3.750sp|Q8ND61|CC020_HUMAN Uncharacterized protein C3orf20 OS=Homo sapiens GN=C3orf20 PE=1 SV=2 (Range: 1-88)  ali follow..  18  4.........................................................IKSNLELYQQYTAMAPKLLARISKLLMICQNAGISVPKGIRNIFEFTWEELIS.................................................................................................................................................. 56
6 -3.710sp|Q8WWC4|CB047_HUMAN Uncharacterized protein C2orf47, mitochondrial OS=Homo sapiens GN=C2orf47 PE=1 SV=1 (Range: 192-291)  ali follow..  1..........................................................................................................NALAANIDEIVFTSTGDISIYYDEKGRKFVNILMCFWYLTSANIPSETLRGASVFQVKLGNQNVETKQLLSASGVKPDWTIA.................................................................... 91
7 -3.640sp|Q9Y5P8|P2R3B_HUMAN Serine/threonine-protein phosphatase 2A regulatory subunit B`` subunit beta OS=Homo sapiens GN=PPP2R3B PE=1 SV=2 (Range: 128-250)  ali follow..  48......................................................................................................................................................................................PLYWKGPLFYGAGGERTGSVSVHKFVAMWRKILQNCHDDAAKFVHLLMSPGCNYLVQEDFV----FLQDVVNTH 118
8 -3.610tr|F6URX5|F6URX5_HUMAN Uncharacterized protein OS=Homo sapiens GN=PPP2R3A PE=4 SV=1 (Range: 1-78)  ali follow..  1........................................................................................................................................................................MDIEEQKADIYEMGPLYWKAPMFRAAGGEKTGFVTAQSFIAMWRKLLNNHHDDASKFICLLAKPNCSSLE.................. 78
9 -3.570tr|F5H0X0|F5H0X0_HUMAN Uncharacterized protein OS=Homo sapiens GN=CACNA1C PE=4 SV=1 (Range: 1-100)  ali follow..  18  30....................................................................................................................................GTLVHEAQLNYFYISPGGSNYGSPRPAHANMNANAAAGLAPEHIPTPGAALSW....................................................................... 82
10 -3.560sp|A6NHR9|SMHD1_HUMAN Structural maintenance of chromosomes flexible hinge domain-containing protein 1 OS=Homo sapiens GN=SMCHD1 PE=1 SV=2 (Range: 27-142)  ali follow..  12  1.............................TVYLFDRREKESELGDRPL------------QVGERSDYAGFRACVCQTLG---ISPEEKFVITTTSRKEITCDNFDETVK---DGVTLYLLQSVNQLLLTATKERIDFLPHYDTLVKSGMYEYYASEG.................................................................................................. 111

FFAS is supported by the NIH grant R01-GM087218-01
1 2 4 1 8 9   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Sasin JM, Godzik A, Bujnicki JM. SURF'S UP! - protein classification by surface comparisons. J Biosci. 2007 Jan;32(1):97-100.