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Query: gi|15675964|ref|NP_273082.1| hypothetical protein (NMB0016) [Neisseria meningitidis MC58], from N.meningitidis

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .
# Score Template Links and tools%idFirst MKNSFCGQFACCANGILLFFTEWLPMSLRTGILWRFERKVCLELVEMVRCRHECLISAYRQSAHPNLCISGGKNEICGLast
1 -5.780sp|Q9H1P6|CT085_HUMAN Uncharacterized protein C20orf85 OS=Homo sapiens GN=C20orf85 PE=2 SV=1  ali   17  19.......................VPQTTQGFIGWRSAVPGLNKCLELDDAIRSCKGAFARELCWPKQGVH........ 65
2 -5.600tr|B4DR81|B4DR81_HUMAN Uncharacterized protein OS=Homo sapiens GN=TCTN3 PE=2 SV=1  ali   14  10.......YVAIFGNADPAQKGGWTRILNRHCSISAINCTSCCLIPVSLEI--QVLWAYVGLLSNPQAHVSGVR..... 73
3 -5.460sp|Q8WXG6|MADD_HUMAN MAP kinase-activating death domain protein OS=Homo sapiens GN=MADD PE=1 SV=2  ali   20  7LKTGEGGLLQVTLEGINLKFMHNQVFIELNHIKKCNTVRGVFVLEEFVPEIKEVVSHKYKTPMAHEICYS........ 76
4 -5.440sp|Q96T59|CDRTF_HUMAN CMT1A duplicated region transcript 15 protein OS=Homo sapiens GN=CDRT15 PE=2 SV=1  ali   18  1.......MFSCCSESLFRRCRRRLIPHPRR--LSPVVIR....................................... 43
5 -5.430sp|Q6NUS6|TECT3_HUMAN Tectonic-3 OS=Homo sapiens GN=TCTN3 PE=2 SV=2  ali   14  11.......YVAIFGNADPAQKGGWTRILNRHCSISAINCTSCCLIPVSLEI--QVLWAYVGLLSNPQAHVSGVR..... 74
6 -5.380sp|Q5T699|CF183_HUMAN Putative uncharacterized protein C6orf183 OS=Homo sapiens GN=C6orf183 PE=5 SV=2  ali   14  9LLQYYTERIAQLAQSKYLHMLRWKRFCQHSKIMEQLYPLYKKQVGYIMQEYNDTLQRAERLSVARENFLMG....... 79
7 -5.160sp|Q6PKG0|LARP1_HUMAN La-related protein 1 OS=Homo sapiens GN=LARP1 PE=1 SV=2  ali   18  37.............NTLFRFWSFFLRDHFNKKMYEEFKQLALEDAKEGYRYGLECLFRYYSYGLEKKF........... 90
8 -5.130sp|Q96QT4|TRPM7_HUMAN Transient receptor potential cation channel subfamily M member 7 OS=Homo sapiens GN=TRPM7 PE=1 SV=1  ali   20  1.........................MSQKSWIESTLTKRECVYIIPSSKDPHRCL-PGCQICQQLVRCFCG....... 45
9 -5.050sp|Q8IUB5|WFD13_HUMAN Protein WFDC13 OS=Homo sapiens GN=WFDC13 PE=2 SV=1  ali   13  5...............................RVLKYILEPPPCISAPENCTHLC--TMQEDCEKGFQCCSSFCGIVC. 48
10 -4.990sp|Q659C4|LAR1B_HUMAN La-related protein 1B OS=Homo sapiens GN=LARP1B PE=1 SV=2  ali   18  38.............NTLFRFWSFFLRDHFNKKMYEEFRQLAWEDAKENYRYGLECLFRFYSYGLEKKF........... 91

FFAS is supported by the NIH grant R01-GM087218-01
1 3 3 7 0 0   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ye Y, Godzik A. Comparative analysis of protein domain organization. Genome Res. 2004 Mar;14(3):343-53.