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Query: gi|15675964|ref|NP_273082.1| hypothetical protein (NMB0016) [Neisseria meningitidis MC58], from N.meningitidis

Results of FFAS03 search in H.sapiens
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .
# Score Template Links and tools%idFirst MKNSFCGQFACCANGILLFFTEWLPMSLRTGILWRFERKVCLELVEMVRCRHECLISAYRQSAHPNLCISGGKNEICGLast
1 -6.890sp|Q9Y4G2|PKHM1_HUMAN Pleckstrin homology domain-containing family M member 1 OS=Homo sapiens GN=PLEKHM1 PE=1 SV=3  ali   25  228LSNPFRGLMKL-AMGI--LFCELSPLEFR--LYLSNEEHTCVENCSLLRCES---VGPAHSDGRFELVFSG....... 300
2 -6.870sp|P20916|MAG_HUMAN(removed signalp:1-19) Myelin-associated glycoprotein OS=Homo sapiens GN=MAG PE=1 SV=1  ali   14  17........VICTARNLYGAKSLELPFQGAHRLMWAKIGPVGAVVAFAILIAIVCYITQTRRKKNVTESPSFSAGD... 83
3 -6.840sp|P13798|ACPH_HUMAN Acylamino-acid-releasing enzyme OS=Homo sapiens GN=APEH PE=1 SV=4  ali   20  92.ENVSPGQAFWAPGDAGVVFVGWWHEPFRLGIRFCTNRRSALYYVDLIGGKCELLSDDSLAVSSPRLSPDQCR..... 163
4 -6.830sp|Q9Y2G1|MRF_HUMAN Myelin gene regulatory factor OS=Homo sapiens GN=MRF PE=1 SV=3  ali   16  128ITSQYCAPGDACRPGNFTYVSSGTPLHLSLTLQMNSSSPVSVVLCSLRSKEEPCEEGSLPQSLHTHQDTQGTSHR... 205
5 -6.600sp|Q9NXE8|CWC25_HUMAN Pre-mRNA-splicing factor CWC25 homolog OS=Homo sapiens GN=CWC25 PE=1 SV=1  ali follow..  20  2............GGGDLNLKKSWHPQTLRN--VWKAEQKHEAERKKIEELQRELREERAREEMQRYAEDVGAVKK... 65
6 -6.420sp|Q9NX94|OPA1L_HUMAN Outcome predictor in acute leukemia 1 OS=Homo sapiens GN=OPA1L PE=2 SV=2  ali follow..  20  26.TGHCCGQSQCCNYYYELFWLVWTIIIILSCCCVCHHRRAKHRLQAQQRQHEINLIAYREAHNYSALPFY........ 96
7 -6.370sp|P13667|PDIA4_HUMAN(removed signalp:1-24) Protein disulfide-isomerase A4 OS=Homo sapiens GN=PDIA4 PE=1 SV=2  ali   13  223...............LIEFYAPWCGHCKQLEPVYNYKGQKGLVIAKMDATANDVPSDRYKVEGFPTIYFEGGDRDL.. 300
8 -6.290sp|Q8TDY8|IGDC4_HUMAN(removed signalp:1-24) Immunoglobulin superfamily DCC subclass member 4 OS=Homo sapiens GN=IGDCC4 PE=2 SV=1  ali   32  8......GPFSRLQDVITL-LSDSLDMHSVTGII------VCLGLL----CLLACMCAGLRRSPHRES........... 62
9 -6.230sp|Q5VYM1|CI131_HUMAN Uncharacterized protein C9orf131 OS=Homo sapiens GN=C9orf131 PE=2 SV=3  ali   25  2.....................EWLLEDLLGGLLW--------QLTHALACRHCGSSCFQSPGNLVTLFLF........ 48
10 -6.200sp|Q9P2K2|TXD16_HUMAN(removed signalp:1-27) Thioredoxin domain-containing protein 16 OS=Homo sapiens GN=TXNDC16 PE=2 SV=4  ali   11  219LTEETFNATVMASDSIVLFYAGWQAVSMAFLQSYKLKGTSTMLLTRINCADWSDVCTKQNVTEFPIIKMKKGENPV.. 300

FFAS is supported by the NIH grant R01-GM087218-01
1 3 3 7 0 1   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Comparative analysis of protein domain organization. Genome Res. 2004 Mar;14(3):343-53.