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Query: gi|13507759|ref|NP_109708.1| helicases MPN020 [Mycoplasma pneumoniae M129], from M.pneumoniae

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MTIAEIRKFAQTTQKFVEAENLFEHGNVVLPKKYLNKARGMAEVLYNSQVIKVSFTAKDGELTCKCSCLANVDNCVHIVAVLLKYHQMLVESKRSFNLAEAFHLDCDQAEMLIENLSLEIIAGGWNFKLGFTINLDKHNPQPSVLRFYCCDATFVYFLHLENDTLHSVELSKFKPEERATLLFFDKLCKQFTVGYDRNSLLFPLAGFLKELQANTEPTIFVFNDDKIDNILFLRISKKHHGLNHVCGFSGKKVFDFVTYKQKEKQIVLRSAYLSKFTDFKFPYTINIYKLQFGEPLFFYFLIQLKRDGFKNFYFQSEDSIVKEKEYLPKLYFKVEYDPVKNKFVSDAFFKYKNHFNKGTTTVYPHRYYMAKKSDRGGFNRLLFYEEAVENFYQDQFDLGYFRKFEHLPIQDKNQIEAFKAALDDLMPVDLAEVSLSDNLLHQKPLHFALSDLEAVAVDDKQIKLSFAPSAVELKLIKRILSAYHKGNVVCIDQESWYDLKQPAAKELIQFWNQFDLRNATSDGNHIYLPKYYLFEVAKIFSQYLDIKNLFDVPTIKKIEDQNNNVFDLSLEHKKITSLRNYQQEGVKWIRGLEENKFGGILADEMGLGKTVQVIFALLDSYLKNHVNLPSLIIVPASLLLNWKSEFEKFAPQIKVKVANIPSKERGELYEKLTNEILIVSFNVLRSDVKLITKQRFHYVVIDEAQGIKNDSSSITKAAKKVKGNFCLALTGTPIENRLLDLWSCFDFVLPSFLGNKKQFTDQFEKEKTDQSFHLLMQRTSPFILRRTKSKVLKELPNKITTDIYVELNPMHQKLYEEERDRGLEEIKQIQDKSSFNILTLILKLRHLCSLPKNSQGILENSAKKEAALEIIHEAIENQRKIILFTQFIDVIDHFKDTFKEQGIEYFIFDGRKSPKSRHSIIEKFNNAKNPCVLLASLKAGGVGINLTAAEVVIHFDVWWNTAVENQATDRAHRIGQKKTVQVYRIIAKNTIEERVCQVQAEKQELVSKTLVEDVNFFESLTNEELLRLFELast
1 -2.810PB014033 A5ZI39_9BACE/1-158 PB014033; Pfam-B_14033;  ali follow..  1............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MAMHTWFECKIRYEKVNGMQKKVTEPYLVDALSFTEAEARIIEEMTP--SDIKRANYSELFPSDRWFKCKLIFITLDE--KSGAEKKTSTQVLVQAADLRDAVKKLDEGMKGTMADY------QIGMVSETPLMDVYP 143
2 -2.200PB007843 JCVI_PEP_1096682172521 /source_dna_id=JCVI_ORF_1096682172520 /offset=0 /translation_table=11 /length=152 /full_length=152  ali follow..  12  1........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................LEKIISISGRPGLFEVHTQTRTGV------VATSLVDGKRINANAR--NQVSLLSE------INIYGLEKEVPLQEVLTMIHTKEEGKQCS---VKPKSPADELEAYFFDVFQDYD-----------EERVYPSDIKKIIQWYNILAEKVPQVFKAETAEEESQEEVAVKEETSS............... 147
3 -2.120PB005684 gi|160884252|ref|ZP_02065255.1| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]gi|156109991|gb|EDO11736.1| hypothetical protein BACOVA_02230 [Bacteroides ovatus ATCC 8483]  ali follow..  32............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................NISDDKEGEEELLPGSEPQHQLPTFPENDWPEFLQRIIKAGSSP-LGALTALGACSLQCFVVAPSASGKGLSYIRLLVEPIHDEIRKE-------TIQMKAYKKEKAEYMPPNRMFLISGNNTGTGILQNIMDSDICEAEADTLSTAIGSDHGHWSDTLR--DHDRLSYNRRTDQEYREVKKSYLSVLISGTP-----SQVQTFIPTAEDGSYSCGISKWISQFMDNEIDWEEIFTAMGLEWK------EKLSVIKTHGIHT--LQLTDEQKEEIDTVFSDLFERSSVANGREMYSFVARLVNLCRIMSEVAVLRALESPQPYDFKTSPRKDDIITRWDVSISQEDFHAVLSLAEPLYCHATHILSFLPNTEISHRPNADRDYLFQKLGDEFTRTQLLEEAVAMGIKENTALTWLKRL----TKHGKLISMDGKG....................................................... 507
4 -2.000PB007733 A3U921_9FLAO/1-209 PB007733; Pfam-B_7733;  ali follow..  17  23......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MIIEGDTIPREFIDLEEV-------IILNKIKFTSDLERRR----------------YLILRRKTRKVWP------------------YAKLASERLSELNARLAS---------------------IKSKSERRKYTKIVQKYIEEQFAAELKKLTRTEGQILVKLIHRQ-----------TGVTT-----QLIKNLRSG---RAFWYDTTAGLFDIELKSE-----YNP--VNNREDFLIEDI----------LQRSFQRNILDNQPSVLNIDYFEASSK...................... 208
5 -1.720PB092941 Q45777_BACTN/1-139 PB092941; Pfam-B_92941;  ali follow..  10  1......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MAKIQIKSEQITPFGGIFCVMEEFDALLSNI------IDSTLGPRTKTF---GYQYSEIFRSLMCVYFCGGSDISTHLMSHLSFHPVLRSCSADT-ILRAIKELTVPNITYTYDFNMADRMNELLRQGTHIYRRIKRG...................... 138
6 -1.700PB002589 gi|91201099|emb|CAJ74158.1| hypothetical protein [Candidatus Kuenenia stuttgartiensis]  ali follow..  10  10...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................WFG--QHIEKKNLRTDD---GLRLEILSPGWWNNEEGPDFKHAEFFLEGKGLIDWIHHKHENQKTYDAVCLH-NDLKGRCVKNFSGKVIQITLSLYLEAELDEIIETIDVGSYIGNKQVIQKITQQWIGGFLDYAGDERILQKAKKYEKWIEN--VLYEAIM-GYKNNKKPFLM-------------LASLVTAETIQSFVPEYTPALPLNEEETKRFDDETIQ---YFDRIFSTWQGIKPKIHQTPLTRESSYTGIR-----PA-----NFPDRRIVAIANILSEHLDNG----LFRYILRIVNEFLSPFLETHDAYRYTPGGKKLNKPQKLL------------------GKERTSNIFVNVII-------PVMLVYARKHNDKALEERLHYIYRNYTP---HPSTSVTKFMGTRIFGTSMVSNKVIHSARRQQGLYQLFK 457
7 -1.630PB007011 gi|160888195|ref|ZP_02069198.1| hypothetical protein BACUNI_00603 [Bacteroides uniformis ATCC 8492]gi|156862330|gb|EDO55761.1| hypothetical protein BACUNI_00603 [Bacteroides uniformis ATCC 8492]  ali follow..  15.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................IICE----GEKTEP-LFFTSLCDKLLDENGGEEEWPQPDIPEEKPSMAD--------LYKNKKKRVKGKKDKLQPEVQGQPPLSWIRLSRKKLNEGVDWAVFDKDEHPARKDAFEEAEKLIDDKKVNIAFS-----SRSFEYYLLLH------------FEYLYHPFHATECGERIDGKKVNYNCMTEKSKENACHGEKCINGYYWNETKTSQSTFPLIEKRLKAGIINA------------KRLRI---KENCPIYDRNPYTNVDKLVCRL............................................................................................................................................................... 259
8 -1.620PB046158 _JGI.0336690_ 2004028347 [Human Gut Community Subject 8]  ali follow..  10  1......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................LQEEVNQKVISLSIQGVKITASVLKAAVRKFLEMDNRRKQKATQVKMAEKTGRAQEKGRE-RKKIEKKKPHGKQT-----IKQLNAQGVQLSNIKITDENIKSFDRVARKYGIDYSLKKEVGADPPKYLVF--FKAKDVDVM---------------------------TAAFREYAGVELKKKQVKKPSVRKKLQKSVERKAKHRQRVKQRQK.......................... 181
9 -1.570PB034180 _Gut.Meta.Jp.0112129_ gi|163310377|dbj|BABD01000320.1||2 (+ 509:1679~0 complete)  ali follow..  10  1.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................MNKLQIYTNDWLKI---HPYTAVQPSDSYFVNLSNKLYGACTLTTLPDIFRKKLGMYIAAYLEDWQSFTAEHKRLYGKYLPFYPTNSNYVADEINEEDIRFIIWNTWQK-----------AASLHEKTYINPNEHAIKEQAGIFYGILEEAYENAPENESLNHY---------------------FDHPGTAVEADRKLTWLHSYLTEPSMLPYIEQIAPNDRFIVPVGP----------------------LALFLHEWISLLTTSDAWKQINGLFTGNPEIPQEIQDKNREIYRNFTNGKRIVYLNGYTELRRFLVNVLK--------------QDDDNHTLPQMKEYKNFILMTEPEK----GVLLAKDICEYIADR--NP--SERAQANAFRM----------LTEEMLCPPDLLVHCINNKLIPDAQLPDGTE--KELVQQNADFIAR 379
10 -1.530PB162020 _JGI.0344610_ 2004040329 [Human Gut Community Subject 8]  ali follow..  10  1...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................LTETQFK-VQAEQQRLEAVTAQV--LEALQKETKAARATALTVQDIEAMGKKATFGNNITLTPDECRTLKDYAVSSFAEKAEVWKRRFEA---NEKYLELKKKAQPYL------DALEIASEKVRAFLDAVLARGKETRELKIPARKRGQ............................................................................................................................................................................................................. 175

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Grynberg M, Topczewski J, Godzik A., Paszewski A. The Aspergillus nidulans cysA gene encodes a novel type of serine O-acetyltransferase which is homologous to homoserine O-acetyltransferases. Microbiology. 2000 Oct;146 ( Pt 10):2695-703.