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Query: gi|108885078|ref|NP_072678.2| SNF2 family helicase putative (MG_018) [Mycoplasma genitalium G37] (Range: 501-1000), from M.genitalium

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst ENAKALISFWSQIDLRNATCDANNNLLLAKYHLFEVVDTISKYTDVTNLLDEKTALQLKIASENQFHLSLDNNQINNLRKYQKEGVKWIRALEDNQFGGILADEMGLGKTAQVIFAMLDSYQSTKSLLPSLIIVPASLLLNWKSEFQKFAPHVKIVTANGNFKERSQVYESLKNQILLMSFNVLRSDIKWISQKKFHYVVIDEAQGIKNENSTVTKAAKKIKGNFCLALTGTPIENRLLDLWSCFDFVLPNFLGNKKQFSDQFEKEKNDESFQKLMKKTSPFILRRTKNKVLKELPKKIITDIYVELSEEHQKLYDKQKTDGLKEIKESDAKNALNILSLILKLRHICSLVKDNDVNDFEDNSKANAALNIIYEALENKRKVILFTQFLDVIDCFKQTLKNQKIDHLVFDGRKTVKNRNTIIQKFNSAKEPCVMLASLKAGGVGINLTAAEVVIHFDVWWNSAVENQATDRAHRIGQSKTVQVYRIIAKNTIEERVCQVQLast
1 -3.690PB046158 _JGI.0336690_ 2004028347 [Human Gut Community Subject 8]  ali follow..  1..................................................................................................................................................................................................................................................................................................LQEEVNQKVISLSIQGVKITASVLKAAVRKFLEMDNRRKQKATQVKMAEKTGRAQEKGREKARKKIEKKKPHGKQT-----IKQLNAQGVQLSNIKITDENIKSFDRVARKYGIDYSLKKEVGADPPKYLVF--FKAKDVDVM................................................................... 136
2 -3.680PB007011 gi|160888195|ref|ZP_02069198.1| hypothetical protein BACUNI_00603 [Bacteroides uniformis ATCC 8492]gi|156862330|gb|EDO55761.1| hypothetical protein BACUNI_00603 [Bacteroides uniformis ATCC 8492]  ali follow..  11  109.....................................................................................................................................................................................................WAVFDKDEHPARKDAFEEAEKLIDDKKVNIAFS-----SRSFEYYLLLH------------FEYLYHPFHATECGERIDGKKVNYNCMTEKSKENACHGEKCINGYYWNETKTSQSTFPLIEKRLKAGIINA------------KRLRIESNSKENCPIYDRNPYTNVDKLVCRL................................................................................................................................ 259
3 -2.630PB007843 JCVI_PEP_1096682172521 /source_dna_id=JCVI_ORF_1096682172520 /offset=0 /translation_table=11 /length=152 /full_length=152  ali follow..  13  1....................................................................................................................................................................................................................................................................................................................................................LEKIISISGRPGLFEVHTQTRTG-------VVATSLVDGKRINANAR--NQVSLLSE------INIYGLEKEVPLQEVLTMIHTKEEGKQCS---VKPKSPADELEAYFFDVFQDYD-----------EERVYPSDIKKIIQWYNILAEKVPQV...... 125
4 -2.380PB005684 gi|160884252|ref|ZP_02065255.1| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]gi|156109991|gb|EDO11736.1| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]  ali follow..  113...................................................................................................FVVAPSASGKGLSYIRLLVEPIHDEIRKE-------TIQMKAYKKEKAEYMPPNRMFLISGNNTGTGILQNIMDSDICEAEADTLSTAIGSDHGHWSDTLR--DHDRLSYNRRTDQEYREVKKSYLSVLISGTP-----SQVQTFIPTAEDGSYSCGISKWISQFMDNEIDWEEIFTAMGLEWK------EKLSVIKTHGIHT--LQLTDEQKEEIDTVFSDLFERSSVANGRERIMSEVAVLRALESPQPYDFKTSPTSPFTPDKEIPTDNRKDDIITRWDVSI-EDFHAVLSLAEPLYCHATHILSFLPNTEISHRPNADRDYLFQKLGDEFTRTQLLEEAVAMGIKENTALTWLKRL----TKHGKLISMDGKG........................ 507
5 -2.320PB014033 A5ZI39_9BACE/1-158 PB014033; Pfam-B_14033;  ali follow..  19.........................................................................................................................................................................................................................................................................................................................................................................................................................NGMQKKVTEPYLVDALSFTEAEARIIEEMTP--SDIKRANYSELFPSDRWFKCKLIFITLDE--KSGAEKKTSTQVLVQAADLRDAVKKLD 118
6 -2.170HGC00928 gi|162868028|dbj|BABB01001979.1|3.0 TMP01255;  ali follow..  11  8.........................................................................................................................................................................................................................................................................PMARTATEKLEMRGQSVTVENIGKTVTDGFEKVSNNVNDFISSDKPRNFFQKLADVFVLVIGF------LKFFIILAGIFLLPPLVLVVFILVVVTFALLMGGAGFIYNLSPFGADLINGAPLSMAIMGCIGTILFIGIPIFSL-AICSQLFKIRPLPTQARWILLALWLISF----CGVYIHQSGMLYDWHNYWN....................................... 197
7 -2.150PB128892 A6TNK2_9CLOT/1-174 PB128892; Pfam-B_128892;  ali follow..  14  1.................................................................................................................................................................................................................................................................................................................................MFFNTSEQLAENKLVLLYIFDRVQFPLANIQLTQFIMENDIMNYFMLQQFIGELKESSQLFMITDQGKKTLTYFISRIPRLKIDHLLNIKKEEFVRNTEIKGEYEKLTDNE-YLVKLSVIEQGTPIFNLKLSV---------GNVKQAKDMCEKWRSDAQELYGQIINLLI........ 174
8 -2.150PB001565 Q6LS01_PHOPR/1-384 PB001565; Pfam-B_1565;  ali follow..  10  4.........................................................................................EHLLKKRWNKPVVNMVVLTKQF-VLSTLVTNKRCHTTTYASHAIT-MALFESYDRRIDQITPVLEQYGFASFEEALEYCKERN-----VNPYDIVKETQPIAFENASWAYVLGAAIALKEDAKNAAEAAEYIQGLQAFCIPGSVADQRLNNDTQCFCFLA----------HESYAAAEGAIKIAMNANKVRHHPLRVILNGLGKDAAYMIARINGFNYVQTQFNYETGELDVVSERRFSTSQRGDINVREGVAIMHREEVDISITGNSTNPTRFQHPVAGTYKKERLEANQAYFVASGGGTGRTLHPDNVAAGPASY----GMTDTMGRMHSDAQFAGSSSVPAHVEMMGLIGMGNNPMVGATV............................................... 375
9 -2.110PB032242 Q8FLW6_COREF/1-257 PB032242; Pfam-B_32242;  ali follow..  35..........................................................................................................YGSLTMTAGLILSLQITAGMVWVAFLAVAAIFGVLWFVEPLTYFPIL-QAFMIGNISNKLVPAAIVAQSSIGAKAGS------------------KRGDLAAVMAIGGAATMHLLSLLIFVGFLGTWLVSLVPVIEVARLYIMPSLMGA..................................................................................................................................................................................................................................................... 184
10 -2.040PB162020 _JGI.0344610_ 2004040329 [Human Gut Community Subject 8]  ali follow..  12  1...............................................................................................................................................................................LTETQFK-VQAEQQRLEAVTAQV--LEALQKETKAARATALTVQDIEAMGKKATFGNNITLTPDECRTLKDYAVSSFAEKAEKLKYKQKYEQ-NEKYLELKKKAQPYL------DALEIASEKVRAFLDAVLARGKET........................................................................................................................................................................................... 163

FFAS is supported by the NIH grant R01-GM087218-01
1 2 9 7 3 7   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Zhi D, Krishna SS, Cao H, Pevzner P, Godzik A. Representing and comparing protein structures as paths in three-dimensionalspace. BMC Bioinformatics. 2006 Oct 20;7:460.