current user: public

Please be advised that we have recently moved our server to a new location. We tried our best to fully test all functions on the website, but if something does not work for you please let us know.

Query: sp|A0AUZ9|CB067_HUMAN Uncharacterized protein C2orf67 OS=Homo sapiens GN=C2orf67 PE=1 SV=2, from NEW_HUMAN_DOMAINS

Results of FFAS03 search in NEW_HUMAN_DOMAINS
Master-slave alignment(slide right to see more) does not show gaps in the query sequence, use ali links to display alignment between query and templates.
    .   10    .   20    .   30    .   40    .   50
# Score Template Links and tools%idFirst AVNCSTEWKWLVDRARVGSRWTWLQAQISDLECKIQQLTDIHRQIRASKGILast
1 -42.600sp|A0AUZ9|CB067_HUMAN Uncharacterized protein C2orf67 OS=Homo sapiens GN=C2orf67 PE=1 SV=2  ali  100  1AVNCSTEWKWLVDRARVGSRWTWLQAQISDLECKIQQLTDIHRQIRASKGI 51
2 -7.690sp|O95071|UBR5_HUMAN E3 ubiquitin-protein ligase UBR5 OS=Homo sapiens GN=UBR5 PE=1 SV=2  ali   10  43.............EEKLIPTWNWMVSIMDSTEAQLRYGSAL.......... 70
3 -6.540sp|Q66K14|TBC9B_HUMAN TBC1 domain family member 9B OS=Homo sapiens GN=TBC1D9B PE=1 SV=3  ali   15  27..........GSSRKEITKHWEWLENNLLQTLSIFDSEEDITTFVKGK... 64
4 -6.320sp|Q6ZT07|TBCD9_HUMAN TBC1 domain family member 9 OS=Homo sapiens GN=TBC1D9 PE=1 SV=2  ali   18  26..........GGSRKEITEHWEWLEQNLLQTLSIFENENDITTFVRGK... 63
5 -6.300sp|Q0IIM8|TBC8B_HUMAN TBC1 domain family member 8B OS=Homo sapiens GN=TBC1D8B PE=2 SV=2  ali   18  25..........GANREEITKHWDWLEQNIMKTLSVFDSNEDITNFVQGK... 62
6 -5.620sp|Q02509|OC90_HUMAN Otoconin-90 OS=Homo sapiens GN=OC90 PE=2 SV=3  ali   40  42................LGPHFTWLQAVFTNF.................... 56
7 -5.520tr|F5H4H9|F5H4H9_HUMAN Uncharacterized protein OS=Homo sapiens GN=CCDC78 PE=4 SV=1  ali   24  78...........RERAQLLVRATMAEEQLSELQEYVDQHLGRWAE....... 110
8 -5.330tr|Q4VXL4|Q4VXL4_HUMAN HCG41426, isoform CRA_c OS=Homo sapiens GN=TACC2 PE=2 SV=1  ali   15  12...........EKLAVTNQKWTCMTVDLEADKQDYPQPSDLSTFVNETK.. 49
9 -5.200sp|O95759|TBCD8_HUMAN TBC1 domain family member 8 OS=Homo sapiens GN=TBC1D8 PE=1 SV=3  ali   13  80..........GATLEEINQHWDWLEQNLLHTLSVFDNKDDIASFVKGK... 117
10 -5.000sp|Q96SN8|CK5P2_HUMAN CDK5 regulatory subunit-associated protein 2 OS=Homo sapiens GN=CDK5RAP2 PE=1 SV=5  ali   25  24.....................TQLQSQILELQGELKEFKTCNKQLHQK... 50

FFAS is supported by the NIH grant R01-GM087218-01
1 3 2 7 4 5   jobs submitted since Jan 1, 2011
Comments and questions to: webmaster

Selected papers from Godzik Lab
Ying Zhang, Ines Thiele, Dana Weekes, Zhanwen Li, Lukasz Jaroszewski, Krzysztof Ginalski, Ashley Deacon, John Wooley, Scott Lesley, Ian Wilson, Bernhard Palsson, Andrei Osterman, Adam Godzik. Three-Dimensional Structural View of the Central Metabolic Network of Thermotoga maritima. Science. 2009 Sep 18;325(5947):1544-9.

Mayya Sedova, Mallika Iyer, Zhanwen Li, Lukasz Jaroszewski, Kai W Post, Thomas Hrabe, Eduard Porta-Pardo, Adam Godzik Cancer3D 2.0:: interactive analysis of 3D patterns of cancer mutations in cancer subsets. Nucleic Acids Research, gky1098 2018; Published on November 8 2018.

Li W, Jaroszewski L, Godzik A. Sequence clustering strategies improve remote homology recognitions while reducing search times. Protein Eng. 2002 Aug;15(8):643-9.