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Query: gi|108885078|ref|NP_072678.2| SNF2 family helicase putative (MG_018) [Mycoplasma genitalium G37] (Range: 1-500), from M.genitalium

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTVAEIKKLALNNQVFNEAKALLEKGNVIFPKKFLKRKKIIIEVLDGKVFKVQINLKTAAAHLDCSCSNDKQNCVHIIAALLKYNDLKNQDNKEFDLNKADKLECKEVEILIENVSLAIVNGSWKLKIGFVINIDKVQTNTTALRFYCCDNKDVYFLHTEDEQLFRIALDKFNSVERQTLLIFDQLNKTKQMQYENNSLLFNLDQFLSLVKEVKKPSLFLLNEDKTDNILFLRSQHKINGLSHVCGFLNNKVFDFVSYNEKTKQIVLRLAYLNKFTDFKFPYNINIYKLAFGETLFFHFLIHLKMNGFKNIFFQSDVVIVKESEYLPKMFLTIEFNTQKNKFITDAFFKYKNKNSNTLTTVYPHRYYLAQKTNTSNFNRLLFYEQALQRFYEELFQIDYLRRFENIPIKDKNQIALFKTVFDDYKTIDLAELKLTSNLLNYKQLHFSISDIKALKIEDRQLKIEFKAGGIDLKLIKSVLSNYYKGNAICIGEDGWYDLNDLast
1 -2.830HGC00991 gi|163600283|dbj|BABF01000984.1|3.0 TMP01348;  ali follow..  13  3............................................VDTKLINLKLWGYITMKKMIAYCGLDCEKCDAYIATINDNQELRKKTAKLWAELNNAPILPEHIN....................................................................................................................................................................................................................................................................................................................................................................................................... 67
2 -2.380PB023339 Q8A4U7_BACTN/1-171 PB023339; Pfam-B_23339;  ali follow..  41.......................................................................................................................................................................................................................................................................................................................................DLVVSKVIYRLDGSLYRHMKYDFTYDDQKRVTAKEAFKWDSSTEKWIPYFKIDYAYSS-TLVYARWNNSHRAYDDSVEKSVYELNDANMPIAYMNYKWNDY-WAMNIQTPVTDEADLLLA..................................................... 170
3 -2.060PB022506 Q11RP6_CYTH3/1-298 PB022506; Pfam-B_22506;  ali follow..  21..........................................................................................................................................................................................................................................ETEHLAKYHLSFQVNFELFRICIVDGDSNRCLFLEDYTLADIYTTNDLLEQLDILFEDHIL-------IKAGFWKSITVGFKN---TQFSLIPEALFEKDYLKEYLTLNTTLEYHFYKQRQTEAVNVF--------NQRLTSWFNKTYPLKQVRYVHHTASMIEGIMLQKDKNAAEKSVFIQVEQYFLTKQGKKLIFCNSFTFNTSEDFVYFILFVFDQLELNPEKCPVVVFGEITHDSESFSKLYKYIRH............... 264
4 -1.820PB027778 Q5LHJ0_BACFN/1-110 PB027778; Pfam-B_27778;  ali follow..  14  12........................................................................................................................................................................................................................................................................................................................ADDEKTIEFIRNYLPQ--LKEKFSEDELYYFLDLIDEYYSESG------------ILDVQPDADGYVDIDLEQVVEFIVKE-------AKKDEVGEYDPEDILFVVQGEMEYGNS......................................................................... 106
5 -1.820PB162020 _JGI.0344610_ 2004040329 [Human Gut Community Subject 8]  ali follow..  17  2...........................................................................................................................................................................................................................................................................................................................................................................................................................................TETQFKVQAEQQRLEAVTAQVAD-KKLEALQKETKAA-RATALTVQDIEAMGKKATFGNNITLTPDECRTLKD 88
6 -1.790PB019388 gi|83589066|ref|YP_429075.1| Radical SAM [Moorella thermoacetica ATCC 39073]gi|83571980|gb|ABC18532.1| Radical SAM [Moorella thermoacetica ATCC 39073]  ali follow..  17......................................................................................................................................................................................................................................................VLASSAITYEEMLRLHAIEGLLKYYGNS---HLADHAFAYLAATAFDGSYFAIYEALAAWWEARGLLRRGHSQRDLFNHL-ASFAIHLARGIATRVTVPPLPGYHDSILEINSHGDTPASGAEHSGCARNLTPA---------------QLDRFYQLLKFDCLCRDRSRNFPGWMPPSPLTEEERSNWMARITTPRSMEKYMPGLVKESPANLRRHGFIELFPCHPERPEEVFFYYG................. 239
7 -1.290PB023890 Q7MUU3_PORGI/1-263 PB023890; Pfam-B_23890;  ali follow..  10  5.......................................................................................................................................................................................................................................................VCSPWGRFGCY------LLLFACPIIFASIMKKEFIGRTAKSLSLALAIFSGCIFGSVLPAWSQEIVAGE-LERCFLAMPESVLPIVTMEERNDLCRRAGHLSGFTHTASLESSLGGTVTFLLNRNFIRIQTSTVGEVFMRILPFSDSSSVICVVTTVLHPVADSRIDFYTTEWKPLKTDRFWQQPRIEDFFHTDRQSYAYQAIYALSEESDTLSIRQTVTETLAEEEKPLAAIFLSPEPLVYR......... 253
8 -1.240HGC00878 gi|162869432|dbj|BABB01000575.1|7.0 TMP01167;  ali follow..  10  9......................................................................................................................................................................FHARTENKTDLDKIEDFLDDTFSEFTNRYGDSVDAEFSSRWVYPEEEIKKLVESLEDKDKVYIKILTYEFEDEY-VSFRIFSQGEW........................................................................................................................................................................................................................................................ 93
9 -1.150PB040621 Q8A865_BACTN/1-132 PB040621; Pfam-B_40621;  ali follow..  11  11........................................................................................................................................................................................................................................................................ALVLTMCSAFSLKKGHSKTVYAFGIAASFTDTVVYFTDIQI--KEGFLTHRDLYSYQLKNYVQNSTCMIYFSENRKKLEKKILSKYKRNRNTTVTRIDTDKF...................................................................................................................................... 126
10 -1.140PB000119 Q6KIT1_MYCMO/1-381 PB000119; Pfam-B_119;  ali follow..  16  186........................................................................................................................................................................................................................................................................................FKEIKFKKINFFSSIFLSFISIFALTIT----FAYNSTFLNLAQIVRINTIRPNPNPNPNEI-----FNFDLNNENGLLTVEAIWFLQSKMELTDTATVIIINNTAYVNINKNSVKVNYLKSEENNWYLTGRDFPLLGLFVEKFFKDDVALYFVVNNSTKN----FSSVGISSLSTNNPKLIFTFT.................................. 375

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Zhi D, Krishna SS, Cao H, Pevzner P, Godzik A. Representing and comparing protein structures as paths in three-dimensionalspace. BMC Bioinformatics. 2006 Oct 20;7:460.