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Query: sp|Q96T21|SEBP2_HUMAN Selenocysteine insertion sequence-binding protein 2 OS=Homo sapiens GN=SECISBP2 PE=1 SV=2, from NEW_HUMAN_DOMAINS

Results of FFAS03 search in HGM_OVER
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
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# Score Template Links and tools%idFirst MASEGPREPESEGIKLSADVKPFVPRFAGLNVAWLESSEACVFPSSAATYYPFVQEPPVTEQKIYTEDMAFGASTFPPQYLSSEITLHPYAYSPYTLDSTQNVYSVPGSQYLYNQPSCYRGFQTVKHRNENTCPLPQEMKALFKKKTYDLast
1 -3.820PB007843 JCVI_PEP_1096682172521 /source_dna_id=JCVI_ORF_1096682172520 /offset=0 /translation_table=11 /length=152 /full_length=152  ali follow..  12  53........GLEKEVPLQEVLTMIHTKEEGKQCSVKPKSPADELEAYFFDVFQ-------DEERVYPSDIK............................................................................... 109
2 -3.570PB000821 Q82P27_STRAW/1-209 PB000821; Pfam-B_821;  ali follow..  11  1MTLLGDKTASPYDTG-TPVPGPGGMAVTYEQVATGGLPVAGLERPVVPRLSAGLK.............................................................................................. 54
3 -3.430PB000520 Q9RVX4_DEIRA/1-194 PB000520; Pfam-B_520;  ali follow..  1MRVPRRSWP----RRFPPVLLSGAVTLKRMPQPVTALLAAMITPAVLISGAGTLIMSTSTRVGRATDRVR............................................................................... 67
4 -3.390HGC01056 gi|162659434|dbj|BAAX01000171.1|2.0 TMP01455;  ali follow..  23  205................LAHVRLLVPHTYG-----TTSASASVYACLYDIRFQAAR.............................................................................................. 238
5 -2.800PB012771 _Gut.Meta.Jp.0094636_ gi|162817068|dbj|BABA01027641.1||1 (+ 249:636~0 complete)  ali follow..  15  1MKTTTTNELPAEIMENGIHYT-YFPT--------CMLGDKSPNGKWASLYERYLQE............................................................................................. 52
6 -2.720HGC00106 gi|162841414|dbj|BABA01003295.1|1.0 TMP01000;  ali follow..  11  34.........SGNNLFCITGYSGLDPELDISNVQAPGVEYRDTYPT........................................................................................................ 69
7 -2.510PB076697 gi|160881556|ref|YP_001560524.1| hypothetical protein Cphy_3432 [Clostridium phytofermentans ISDg]gi|160430222|gb|ABX43785.1| conserved hypothetical protein [Clostridium phytofermentans ISDg]  ali follow..  41NVNQDLDEEDILDENIEQ-----KPVSSTTSISAKLGTVFSKTESVINESIPG................................................................................................ 88
8 -2.450HGC00164 gi|163636082|dbj|BABG01000191.1|4.0 TMP00833;  ali follow..  14  37..........RSGLDISPIIMPISQYNTPYRFLENRTDCFKGLPGLFADSLP................................................................................................. 79
9 -2.290PB048420 Q64S71_BACFR/1-165 PB048420; Pfam-B_48420;  ali follow..  15  8VRSENAE-VNGTYVDVSDPSTEFVSGEDDFRLVDPDSSLTRKEYEF....................................................................................................... 57
10 -2.040PB004718 Q5LIA4_BACFN/1-189 PB004718; Pfam-B_4718;  ali follow..  13  15TALPSFGGNGNGNGTDSLQATRYVTRATMYGVGYTNVFDTYLSPEY....................................................................................................... 61

FFAS is supported by the NIH grant R01-GM087218-01
1 3 3 6 4 4   jobs submitted since Jan 1, 2011
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Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Ginalski K, Grishin NV, Godzik A., Rychlewski L. Practical lessons from protein structure prediction. Nucleic Acids Res. 2005 Apr 1;33(6):1874-91.