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Query: gi|108885076|ref|NP_072662.2| DnaJ domain-containing protein (MG_002) [Mycoplasma genitalium G37], from M.genitalium

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MNLYDLLELPTTASIKEIKIAYKRLAKRYHPDVNKLGSQTFVEINNAYSILSDPNQKEKYDSMLKVNDFQNRIKNLDISVRWHENFMEELELRKNWEFDFFSSDEDFFYSPFTKNKYASFLDKDVSLAFFQLYSKGKIDHQLEKSLLKRRDVKEACQQNKNFIEVIKEQYNYFGWIEAKRYFNINVELELTQREIRDRDVVNLPLKIKVINNDFPNQLWYEIYKNYSFRLSWDIKNGEIAEFFNKGNRALGWKGDLIVRMKVVNKVNKRLRIFSSFFENDKSKLWFLVPNDKQSNPNKGVFNYKTQHFIDLast
1 -78.0003lz8_A mol:protein length:329 Putative chaperone DnaJ  ali model follow..  17  23.DYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKEAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPGFGRQRQTHEQSYS---------QQDFDDIFSSMFGAHQRRRQHAARGHDLEIEVAVFLEETLAEQTRTISYNL-----------------------------------------------------------------PVYNVFGMIESETPKTLNVKIPAGVVDGQRIRLKGQGTPGGGPNGDLWLVIHIAPHP---------LFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKES. 253
2 -72.6004j80_A mol:protein length:284 Chaperone protein DnaJ 2  ali model follow..  17  6.DYYAILGVPRNATQEEIKRAYKRLARQYHPDVNKSAEEKFKEINEAYAVMSDPEKRRIYDTYGTTEAPPPPPPGG----------YDFSGFDVEDFSEFFQELFG-----PGLFGKGRDLRAELPLTLEEAFHGGERVVEVAGRRVS-------VRMPPGVREGSVIRVPGMGG-QGNPPGDLLLVVRMLPHPVFRLEGQDL-LDVPAPIAVVGGKVRAMTEGPVEVAVPPRTQAGRKMRLKGGGFPGPAGRGDLYLEVRITIPER---------LTPEEEALWKKLAEAYYARAAAAL.......... 277
3 -55.0005y88_T mol:protein length:283 Pre-mRNA-splicing factor CWC23  ali model follow..  15  14LNLYDVLELPTPLDVPQIKRKYRTLALKYHPDKHPDIIHKFHLLSTATNILTNADVRPHYDRWLIEFLRKTNDIERNKLIQKLEESESSTIPTTTPHPDLLQ-----------IQRHGELLRKHFNLPYGDWKHLNTQDQENAS-------------------------------------------------QHPYYDCSTLRIVLDNFLQSNNKSN-CLSHLRNQVFITLSANEIYDIYFSERNNYSKDDIIYTVFDTPITAQH---------VFRNWSSGN-------LIPTVKDISPLIPLHYYSD 260
4 -52.9003apq_A mol:protein length:210 DnaJ homolog subfamily C member 10  ali model follow..  17  3.NFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDNQGGQYESWSYYFGIYDDDPEIITLERREFDAAVNSGELWFVNFYSPGCSHCHDLAPTWREFAKEVDGLLRIGANCGDDRMLCRMKGVNS---PSLFIFRSGMAAVKYNGDRSKESLVAFAMQ..................................................................................................................... 199
5 -46.1001nlt_A mol:protein length:248 Mitochondrial protein import protein MAS5  ali model follow..  13  1...........................................................................................................GAQRPRGPQRGKDIKHEISASLEELYKGRTAKLALNKQILC--KECEGRGGKKGA-VKKCTSCNGQGIKFVTRQ----MGPMIQRFQTECDVCHGTGDIIKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAPDIPGDVVFIVSERPHKS---------FKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDW 190
6 -44.4004j7z_A mol:protein length:113 Chaperone protein DnaJ 2  ali model follow..  31  5.DYYAILGVPRNATQEEIKRAYKRLARQYHPDVNKSAEEKFKEINEAYAVLSDPEKRRIYDTYGTTEAPPPPPPGG----------YDFSGFDVEDFSEFFQELFGPGLFGGFGRRS................................................................................................................................................................................................. 112
7 -43.1005nro_B mol:protein length:108 Chaperone protein DnaJ  ali model follow..  28  5.DYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGG---------GADFSDIFGDVFGDIFGGGSSH....................................................................................................................................................................................................... 108
8 -43.0002ctw_A mol:protein length:109 DnaJ homolog subfamily C member 5  ali model follow..  29  18.SLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDAADKFKEINNAHAILTDATKRNIYDKYGSLGLYVAEQFGEENVNTYFVSGPSS............................................................................................................................................................................................................................. 108
9 -42.9004rwu_A mol:protein length:92 Protein SIS1  ali model follow..  29  9.KLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTEKFKEISEAFEILNDPQKREIYDQYGLEAARSGGPSFGPGGPGGAGG................................................................................................................................................................................................................................. 92
10 -42.8001xbl_A mol:protein length:107 DNAJ  ali model follow..  27  4.DYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGGGFGG---------GADFSDIFGDVFGDIFGGGRGR....................................................................................................................................................................................................... 107
11 -42.7002yua_A mol:protein length:99 Williams-Beuren syndrome chromosome region 18 protein  ali model follow..  35  18.ALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGAAERFTRISQAYVVLGSATLRRKYDRGLLSDEDLRGPGSGPSSG...................................................................................................................................................................................................................................... 99
12 -42.7002n04_A mol:protein length:105 DnaJ homolog subfamily C member 5  ali model follow..  34  20.SLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDAADKFKEINNAHAILTDATKRNIYDKYGSLGLYVAEQFGEE......................................................................................................................................................................................................................................... 98
13 -42.2002lgw_A mol:protein length:99 DnaJ homolog subfamily B member 2  ali model follow..  29  3.SYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGTGTGPSRAEAGSGGPGLE.............................................................................................................................................................................................................................. 93
14 -41.8002ctq_A mol:protein length:112 DnaJ homolog subfamily C member 12  ali model follow..  23  21.DYYTLLGCDELSSVEQILAEFKVRALECHPDKHPEAVETFQKLQKAKEILTNEESRARYDHWRRSQMSMPFQQ............................................................................................................................................................................................................................................ 96
15 -41.6002ctr_A mol:protein length:88 DnaJ homolog subfamily B member 9  ali model follow..  36  8.SYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTSGKGQSGPSSG...................................................................................................................................................................................................................................... 88
16 -41.6002l6l_A mol:protein length:155 DnaJ homolog subfamily C member 24  ali model follow..  31  11.DWYSILGADPSANISDLKQKYQKLILMYHPDKQSTCVQKFIEIDQAWKILGNEETKREYDLQRCEDDLRNVGP............................................................................................................................................................................................................................................ 92
17 -41.5002cug_A mol:protein length:88 mKIAA0962 protein  ali model follow..  36  18.DPYRVLGVSRTASQADIKKAYKKLAREWHPDKNPGAEDRFIQISKAYEILSNEEKRTNYDHYGSGPSSG................................................................................................................................................................................................................................................ 88
18 -41.4002dmx_A mol:protein length:92 DnaJ homolog subfamily B member 8  ali model follow..  31  10.NYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRAGGGASGPSSG...................................................................................................................................................................................................................................... 92
19 -40.7002qsa_A mol:protein length:109 DnaJ homolog dnj-2  ali model follow..  34  16.NCYDVLEVNREEDKQKLAKAYRALARKHHPDRVKNAEERFRVIATAYETLKDDEAKTNYDYYLDHPDQRF............................................................................................................................................................................................................................................... 92
20 -40.0002och_A mol:protein length:73 Hypothetical protein dnj-12  ali model follow..  36  9.GYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAEQFKQISQAYEVLSDEKKRQIYDQGGEE.................................................................................................................................................................................................................................................... 73
21 -39.6001wjz_A mol:protein length:94 1700030A21Rik protein  ali model follow..  30  17.DWYSILGADPSANMSDLKQKYQKLILLYHPDKQSACMQKFIEIDQAWKILGNEETKKKYDLQRSGPSSG................................................................................................................................................................................................................................................ 94
22 -39.1002dn9_A mol:protein length:79 DnaJ homolog subfamily A member 3  ali model follow..  40  8.DYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGPSSG................................................................................................................................................................................................................................................ 79
23 -39.1002ctp_A mol:protein length:78 DnaJ homolog subfamily B member 12  ali model follow..  33  8.DYYEILGVSRGASDEDLKKAYRRLALKFHPDKNPGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGPSSG................................................................................................................................................................................................................................................ 78
24 -39.0002lo1_A mol:protein length:71 DnaJ homolog subfamily A member 1  ali model follow..  38  7.TYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLSDAKKRELYDKGGEQ.................................................................................................................................................................................................................................................... 71
25 -38.9001hdj_A mol:protein length:77 HUMAN HSP40  ali model follow..  41  4.DYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGSGC............................................................................................................................................................................................................................................. 77
26 -38.9002ej7_A mol:protein length:82 HCG3 gene  ali model follow..  33  10.DYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPSSG................................................................................................................................................................................................................................................ 82
27 -38.6005vso_A mol:protein length:75 Yeast dnaJ protein 1  ali model follow..  44  11.KFYDILGVPVTATDVEIKKAYRKCALKYHPDKNPSAAEKFKEASAAYEILSDPEKRDIYDQFG...................................................................................................................................................................................................................................................... 75
28 -38.5003ucs_C mol:protein length:74 Curved DNA-binding protein  ali model follow..  39  6.DYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKDAEARFKEVAEAWEVLSDEQRRAEYDQMWQ..................................................................................................................................................................................................................................................... 71
29 -38.4002m6y_A mol:protein length:77 DnaJ homolog subfamily A member 1  ali model follow..  40  10.TYYDVLGVKPNATQEELKKAYRKLALKYHPDKNPNEGEKFKQISQAYEVLSDAKKRELYDK........................................................................................................................................................................................................................................................ 70
30 -36.9002ys8_A mol:protein length:90 Rab-related GTP-binding protein RabJ  ali model follow..  26  28.DSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCPGSEDAFKAVVNARTALLKNIKSGPSS......................................................................................................................................................................................................................................................... 89
31 -36.5001gh6_A mol:protein length:114 Large T antigen  ali model follow..  21  9.QLMDLLGLERSAWGNLMRKAYLKKCKEFHPDKG-GDEEKMKKMNTLYKKMEDGVKYAHQPDFGGFWDATEIPTYG.......................................................................................................................................................................................................................................... 84
32 -34.2002pf4_E mol:protein length:174 Small T antigen  ali model follow..  21  12.QLMDLLGLERSAWGNLMRKAYLKKCKEFHPDKG-GDEEKMKKMNTLYKKMEDGVKYAHQPDFGGFWDATEVFAS........................................................................................................................................................................................................................................... 86
33 -30.9001faf_A mol:protein length:79 LARGE T ANTIGEN  ali model follow..  20  12.RLLELLKLPRQGDFGRMQQAYKQQSLLLHPDKG-GSHALMQELNSLWGTFKTEVYNLRMNLGGTG.................................................................................................................................................................................................................................................... 77
34 -29.3002q2g_A mol:protein length:180 Heat shock 40 kDa protein, putative (fragment)  ali model follow..  14  13..................................................................................................................................................................................................TLEELYLGKRKKIKVTRKRFIEHKVRNEENIVEVEIKPGWKDGTKLTYSGEGDQEGTSPGDLVLIIQTKTHP---------RFTRDDCHLIMKVTIPLVRALTGFTCPVTTLDNRN 121
35 -27.8001iur_A mol:protein length:88 KIAA0730 protein  ali model follow..  18  11.EVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPEANEVFKHLQNEINRL---EKQAFLDQNADRASRRT............................................................................................................................................................................................................................................... 81
36 -27.4003agz_A mol:protein length:190 DnaJ homolog subfamily B member 1  ali model follow..  12  1...........................................................................................................SAQEPARKKQDPPVTHDLRVSLEEIYSGCTKKMKISH-----------------------------------------------------------------KRLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNIPADIVFVLKDKPHN---------IFKRDGSDVIYPARISLREALCGCTVNVPTLDGRT 130
37 -26.6002ctt_A mol:protein length:104 DnaJ homolog subfamily A member 3  ali model follow..  1.....................................................................................................................GSSGSSGMELTFNQAAKGVNKEFTVNIMDTC--ERCNGKGNEPGTKVQHCHYCGGSGMETINT--------GPFVMRSTCRRCGGRGSIIISPCVVCRGAGQAKQKK--RSGPSSG............................................................................. 104
38 -25.7002b26_A mol:protein length:173 SIS1 protein  ali model follow..  13  10..................................................................................................................................................................................................SLEDLFVGKKKSFKIGRKGPHGAS---EKTQIDIQLKPGWKAGTKITYKNQGDYNTGRRKTLQFVIQEKSHP---------NFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRT 115
39 -25.6003uo2_A mol:protein length:175 J-type co-chaperone JAC1, mitochondrial  ali model follow..  27  4.TFYELFPKTFPKDQSRLRKEYRQLQAQHHPDMAQQGSEQSSTLNQAYHTLKDPLRRSQY.......................................................................................................................................................................................................................................................... 69
40 -24.5001n4c_A mol:protein length:182 Auxilin  ali model follow..  22  118.TKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEFMELNDAWSEFENQGQKPLY.......................................................................................................................................................................................................................................................... 182
41 -21.8002guz_A mol:protein length:71 Mitochondrial import inner membrane translocase subunit TIM14  ali model follow..  19  15.EALQILNLTENLTKKKLKEVHRKIMLANHPDKG-GSPFLATKINEAKDFLEKRGISK............................................................................................................................................................................................................................................................ 71
42 -21.6003uo3_A mol:protein length:181 J-type co-chaperone JAC1, mitochondrial  ali model follow..  28  11STFYELFPKTFTIDQSRLRKEYRQLQAQHHPDMAQQGSEQSSTLNQAYHTLKDPLRRSQY.......................................................................................................................................................................................................................................................... 77
43 -19.2001fpo_A mol:protein length:171 CHAPERONE PROTEIN HSCB  ali model follow..  30  1MDYFTLFGLPAQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLINQAWQTLRHPLMRAEY.......................................................................................................................................................................................................................................................... 70
44 -18.9004it5_A mol:protein length:174 Co-chaperone protein HscB homolog  ali model follow..  33  4MNYFELFGLPIELDGSLLSSQFRALQKRFHPDNFATASERDRLINDAYQTLKDPLRRAEY.......................................................................................................................................................................................................................................................... 73
45 -18.8003bvo_A mol:protein length:207 Co-chaperone protein HscB, mitochondrial precursor  ali model follow..  25  43RDYFSLMDCNRRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDVNDAYKTLLAPLSRGLY.......................................................................................................................................................................................................................................................... 112
46 -17.8002guz_B mol:protein length:65 Mitochondrial import inner membrane translocase subunit TIM16  ali model follow..  5.ESCKILNIEEDLNMDKINNRFNYLFEVNDKEKG-GSFYLQSKVYRAAERLKWELAQRE........................................................................................................................................................................................................................................................... 64
47 -17.2001exk_A mol:protein length:79 DNAJ PROTEIN  ali model follow..  1......................................................................................................................................GVTKEIRIPTLEEC--DVCHGSGAKPGTQPQTCPTCHGSGQVQMRQ--------GFFAVQQTCPHCQGRGTLIKDPCNKCHGHGRVERS....................................................................................... 79
48 -16.2003i38_A mol:protein length:109 Putative chaperone DnaJ  ali model follow..  14  8..................................................................................................................DIVGHNLEIVLPLAPWEAALGAKVTVPT-------------------------------------------------------------------------------LKESILLTVPPGSQAGQRLRIKGKGLVSKTHTGDLFAVIKIVMPTKPDEKARELWQQ................................ 92
49 -15.5002y4t_A mol:protein length:450 DNAJ HOMOLOG SUBFAMILY C MEMBER 3  ali model follow..  36  377.DYYKILGVKRNAKKQEIIKAYRKLALQWHPDNKKKAEKKFIDIAAAKEVLSDPEMRKKFDD........................................................................................................................................................................................................................................................ 443
50 -13.7006ekb_A mol:protein length:81 DnaJ/Hsp40 cysteine-rich domain superfamily protein  ali model follow..  1...................................................................................................................................MAANNNPQGTKPNSLVC--ANCEGEGC------VACSQCKGGGVNLIDHF------NGQFKAGALCWLCRGKKEVL---CGDCNGAGFIGGFLSTFDE................................................................................. 81
51 -13.2004mo1_A mol:protein length:178 Antitermination protein Q  ali model follow..  11...............................................................................................GMAAFCGKHELSQNDKQKAINMQFAHKVSGKYRGVAKLEGNTKAKVLQVLATF--AYADYCRSA-ATPGARCRDCHGTGRAVDIAK----TELWGRVVEKECGRCKGVGYSRMPASAAYRAVTMLITQPTWSRTVKPLYDALVVQCHKEESIAD............................................................. 162
52 -12.6005ayk_A mol:protein length:783 DnaJ homolog subfamily C member 10  ali model follow..  37  18QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDNQGGQ........................................................................................................................................................................................................................................... 95
53 -11.9002bx9_A mol:protein length:53 TRYPTOPHAN RNA-BINDING ATTENUATOR PROTEIN-INHIBITORY PROTEIN  ali model follow..  1.........................................................................................................................................................................................MVIATDDLEVACPKCERAGEIEGTPCPACSGKGVILTAQTLLDFIQKHLNK.......................................................................... 53
54 -11.0002qwn_B mol:protein length:94 Putative tyrosine-protein phosphatase auxilin  ali model follow..  17  37...WKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEFMELNDAWSEFENQG............................................................................................................................................................................................................................................................... 94
55 -10.0003ag7_A mol:protein length:106 Putative uncharacterized protein F9E10.5  ali model follow..  15  43...WKPVPLMDMIEGNAVRKSYQRALLILHPDKLQQAEKVFELLQEAWDHFNTLGP.............................................................................................................................................................................................................................................................. 105
56 -9.3603lcz_A mol:protein length:53 Inhibitor of TRAP, regulated by T-BOX (Trp) sequence RtpA  ali model follow..  1.........................................................................................................................................................................................MVIATDDLETTCPNCNGSGREEPEPCPKCLGKGVILTAQGSTL-IKKHIHE.......................................................................... 53

FFAS is supported by the NIH grant R01-GM087218-01
1 3 0 6 1 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ma H, Xiong H, Liu T, Zhang L, Godzik A., Zhang Z. Aggregate formation and synaptic abnormality induced by DSCR1. J Neurochem. 2004 Mar;88(6):1485-96.