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Query: gi|15675964|ref|NP_273082.1| hypothetical protein (NMB0016) [Neisseria meningitidis MC58], from N.meningitidis

Results of FFAS03 search in PDB1018
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50    .   60    .   70    .
# Score Template Links and tools%idFirst MKNSFCGQFACCANGILLFFTEWLPMSLRTGILWRFERKVCLELVEMVRCRHECLISAYRQSAHPNLCISGGKNEICGLast
1 -7.3703ir4_A mol:protein length:218 Glutaredoxin 2  ali model follow..  13  1............SNAMKLYIYDHCPFCVKARMIFG-LKNIPVELNVLQNDDEATPTRMIGQKMVPILQKDDSR..... 60
2 -7.2404kx4_A mol:protein length:217 Glutaredoxin-2  ali model follow..  15  1.............SAMKLYIYDHCPYCLKARMIFG-LKNIPVELHVLLNDDAETPTRMVGQKQVPILQKDDSR..... 59
3 -6.7804ksm_A mol:protein length:216 Glutaredoxin-2  ali model follow..  17  1..............AMKLYIYDHSPYSLKARMIFG-LKNIPVELHVLLNDDAETPTRMVGQKQVPILQKDDSR..... 58
4 -6.7101oj5_A mol:protein length:132 STEROID RECEPTOR COACTIVATOR 1A  ali model follow..  12  11TKQDTTGKIISIDTSSLRAAGRTGWEDLVRKCIYAFFQPQGREPSYARQLFQEVMTRGTASSPSYRFILNDGT..... 83
5 -6.6702gtt_A mol:protein length:450 Nucleoprotein  ali model follow..  21  236..........CSGLVSFTGFIKQINLTAREAILYFFHKNFEEEIRRMFEPGQET--SPYSSNAVGHV........... 308
6 -6.5704iao_C mol:protein length:159 Regulatory protein SIR4  ali model follow..  16  83.........................ILWRIADKTTYDKETITDLIEQGIPKHSYLSGNPLTSVTNDIC.......... 125
7 -6.3703c64_A mol:protein length:179 PfEMP1 variant 2 of strain MC  ali model follow..  28  7...............YNAFFWMWVHDMLIDSIKWRDEHGRCINKDKGKTCIKGC........................ 45
8 -6.3605ukb_D mol:protein length:423 Nucleocapsid  ali model follow..  24  226..........CAALATFGHLCKITGMSTEDVTTWILNREVADEMVQMMLPGQEI--SPYSSVKNPAF........... 298
9 -6.1505gmk_G mol:protein length:179 Pre-mRNA-splicing factor CWC25  ali model follow..  19  2............GSGDLNLLKSWNPKLMKN--VWETEQDLITEQQKLNTRLKE......................... 43
10 -6.0701dqc_A mol:protein length:74 TACHYCITIN  ali model follow..  16  24.....CCSFYNCHKCLARL------ENCPKGLHYNAYLKVC-DWPSKAGCTSVNKECHLWKTX............... 74

FFAS is supported by the NIH grant R01-GM087218-01
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Zmasek CM, Zhang Q, Ye Y, Godzik A. Surprising complexity of the ancestral apoptosis network. Genome Biol. 2007 Oct 24;8(10):R226 [Epub ahead of print]