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Query: gi|15607154|ref|NP_214526.1| hypothetical protein (Rv0012) [Mycobacterium tuberculosis H37Rv], from M.tuberculosis

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MRLTHPTPCPENGETMIDRRRSAWRFSVPLVCLLAGLLLAATHGVSGGTEIRRSDAPRLVDLVRRAQASVNRLATEREALTTRIDSVHGRSVDTALAAMQRRSAKLAGVAAMNPVHGPGLVVTLQDAQRDANGRFPRDASPDDLVVHQQDIEAVLNALWNAGAEAIQMQDQRIIAMSIARCVGNTLLLNGRTYSPPYTIAAIGDAAAMQAALAAAPLVTLYKQYVVRFGLGYCEEVHPDLQIVGYADPVRMHFAQPAGPLDYLast
1 -59.3003gmg_A mol:protein length:170 Uncharacterized protein Rv1825/MT1873  ali model follow..  28  4.....................................................................................QASGNTDQAALESAQARLAALSILVGAVGATGPGVMITIDDPGPG---------------VAPEVMIDVINELRAAGAEAIQINDARVGVDTWVVGVPGSLTVDTKVLSPPYSILAIGDPPTLAAAMNIPGG---AQDGVKRVGGRMVVQQADRVDVTALRQPKQHQYAQPVKE... 163
2 -7.0702y1b_A mol:protein length:128 PUTATIVE OUTER MEMBRANE PROTEIN, SIGNAL  ali model follow..  1.........................MGSMLSRSPVEPVQSTAPQPKAEPAKPKAPRATPVRIYTNAEELVGKPFRDLGEVSGDSCQASNQDSPPSIPTARKRMQINASKMKANAVVCIGSALNITAKLE..................................................................................................................................... 122
3 -6.8805h6s_A mol:protein length:481 Amidase  ali model follow..  15  13...........................................HMASAQETTRLTATEIRARISEGAASREEVVHRIDEFNALTNSFVELRADQVLEEARAADREFG-----STLGGPGVPLSIKDSYSVAGLHRTDGLPVNADVLDAQD-DVATARLRAAGG--LVLGHAGIPDLCIRWNSVSGLY----AVRNPRDLSRTGDAANVAAGFAT---------------IGLGGDLGGSIRVPAS................. 200
4 -6.8202ic7_A mol:protein length:185 Maltose transacetylase  ali model follow..  1..........................................MKSEKEKMLAGHLYNPADLELVKERERARRLVRLYNETLETEYDKRTGLLKELFGSTGERLDVCEVRIGDHCFIGPGVHIYTATHPLDPHERNSGLEYGKPVVIGHN------------GGRAVINPGVTIGDNAVI--SGAVVTKD------PANAVVGGNPAKVIKWLK................................................. 185
5 -6.6901ocx_A mol:protein length:182 MALTOSE O-ACETYLTRANSFERASE  ali model follow..  13  88......................................................................................................LDVCPIRIGDNCMLAPGVHIYTATHPIDPVARNSGAELGKPVTIGNN------------GGRAVINPGVTIGDNVVV--SGAVVTKD------PDNVVVGGNPARIIKKL.................................................. 182
6 -6.6903hjj_A mol:protein length:190 Maltose O-acetyltransferase  ali model follow..  11  94......................................................................................................LDVCEVRIGDHCMFAPGVHIYTATHPLHPVERNSGKEYGKPVKIGNN------------GGGAIINPGVSIGDNAVI--SGAVVTKD------PNNVVVGGNPAKVIKTIE................................................. 189
7 -6.5603ect_A mol:protein length:195 Hexapeptide-repeat containing-acetyltransferase  ali model follow..  14  92......................................................................................................LDGAPITIGDHVLIGPSTQFYTASHSLDYRRRQAWETICKPIVIEDD------------GGNVVINQGVTIGARSVV--ANSVVNQD------PPDTLVGGTPARILRSLKDPA.............................................. 190
8 -6.5503srt_A mol:protein length:188 Maltose O-acetyltransferase  ali model follow..  12  92......................................................................................................LDVCKIEIGDNVMLAPNVQIYTAYHPIDAQLRNSGIEYGSPVKIGDN------------GGGVIITPGITIGDNVVI--AGSVVTKD------PPNTVAVGNPCRVIKKIE................................................. 187
9 -6.3801kqa_A mol:protein length:203 GALACTOSIDE O-ACETYLTRANSFERASE  ali model follow..  10  91......................................................................................................VDDYTVTIGDNVLIAPNVTLSVTGHPVHHELRKNGEMYSFPITIGNN------------GSHVVINPGVTIGDNSVI--AGSIVTKD------PPNVVAAGVPCRVIREINDRD.............................................. 189
10 -6.3204dcl_A mol:protein length:207 Putative acetyltransferase SACOL2570  ali model follow..  11  90......................................................................................................MDGGQITIGDNVFIGPNCGFYTATHPLNFHHRNEGFEKAGPIHIGSN------------GGHVAVLPGVTIGEGSVI--AGSVVTKD------PPHSLAVGNPCKVVRKIDNDL.............................................. 188

FFAS is supported by the NIH grant R01-GM087218-01
1 2 7 7 1 2   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Friedberg I. and Godzik A Connecting the Protein Structure Universe by Using Sparse Recurring Fragments. Structure (Camb.) (2005) Aug;13(8):1213-24